RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 SPATA25Q9BR10 227 aa14.92□□□□□ -0.02
SMPDL3A-202ENST00000487215 ELOVL1Q9BW60 279 aa14.92□□□□□ -0.02
SMPDL3A-202ENST00000487215 SELENOIQ9C0D9 397 aa14.92□□□□□ -0.02
SMPDL3A-202ENST00000487215 STUB1Q9UNE7 303 aa14.92□□□□□ -0.02
SMPDL3A-202ENST00000487215 FAM90A7PA6NKC0 464 aa14.91□□□□□ -0.02
SMPDL3A-202ENST00000487215 FAM90A23PA8MXZ1 464 aa14.91□□□□□ -0.02
SMPDL3A-202ENST00000487215 FCN1O00602 326 aa14.91□□□□□ -0.02
SMPDL3A-202ENST00000487215 RRHO14718 337 aa14.91□□□□□ -0.02
SMPDL3A-202ENST00000487215 MAS1P04201 325 aa14.91□□□□□ -0.02
SMPDL3A-202ENST00000487215 PLECQ15149 4684 aaKnown RBP14.91□□□□□ -0.02
SMPDL3A-202ENST00000487215 LY6G6FQ5SQ64 297 aa14.91□□□□□ -0.02
SMPDL3A-202ENST00000487215 SIGIRRQ6IA17 410 aa14.91□□□□□ -0.02
SMPDL3A-202ENST00000487215 CDH26Q8IXH8 852 aa14.91□□□□□ -0.02
SMPDL3A-202ENST00000487215 JAGN1Q8N5M9 183 aa14.91□□□□□ -0.02
SMPDL3A-202ENST00000487215 RHOVQ96L33 236 aa14.91□□□□□ -0.02
SMPDL3A-202ENST00000487215 MS4A10Q96PG2 267 aa14.91□□□□□ -0.02
SMPDL3A-202ENST00000487215 RSRP1Q9BUV0 290 aa14.91□□□□□ -0.02
SMPDL3A-202ENST00000487215 IFI27L2Q9H2X8 130 aa14.91□□□□□ -0.02
SMPDL3A-202ENST00000487215 RGS11O94810 467 aa14.9□□□□□ -0.02
SMPDL3A-202ENST00000487215 GLAP06280 429 aa14.9□□□□□ -0.02
SMPDL3A-202ENST00000487215 MGMTP16455 207 aa14.9□□□□□ -0.02
SMPDL3A-202ENST00000487215 FUT3P21217 361 aa14.9□□□□□ -0.02
SMPDL3A-202ENST00000487215 TPPP2P59282 170 aa14.9□□□□□ -0.02
SMPDL3A-202ENST00000487215 TAS2R43P59537 309 aa14.9□□□□□ -0.02
SMPDL3A-202ENST00000487215 TMEM267Q0VDI3 215 aaPredicted RBP14.9□□□□□ -0.02
SMPDL3A-202ENST00000487215 PLGLAQ15195 96 aa14.9□□□□□ -0.02
SMPDL3A-202ENST00000487215 ACTBL2Q562R1 376 aa14.9□□□□□ -0.02
SMPDL3A-202ENST00000487215 DMKNQ6E0U4 476 aaPredicted RBP14.9□□□□□ -0.02
SMPDL3A-202ENST00000487215 AWAT2Q6E213 333 aa14.9□□□□□ -0.02
SMPDL3A-202ENST00000487215 PPP1R27Q86WC6 154 aa14.9□□□□□ -0.02
SMPDL3A-202ENST00000487215 ANKRD13BQ86YJ7 626 aa14.9□□□□□ -0.02
SMPDL3A-202ENST00000487215 OR2AK2Q8NG84 335 aa14.9□□□□□ -0.02
SMPDL3A-202ENST00000487215 Q96M66 194 aa14.9□□□□□ -0.02
SMPDL3A-202ENST00000487215 FAM103A1Q9BTL3 118 aaKnown RBP14.9□□□□□ -0.02
SMPDL3A-202ENST00000487215 GAB2Q9UQC2 676 aa14.9□□□□□ -0.02
SMPDL3A-202ENST00000487215 ARPC1BO15143 372 aaKnown RBP14.89□□□□□ -0.03
SMPDL3A-202ENST00000487215 LALBAP00709 142 aa14.89□□□□□ -0.03
SMPDL3A-202ENST00000487215 ARSBP15848 533 aa14.89□□□□□ -0.03
SMPDL3A-202ENST00000487215 FSTP19883 344 aa14.89□□□□□ -0.03
SMPDL3A-202ENST00000487215 RPS11P62280 158 aaKnown RBP eCLIP14.89□□□□□ -0.03
SMPDL3A-202ENST00000487215 FAM71F2Q6NXP2 309 aa14.89□□□□□ -0.03
SMPDL3A-202ENST00000487215 UNQ5815/PRO19632Q6UWF5 114 aa14.89□□□□□ -0.03
SMPDL3A-202ENST00000487215 PACRGLQ8N7B6 248 aa14.89□□□□□ -0.03
SMPDL3A-202ENST00000487215 CYGBQ8WWM9 190 aa14.89□□□□□ -0.03
SMPDL3A-202ENST00000487215 THRSPQ92748 146 aa14.89□□□□□ -0.03
SMPDL3A-202ENST00000487215 GALMQ96C23 342 aa14.89□□□□□ -0.03
SMPDL3A-202ENST00000487215 CNOT2Q9NZN8 540 aaKnown RBP14.89□□□□□ -0.03
SMPDL3A-202ENST00000487215 NKX1-2Q9UD57 310 aaPredicted RBP14.89□□□□□ -0.03
SMPDL3A-202ENST00000487215 RNF150Q9ULK6 438 aa14.89□□□□□ -0.03
SMPDL3A-202ENST00000487215 ST8SIA5O15466 376 aa14.88□□□□□ -0.03
SMPDL3A-202ENST00000487215 PDCD6O75340 191 aa14.88□□□□□ -0.03
SMPDL3A-202ENST00000487215 CRTAPO75718 401 aaPredicted RBP14.88□□□□□ -0.03
SMPDL3A-202ENST00000487215 HAGHQ16775 308 aa14.88□□□□□ -0.03
SMPDL3A-202ENST00000487215 AKIRIN2Q53H80 203 aa14.88□□□□□ -0.03
SMPDL3A-202ENST00000487215 C6orf141Q5SZD1 244 aa14.88□□□□□ -0.03
SMPDL3A-202ENST00000487215 GLDNQ6ZMI3 551 aaPredicted RBP14.88□□□□□ -0.03
SMPDL3A-202ENST00000487215 DHRSXQ8N5I4 330 aa14.88□□□□□ -0.03
SMPDL3A-202ENST00000487215 LFNGQ8NES3 379 aa14.88□□□□□ -0.03
SMPDL3A-202ENST00000487215 SLA2Q9H6Q3 261 aa14.88□□□□□ -0.03
SMPDL3A-202ENST00000487215 CLEC2DQ9UHP7 191 aa14.88□□□□□ -0.03
SMPDL3A-202ENST00000487215 A0A1W2PPK0 400 aa14.87□□□□□ -0.03
SMPDL3A-202ENST00000487215 EFCAB10A6NFE3 127 aa14.87□□□□□ -0.03
SMPDL3A-202ENST00000487215 CT45A6P0DMU7 189 aa14.87□□□□□ -0.03
SMPDL3A-202ENST00000487215 CT45A5P0DMU8 189 aa14.87□□□□□ -0.03
SMPDL3A-202ENST00000487215 CT45A7P0DMV0 189 aa14.87□□□□□ -0.03
SMPDL3A-202ENST00000487215 HMGN3Q15651 99 aa14.87□□□□□ -0.03
SMPDL3A-202ENST00000487215 RPL39P5Q59GN2 51 aa14.87□□□□□ -0.03
SMPDL3A-202ENST00000487215 CLCC1Q96S66 551 aa14.87□□□□□ -0.03
SMPDL3A-202ENST00000487215 PIPOXQ9P0Z9 390 aa14.87□□□□□ -0.03
SMPDL3A-202ENST00000487215 TRBV5-7A0A0A0MS05 114 aa14.86□□□□□ -0.03
SMPDL3A-202ENST00000487215 OR5H14A6NHG9 310 aa14.86□□□□□ -0.03
SMPDL3A-202ENST00000487215 H0YJW9 148 aa14.86□□□□□ -0.03
SMPDL3A-202ENST00000487215 JTBO76095 146 aa14.86□□□□□ -0.03
SMPDL3A-202ENST00000487215 TRGV3P03979 118 aa14.86□□□□□ -0.03
SMPDL3A-202ENST00000487215 GSTP1P09211 210 aaKnown RBP14.86□□□□□ -0.03
SMPDL3A-202ENST00000487215 SNRPBP14678 240 aaKnown RBP14.86□□□□□ -0.03
SMPDL3A-202ENST00000487215 CD40LGP29965 261 aa14.86□□□□□ -0.03
SMPDL3A-202ENST00000487215 ST3GAL4Q11206 333 aa14.86□□□□□ -0.03
SMPDL3A-202ENST00000487215 ZFP41Q8N8Y5 198 aa14.86□□□□□ -0.03
SMPDL3A-202ENST00000487215 PGLYRP3Q96LB9 341 aa14.86□□□□□ -0.03
SMPDL3A-202ENST00000487215 OR14A2Q96R54 314 aa14.86□□□□□ -0.03
SMPDL3A-202ENST00000487215 RANGRFQ9HD47 186 aaPredicted RBP14.86□□□□□ -0.03
SMPDL3A-202ENST00000487215 STEAP1Q9UHE8 339 aa14.86□□□□□ -0.03
SMPDL3A-202ENST00000487215 RAB29O14966 203 aa14.85□□□□□ -0.03
SMPDL3A-202ENST00000487215 CA2P00918 260 aa14.85□□□□□ -0.03
SMPDL3A-202ENST00000487215 IFNA6P05013 189 aa14.85□□□□□ -0.03
SMPDL3A-202ENST00000487215 TFAP2AP05549 437 aa14.85□□□□□ -0.03
SMPDL3A-202ENST00000487215 CD1AP06126 327 aa14.85□□□□□ -0.03
SMPDL3A-202ENST00000487215 ZP3P21754 424 aa14.85□□□□□ -0.03
SMPDL3A-202ENST00000487215 MAPK3P27361 379 aaPredicted RBP14.85□□□□□ -0.03
SMPDL3A-202ENST00000487215 CAPGP40121 348 aa14.85□□□□□ -0.03
SMPDL3A-202ENST00000487215 ZNF562Q6V9R5 426 aa14.85□□□□□ -0.03
SMPDL3A-202ENST00000487215 NKAIN3Q8N8D7 197 aa14.85□□□□□ -0.03
SMPDL3A-202ENST00000487215 ZNF485Q8NCK3 441 aa14.85□□□□□ -0.03
SMPDL3A-202ENST00000487215 IL1F10Q8WWZ1 152 aa14.85□□□□□ -0.03
SMPDL3A-202ENST00000487215 GGHQ92820 318 aa14.85□□□□□ -0.03
SMPDL3A-202ENST00000487215 FAM46BQ96A09 425 aa14.85□□□□□ -0.03
SMPDL3A-202ENST00000487215 METTL1Q9UBP6 276 aaKnown RBP14.85□□□□□ -0.03
SMPDL3A-202ENST00000487215 GHRLQ9UBU3 117 aa14.85□□□□□ -0.03
SMPDL3A-202ENST00000487215 SLC23A1Q9UHI7 598 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms