RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 FAM90A9PA6NNJ1 464 aa9.95□□□□□ -0.82
PKP4-213ENST00000486254 SHISA9B4DS77 424 aa9.95□□□□□ -0.82
PKP4-213ENST00000486254 LGALS8O00214 317 aa9.95□□□□□ -0.82
PKP4-213ENST00000486254 WRBO00258 174 aa9.95□□□□□ -0.82
PKP4-213ENST00000486254 TOR1AO14656 332 aa9.95□□□□□ -0.82
PKP4-213ENST00000486254 LY86O95711 162 aa9.95□□□□□ -0.82
PKP4-213ENST00000486254 IGKV1-5P01602 117 aa9.95□□□□□ -0.82
PKP4-213ENST00000486254 AKR1C2P52895 323 aa9.95□□□□□ -0.82
PKP4-213ENST00000486254 LOXL3P58215 753 aa9.95□□□□□ -0.82
PKP4-213ENST00000486254 POLR2GP62487 172 aaKnown RBP eCLIP9.95□□□□□ -0.82
PKP4-213ENST00000486254 VAMP2P63027 116 aa9.95□□□□□ -0.82
PKP4-213ENST00000486254 MIDNQ504T8 468 aa9.95□□□□□ -0.82
PKP4-213ENST00000486254 SPRNQ5BIV9 151 aa9.95□□□□□ -0.82
PKP4-213ENST00000486254 TMEM252Q8N6L7 170 aa9.95□□□□□ -0.82
PKP4-213ENST00000486254 OR10A7Q8NGE5 316 aa9.95□□□□□ -0.82
PKP4-213ENST00000486254 OR52L2PQ8NGH6 319 aa9.95□□□□□ -0.82
PKP4-213ENST00000486254 MARC2Q969Z3 335 aa9.95□□□□□ -0.82
PKP4-213ENST00000486254 WFIKKN1Q96NZ8 548 aa9.95□□□□□ -0.82
PKP4-213ENST00000486254 PARP11Q9NR21 331 aa9.95□□□□□ -0.82
PKP4-213ENST00000486254 MMP26Q9NRE1 261 aa9.95□□□□□ -0.82
PKP4-213ENST00000486254 DYSFO75923 2080 aa9.95□□□□□ -0.82
PKP4-213ENST00000486254 BSNQ9UPA5 3926 aa9.94□□□□□ -0.82
PKP4-213ENST00000486254 SPENQ96T58 3664 aaKnown RBP9.94□□□□□ -0.82
PKP4-213ENST00000486254 TRAV38-1A0A0B4J264 116 aa9.94□□□□□ -0.82
PKP4-213ENST00000486254 TRGV8A0A0C4DH27 118 aa9.94□□□□□ -0.82
PKP4-213ENST00000486254 NKX6-3A6NJ46 265 aa9.94□□□□□ -0.82
PKP4-213ENST00000486254 ZNF729A6NN14 1252 aaPredicted RBP9.94□□□□□ -0.82
PKP4-213ENST00000486254 SCAF4O95104 1147 aaKnown RBP9.94□□□□□ -0.82
PKP4-213ENST00000486254 SPP1P10451 314 aa9.94□□□□□ -0.82
PKP4-213ENST00000486254 PPP1CCP36873 323 aaKnown RBP9.94□□□□□ -0.82
PKP4-213ENST00000486254 KIR2DS2P43631 304 aa9.94□□□□□ -0.82
PKP4-213ENST00000486254 SWI5Q1ZZU3 235 aa9.94□□□□□ -0.82
PKP4-213ENST00000486254 Q3ZCU0 254 aa9.94□□□□□ -0.82
PKP4-213ENST00000486254 AARDQ4LEZ3 155 aa9.94□□□□□ -0.82
PKP4-213ENST00000486254 MORN2Q502X0 79 aa9.94□□□□□ -0.82
PKP4-213ENST00000486254 CXorf66Q5JRM2 361 aaPredicted RBP9.94□□□□□ -0.82
PKP4-213ENST00000486254 DMRTC2Q8IXT2 367 aaPredicted RBP9.94□□□□□ -0.82
PKP4-213ENST00000486254 GALNT11Q8NCW6 608 aa9.94□□□□□ -0.82
PKP4-213ENST00000486254 LYPD6BQ8NI32 183 aa9.94□□□□□ -0.82
PKP4-213ENST00000486254 C5orf30Q96GV9 206 aa9.94□□□□□ -0.82
PKP4-213ENST00000486254 GAFA1Q96PS6 74 aa9.94□□□□□ -0.82
PKP4-213ENST00000486254 GPHA2Q96T91 129 aa9.94□□□□□ -0.82
PKP4-213ENST00000486254 MS4A5Q9H3V2 200 aa9.94□□□□□ -0.82
PKP4-213ENST00000486254 CALYQ9NYX4 217 aa9.94□□□□□ -0.82
PKP4-213ENST00000486254 CACNG5Q9UF02 275 aa9.94□□□□□ -0.82
PKP4-213ENST00000486254 SH3BGRL2Q9UJC5 107 aa9.94□□□□□ -0.82
PKP4-213ENST00000486254 DSPP15924 2871 aaKnown RBP9.94□□□□□ -0.82
PKP4-213ENST00000486254 SPTBN4Q9H254 2564 aa9.94□□□□□ -0.82
PKP4-213ENST00000486254 TRGV10A0A0A0MS01 117 aa9.93□□□□□ -0.82
PKP4-213ENST00000486254 A0A0G2JRQ6 117 aa9.93□□□□□ -0.82
PKP4-213ENST00000486254 KBTBD11-OT1A0A1B0GTJ5 212 aa9.93□□□□□ -0.82
PKP4-213ENST00000486254 SSSCA1O60232 199 aa9.93□□□□□ -0.82
PKP4-213ENST00000486254 MED6O75586 246 aa9.93□□□□□ -0.82
PKP4-213ENST00000486254 CLDN14O95500 239 aa9.93□□□□□ -0.82
PKP4-213ENST00000486254 CD80P33681 288 aa9.93□□□□□ -0.82
PKP4-213ENST00000486254 RPL23AP62750 156 aaKnown RBP9.93□□□□□ -0.82
PKP4-213ENST00000486254 TLE1Q04724 770 aa9.93□□□□□ -0.82
PKP4-213ENST00000486254 MEF2CQ06413 473 aaPredicted RBP9.93□□□□□ -0.82
PKP4-213ENST00000486254 EDDM3AQ14507 147 aa9.93□□□□□ -0.82
PKP4-213ENST00000486254 COMMD1Q8N668 190 aa9.93□□□□□ -0.82
PKP4-213ENST00000486254 RNASE11Q8TAA1 199 aaKnown RBP9.93□□□□□ -0.82
PKP4-213ENST00000486254 HIPK2Q9H2X6 1198 aa9.93□□□□□ -0.82
PKP4-213ENST00000486254 TAS2R3Q9NYW6 316 aa9.93□□□□□ -0.82
PKP4-213ENST00000486254 GNG12Q9UBI6 72 aa9.93□□□□□ -0.82
PKP4-213ENST00000486254 CLN8Q9UBY8 286 aa9.93□□□□□ -0.82
PKP4-213ENST00000486254 NDRG3Q9UGV2 375 aa9.93□□□□□ -0.82
PKP4-213ENST00000486254 ICE1Q9Y2F5 2266 aa9.93□□□□□ -0.82
PKP4-213ENST00000486254 ANKHD1Q8IWZ3 2542 aaKnown RBP9.92□□□□□ -0.82
PKP4-213ENST00000486254 IGSF23A1L1A6 192 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 B9A039 149 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 TRIM77I1YAP6 450 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 TXNL1O43396 289 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 SYNGR2O43760 224 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 DFFBO76075 338 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 CLDN1O95832 211 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 APOBEC3AP31941 199 aaPredicted RBP9.92□□□□□ -0.82
PKP4-213ENST00000486254 LPAR6P43657 344 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 CAV2P51636 162 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 F2RL1P55085 397 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 PAX9P55771 341 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 HOXA4Q00056 320 aaPredicted RBP9.92□□□□□ -0.82
PKP4-213ENST00000486254 STX12Q86Y82 276 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 FGFRL1Q8N441 504 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 ZNRF1Q8ND25 227 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 OR1S2Q8NGQ3 325 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 PRORYQ9H606 182 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 SAP30LQ9HAJ7 183 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 GFOD1Q9NXC2 390 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 COQ3Q9NZJ6 369 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 HSPB7Q9UBY9 170 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 STRAPQ9Y3F4 350 aaKnown RBP9.92□□□□□ -0.82
PKP4-213ENST00000486254 LINC00312Q9Y6C7 94 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 IGHV3OR15-7A0A075B7D8 119 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 ZNF705EA8MWA4 302 aaPredicted RBP9.92□□□□□ -0.82
PKP4-213ENST00000486254 UMAD1C9J7I0 102 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 TMEM178BH3BS89 294 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 RAB29O14966 203 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 NDUFA2O43678 99 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 CHST1O43916 411 aa9.92□□□□□ -0.82
PKP4-213ENST00000486254 TMEM50AO95807 157 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms