RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 ASB17Q8WXJ9 295 aa2.58□□□□□ -2
VPS13A-211ENST00000484581 UBE2WQ96B02 151 aa2.58□□□□□ -2
VPS13A-211ENST00000484581 TMA16Q96EY4 203 aaKnown RBP2.58□□□□□ -2
VPS13A-211ENST00000484581 MED18Q9BUE0 208 aa2.58□□□□□ -2
VPS13A-211ENST00000484581 MED28Q9H204 178 aa2.58□□□□□ -2
VPS13A-211ENST00000484581 XPNPEP1Q9NQW7 623 aa2.58□□□□□ -2
VPS13A-211ENST00000484581 CYTL1Q9NRR1 136 aa2.58□□□□□ -2
VPS13A-211ENST00000484581 SLC22A13Q9Y226 551 aa2.58□□□□□ -2
VPS13A-211ENST00000484581 FIS1Q9Y3D6 152 aa2.58□□□□□ -2
VPS13A-211ENST00000484581 LSM5Q9Y4Y9 91 aaKnown RBP2.58□□□□□ -2
VPS13A-211ENST00000484581 PHLDA3Q9Y5J5 127 aa2.58□□□□□ -2
VPS13A-211ENST00000484581 A0A1W2PQL4 384 aaPredicted RBP2.57□□□□□ -2
VPS13A-211ENST00000484581 A6NED7 52 aa2.57□□□□□ -2
VPS13A-211ENST00000484581 EVPLLA8MZ36 301 aa2.57□□□□□ -2
VPS13A-211ENST00000484581 SH2D1AO60880 128 aa2.57□□□□□ -2
VPS13A-211ENST00000484581 IGHV3-53P01767 116 aa2.57□□□□□ -2
VPS13A-211ENST00000484581 PFN1P07737 140 aaKnown RBP2.57□□□□□ -2
VPS13A-211ENST00000484581 CCR7P32248 378 aa2.57□□□□□ -2
VPS13A-211ENST00000484581 GABRA3P34903 492 aa2.57□□□□□ -2
VPS13A-211ENST00000484581 PMELP40967 661 aa2.57□□□□□ -2
VPS13A-211ENST00000484581 SNAP25P60880 206 aa2.57□□□□□ -2
VPS13A-211ENST00000484581 NAA20P61599 178 aa2.57□□□□□ -2
VPS13A-211ENST00000484581 LSM6P62312 80 aaKnown RBP2.57□□□□□ -2
VPS13A-211ENST00000484581 HLA-DRB3P79483 266 aa2.57□□□□□ -2
VPS13A-211ENST00000484581 BIKQ13323 160 aa2.57□□□□□ -2
VPS13A-211ENST00000484581 GNA13Q14344 377 aa2.57□□□□□ -2
VPS13A-211ENST00000484581 RSU1Q15404 277 aa2.57□□□□□ -2
VPS13A-211ENST00000484581 TMEM31Q5JXX7 168 aa2.57□□□□□ -2
VPS13A-211ENST00000484581 OR10K2Q6IF99 312 aa2.57□□□□□ -2
VPS13A-211ENST00000484581 LYZL2Q7Z4W2 148 aa2.57□□□□□ -2
VPS13A-211ENST00000484581 TRAPPC5Q8IUR0 188 aa2.57□□□□□ -2
VPS13A-211ENST00000484581 ZNF567Q8N184 647 aa2.57□□□□□ -2
VPS13A-211ENST00000484581 OR11G2Q8NGC1 345 aa2.57□□□□□ -2
VPS13A-211ENST00000484581 OTUB2Q96DC9 234 aa2.57□□□□□ -2
VPS13A-211ENST00000484581 RMI2Q96E14 147 aa2.57□□□□□ -2
VPS13A-211ENST00000484581 IMP4Q96G21 291 aaKnown RBP2.57□□□□□ -2
VPS13A-211ENST00000484581 ZNF2Q9BSG1 426 aaPredicted RBP2.57□□□□□ -2
VPS13A-211ENST00000484581 OR51I2Q9H344 312 aa2.57□□□□□ -2
VPS13A-211ENST00000484581 DNAJC12Q9UKB3 198 aa2.57□□□□□ -2
VPS13A-211ENST00000484581 ZNF337Q9Y3M9 751 aa2.57□□□□□ -2
VPS13A-211ENST00000484581 U3KQK5 164 aa2.57□□□□□ -2
VPS13A-211ENST00000484581 TRBV24-1A0A075B6N3 115 aa2.56□□□□□ -2
VPS13A-211ENST00000484581 A0A0B4J2C4 111 aa2.56□□□□□ -2
VPS13A-211ENST00000484581 C4orf51C9J302 202 aa2.56□□□□□ -2
VPS13A-211ENST00000484581 D6RAR5 112 aa2.56□□□□□ -2
VPS13A-211ENST00000484581 MRASO14807 208 aa2.56□□□□□ -2
VPS13A-211ENST00000484581 REG1AP05451 166 aa2.56□□□□□ -2
VPS13A-211ENST00000484581 INAFM2P0DMQ5 153 aa2.56□□□□□ -2
VPS13A-211ENST00000484581 OPRM1P35372 400 aa2.56□□□□□ -2
VPS13A-211ENST00000484581 CA7P43166 264 aa2.56□□□□□ -2
VPS13A-211ENST00000484581 OMPP47874 163 aa2.56□□□□□ -2
VPS13A-211ENST00000484581 REG1BP48304 166 aa2.56□□□□□ -2
VPS13A-211ENST00000484581 CCL7P80098 99 aa2.56□□□□□ -2
VPS13A-211ENST00000484581 AESQ08117 197 aa2.56□□□□□ -2
VPS13A-211ENST00000484581 OR2F1Q13607 317 aa2.56□□□□□ -2
VPS13A-211ENST00000484581 AKIRIN2Q53H80 203 aa2.56□□□□□ -2
VPS13A-211ENST00000484581 C10orf91Q5T1B1 145 aa2.56□□□□□ -2
VPS13A-211ENST00000484581 SPOPLQ6IQ16 392 aa2.56□□□□□ -2
VPS13A-211ENST00000484581 SFXN4Q6P4A7 337 aa2.56□□□□□ -2
VPS13A-211ENST00000484581 RNF182Q8N6D2 247 aa2.56□□□□□ -2
VPS13A-211ENST00000484581 SLC35G5Q96KT7 338 aa2.56□□□□□ -2
VPS13A-211ENST00000484581 OR51I1Q9H343 314 aa2.56□□□□□ -2
VPS13A-211ENST00000484581 OR5V1Q9UGF6 321 aa2.56□□□□□ -2
VPS13A-211ENST00000484581 WASHC3Q9Y3C0 194 aa2.56□□□□□ -2
VPS13A-211ENST00000484581 MRPS16Q9Y3D3 137 aaKnown RBP2.56□□□□□ -2
VPS13A-211ENST00000484581 LINC00588Q9Y4M8 146 aa2.56□□□□□ -2
VPS13A-211ENST00000484581 PCYT1BQ9Y5K3 369 aaPredicted RBP2.56□□□□□ -2
VPS13A-211ENST00000484581 OR51B4Q9Y5P0 310 aa2.56□□□□□ -2
VPS13A-211ENST00000484581 SNAPC4Q5SXM2 1469 aa2.56□□□□□ -2
VPS13A-211ENST00000484581 TMEM114B3SHH9 223 aa2.55□□□□□ -2
VPS13A-211ENST00000484581 EEF1E1O43324 174 aaKnown RBP2.55□□□□□ -2
VPS13A-211ENST00000484581 TCRBP04435 133 aa2.55□□□□□ -2
VPS13A-211ENST00000484581 IFNA6P05013 189 aa2.55□□□□□ -2
VPS13A-211ENST00000484581 CD36P16671 472 aa2.55□□□□□ -2
VPS13A-211ENST00000484581 CRABP2P29373 138 aa2.55□□□□□ -2
VPS13A-211ENST00000484581 OR10J1P30954 320 aa2.55□□□□□ -2
VPS13A-211ENST00000484581 PPP1CCP36873 323 aaKnown RBP2.55□□□□□ -2
VPS13A-211ENST00000484581 SULT1A1P50225 295 aa2.55□□□□□ -2
VPS13A-211ENST00000484581 IDH3GP51553 393 aaPredicted RBP2.55□□□□□ -2
VPS13A-211ENST00000484581 AKR1C2P52895 323 aa2.55□□□□□ -2
VPS13A-211ENST00000484581 CTBP2P56545 445 aa2.55□□□□□ -2
VPS13A-211ENST00000484581 RAB5BP61020 215 aa2.55□□□□□ -2
VPS13A-211ENST00000484581 FGF12P61328 243 aa2.55□□□□□ -2
VPS13A-211ENST00000484581 MRPS25P82663 173 aaKnown RBP2.55□□□□□ -2
VPS13A-211ENST00000484581 REEP5Q00765 189 aa2.55□□□□□ -2
VPS13A-211ENST00000484581 DEFA6Q01524 100 aa2.55□□□□□ -2
VPS13A-211ENST00000484581 EMX1Q04741 257 aaPredicted RBP2.55□□□□□ -2
VPS13A-211ENST00000484581 BSPH1Q075Z2 132 aa2.55□□□□□ -2
VPS13A-211ENST00000484581 ZNF638Q14966 1978 aaKnown RBP2.55□□□□□ -2
VPS13A-211ENST00000484581 OR8G1Q15617 311 aa2.55□□□□□ -2
VPS13A-211ENST00000484581 BATFQ16520 125 aa2.55□□□□□ -2
VPS13A-211ENST00000484581 FAM78BQ5VT40 261 aa2.55□□□□□ -2
VPS13A-211ENST00000484581 ZNF660Q6AZW8 331 aaPredicted RBP2.55□□□□□ -2
VPS13A-211ENST00000484581 GPR179Q6PRD1 2367 aa2.55□□□□□ -2
VPS13A-211ENST00000484581 TMEM136Q6ZRR5 245 aa2.55□□□□□ -2
VPS13A-211ENST00000484581 LRP11Q86VZ4 500 aa2.55□□□□□ -2
VPS13A-211ENST00000484581 ZFAND2AQ8N6M9 145 aa2.55□□□□□ -2
VPS13A-211ENST00000484581 HIST1H2BAQ96A08 127 aa2.55□□□□□ -2
VPS13A-211ENST00000484581 ANKRD36BP1Q96IX9 119 aa2.55□□□□□ -2
VPS13A-211ENST00000484581 PRAP1Q96NZ9 151 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms