RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 CRXO43186 299 aaPredicted RBP0.55□□□□□ -2.32
CCDC66-219ENST00000484441 MRPS14O60783 128 aaKnown RBP0.55□□□□□ -2.32
CCDC66-219ENST00000484441 ATF1P18846 271 aa0.55□□□□□ -2.32
CCDC66-219ENST00000484441 GADD45AP24522 165 aa0.55□□□□□ -2.32
CCDC66-219ENST00000484441 CRYBB3P26998 211 aa0.55□□□□□ -2.32
CCDC66-219ENST00000484441 SLC38A11Q08AI6 406 aa0.55□□□□□ -2.32
CCDC66-219ENST00000484441 TRMT12Q53H54 448 aaKnown RBP0.55□□□□□ -2.32
CCDC66-219ENST00000484441 DOLPP1Q86YN1 238 aa0.55□□□□□ -2.32
CCDC66-219ENST00000484441 TMEM75Q8N9X5 138 aa0.55□□□□□ -2.32
CCDC66-219ENST00000484441 BCL7BQ9BQE9 202 aa0.55□□□□□ -2.32
CCDC66-219ENST00000484441 MED18Q9BUE0 208 aa0.55□□□□□ -2.32
CCDC66-219ENST00000484441 IFT46Q9NQC8 304 aa0.55□□□□□ -2.32
CCDC66-219ENST00000484441 C8orf4Q9NR00 106 aa0.55□□□□□ -2.32
CCDC66-219ENST00000484441 TRGV5A0A0B4J1U4 118 aa0.54□□□□□ -2.32
CCDC66-219ENST00000484441 RFPL4AA6NLU0 287 aa0.54□□□□□ -2.32
CCDC66-219ENST00000484441 RFPL4AL1F8VTS6 287 aa0.54□□□□□ -2.32
CCDC66-219ENST00000484441 SLC17A3O00476 420 aa0.54□□□□□ -2.32
CCDC66-219ENST00000484441 ZW10O43264 779 aa0.54□□□□□ -2.32
CCDC66-219ENST00000484441 ZNF737O75373 536 aa0.54□□□□□ -2.32
CCDC66-219ENST00000484441 IGLV3-27P01718 113 aa0.54□□□□□ -2.32
CCDC66-219ENST00000484441 OR1E2P47887 323 aa0.54□□□□□ -2.32
CCDC66-219ENST00000484441 BSXQ3C1V8 233 aa0.54□□□□□ -2.32
CCDC66-219ENST00000484441 OR10K2Q6IF99 312 aa0.54□□□□□ -2.32
CCDC66-219ENST00000484441 MRPL52Q86TS9 123 aaKnown RBP0.54□□□□□ -2.32
CCDC66-219ENST00000484441 MAT2BQ9NZL9 334 aa0.54□□□□□ -2.32
CCDC66-219ENST00000484441 LINC00527Q9UJ94 153 aa0.54□□□□□ -2.32
CCDC66-219ENST00000484441 ARFGEF3Q5TH69 2177 aa0.54□□□□□ -2.32
CCDC66-219ENST00000484441 GOLGA8IPA6NC78 632 aa0.53□□□□□ -2.32
CCDC66-219ENST00000484441 IGHV1-69P01742 117 aa0.53□□□□□ -2.32
CCDC66-219ENST00000484441 CD7P09564 240 aa0.53□□□□□ -2.32
CCDC66-219ENST00000484441 IL9P15248 144 aa0.53□□□□□ -2.32
CCDC66-219ENST00000484441 SERPINB10P48595 397 aa0.53□□□□□ -2.32
CCDC66-219ENST00000484441 LINC00313P59037 77 aa0.53□□□□□ -2.32
CCDC66-219ENST00000484441 HOXC5Q00444 222 aa0.53□□□□□ -2.32
CCDC66-219ENST00000484441 GLO1Q04760 184 aa0.53□□□□□ -2.32
CCDC66-219ENST00000484441 NNATQ16517 81 aa0.53□□□□□ -2.32
CCDC66-219ENST00000484441 TRNT1Q96Q11 434 aaKnown RBP0.53□□□□□ -2.32
CCDC66-219ENST00000484441 MIEN1Q9BRT3 115 aa0.53□□□□□ -2.32
CCDC66-219ENST00000484441 HHLA3Q9XRX5 114 aa0.53□□□□□ -2.32
CCDC66-219ENST00000484441 STK38LQ9Y2H1 464 aa0.53□□□□□ -2.32
CCDC66-219ENST00000484441 SNX24Q9Y343 169 aa0.53□□□□□ -2.32
CCDC66-219ENST00000484441 BZW2Q9Y6E2 419 aaKnown RBP0.53□□□□□ -2.32
CCDC66-219ENST00000484441 ABCB11O95342 1321 aa0.53□□□□□ -2.32
CCDC66-219ENST00000484441 CACNA1BQ00975 2339 aa0.53□□□□□ -2.33
CCDC66-219ENST00000484441 BRWD1Q9NSI6 2320 aa0.53□□□□□ -2.33
CCDC66-219ENST00000484441 A0A1W2PQD3 144 aa0.52□□□□□ -2.33
CCDC66-219ENST00000484441 OR11H12B2RN74 326 aa0.52□□□□□ -2.33
CCDC66-219ENST00000484441 ORM2P19652 201 aa0.52□□□□□ -2.33
CCDC66-219ENST00000484441 GTF2BQ00403 316 aa0.52□□□□□ -2.33
CCDC66-219ENST00000484441 CNEP1R1Q8N9A8 125 aa0.52□□□□□ -2.33
CCDC66-219ENST00000484441 CDRT4Q8N9R6 151 aa0.52□□□□□ -2.33
CCDC66-219ENST00000484441 OR11H2Q8NH07 326 aa0.52□□□□□ -2.33
CCDC66-219ENST00000484441 CHST5Q9GZS9 411 aa0.52□□□□□ -2.33
CCDC66-219ENST00000484441 NXT1Q9UKK6 140 aaKnown RBP0.52□□□□□ -2.33
CCDC66-219ENST00000484441 IGHV3-64A0A075B6Q5 118 aa0.51□□□□□ -2.33
CCDC66-219ENST00000484441 PGLYRP1O75594 196 aaPredicted RBP0.51□□□□□ -2.33
CCDC66-219ENST00000484441 GPX2P18283 190 aa0.51□□□□□ -2.33
CCDC66-219ENST00000484441 PTNP21246 168 aa0.51□□□□□ -2.33
CCDC66-219ENST00000484441 OR10A3P58181 314 aa0.51□□□□□ -2.33
CCDC66-219ENST00000484441 ACTBP60709 375 aa0.51□□□□□ -2.33
CCDC66-219ENST00000484441 DYNLL1P63167 89 aaKnown RBP0.51□□□□□ -2.33
CCDC66-219ENST00000484441 ACTG1P63261 375 aa0.51□□□□□ -2.33
CCDC66-219ENST00000484441 C18orf21Q32NC0 220 aaPredicted RBP0.51□□□□□ -2.33
CCDC66-219ENST00000484441 TMEM42Q69YG0 159 aa0.51□□□□□ -2.33
CCDC66-219ENST00000484441 PLCZ1Q86YW0 608 aa0.51□□□□□ -2.33
CCDC66-219ENST00000484441 OR51H1Q8NH63 302 aa0.51□□□□□ -2.33
CCDC66-219ENST00000484441 CLDND2Q8NHS1 167 aa0.51□□□□□ -2.33
CCDC66-219ENST00000484441 TAMM41Q96BW9 452 aa0.51□□□□□ -2.33
CCDC66-219ENST00000484441 ABHD14BQ96IU4 210 aa0.51□□□□□ -2.33
CCDC66-219ENST00000484441 ACBD6Q9BR61 282 aa0.51□□□□□ -2.33
CCDC66-219ENST00000484441 GNB1LQ9BYB4 327 aa0.51□□□□□ -2.33
CCDC66-219ENST00000484441 MED9Q9NWA0 146 aa0.51□□□□□ -2.33
CCDC66-219ENST00000484441 A0A1B0GX12 115 aa0.5□□□□□ -2.33
CCDC66-219ENST00000484441 GPR171O14626 319 aa0.5□□□□□ -2.33
CCDC66-219ENST00000484441 CYTH3O43739 400 aa0.5□□□□□ -2.33
CCDC66-219ENST00000484441 UCHL1P09936 223 aa0.5□□□□□ -2.33
CCDC66-219ENST00000484441 SLC35E3Q7Z769 313 aa0.5□□□□□ -2.33
CCDC66-219ENST00000484441 PDCL2Q8N4E4 241 aa0.5□□□□□ -2.33
CCDC66-219ENST00000484441 NKX6-2Q9C056 277 aaPredicted RBP0.5□□□□□ -2.33
CCDC66-219ENST00000484441 VCX3BQ9H321 246 aa0.5□□□□□ -2.33
CCDC66-219ENST00000484441 DNAJC12Q9UKB3 198 aa0.5□□□□□ -2.33
CCDC66-219ENST00000484441 NCOA6Q14686 2063 aaPredicted RBP0.49□□□□□ -2.33
CCDC66-219ENST00000484441 MEIKINA0A087WXM9 373 aa0.49□□□□□ -2.33
CCDC66-219ENST00000484441 PHYHO14832 338 aa0.49□□□□□ -2.33
CCDC66-219ENST00000484441 STK16O75716 305 aa0.49□□□□□ -2.33
CCDC66-219ENST00000484441 CRYBA1P05813 215 aa0.49□□□□□ -2.33
CCDC66-219ENST00000484441 CCR7P32248 378 aa0.49□□□□□ -2.33
CCDC66-219ENST00000484441 AKR1C3P42330 323 aa0.49□□□□□ -2.33
CCDC66-219ENST00000484441 SULT1A2P50226 295 aa0.49□□□□□ -2.33
CCDC66-219ENST00000484441 FAM3AP98173 230 aa0.49□□□□□ -2.33
CCDC66-219ENST00000484441 XRCC4Q13426 336 aa0.49□□□□□ -2.33
CCDC66-219ENST00000484441 TMEM155Q4W5P6 130 aa0.49□□□□□ -2.33
CCDC66-219ENST00000484441 SMCR5Q8TEV8 140 aa0.49□□□□□ -2.33
CCDC66-219ENST00000484441 CATSPER2Q96P56 530 aa0.49□□□□□ -2.33
CCDC66-219ENST00000484441 HINT2Q9BX68 163 aa0.49□□□□□ -2.33
CCDC66-219ENST00000484441 MED28Q9H204 178 aa0.49□□□□□ -2.33
CCDC66-219ENST00000484441 RBMX2Q9Y388 322 aaKnown RBP0.49□□□□□ -2.33
CCDC66-219ENST00000484441 HEATR5BQ9P2D3 2071 aa0.49□□□□□ -2.33
CCDC66-219ENST00000484441 RCVRNP35243 200 aa0.48□□□□□ -2.33
CCDC66-219ENST00000484441 DAPP51397 102 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms