RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 OR1S1Q8NH92 325 aa11.6□□□□□ -0.55
CLK3-204ENST00000483723 ZFP57Q9NU63 452 aa11.6□□□□□ -0.55
CLK3-204ENST00000483723 IDI2-AS1Q9NZ38 188 aa11.6□□□□□ -0.55
CLK3-204ENST00000483723 CTSZQ9UBR2 303 aa11.6□□□□□ -0.55
CLK3-204ENST00000483723 ADAM20O43506 726 aa11.6□□□□□ -0.55
CLK3-204ENST00000483723 NDUFB3O43676 98 aa11.6□□□□□ -0.55
CLK3-204ENST00000483723 PROP1O75360 226 aa11.6□□□□□ -0.55
CLK3-204ENST00000483723 DEDDO75618 318 aa11.6□□□□□ -0.55
CLK3-204ENST00000483723 IGKV1-39P01597 117 aa11.6□□□□□ -0.55
CLK3-204ENST00000483723 MBPP02686 304 aaPredicted RBP11.6□□□□□ -0.55
CLK3-204ENST00000483723 IGKV1D-39P04432 117 aa11.6□□□□□ -0.55
CLK3-204ENST00000483723 SOD3P08294 240 aa11.6□□□□□ -0.55
CLK3-204ENST00000483723 SLC25A6P12236 298 aa11.6□□□□□ -0.55
CLK3-204ENST00000483723 NDUFB7P17568 137 aa11.6□□□□□ -0.55
CLK3-204ENST00000483723 NEU4Q8WWR8 484 aaPredicted RBP11.6□□□□□ -0.55
CLK3-204ENST00000483723 RRNAD1Q96FB5 475 aaKnown RBP11.6□□□□□ -0.55
CLK3-204ENST00000483723 SPIN2AQ99865 258 aa11.6□□□□□ -0.55
CLK3-204ENST00000483723 SPIN2BQ9BPZ2 258 aa11.6□□□□□ -0.55
CLK3-204ENST00000483723 LIN7CQ9NUP9 197 aaKnown RBP11.6□□□□□ -0.55
CLK3-204ENST00000483723 SDHAF2Q9NX18 166 aa11.6□□□□□ -0.55
CLK3-204ENST00000483723 GNG12Q9UBI6 72 aa11.6□□□□□ -0.55
CLK3-204ENST00000483723 ANKHD1Q8IWZ3 2542 aaKnown RBP11.6□□□□□ -0.55
CLK3-204ENST00000483723 PKDREJQ9NTG1 2253 aa11.59□□□□□ -0.55
CLK3-204ENST00000483723 K7EPK0 472 aa11.59□□□□□ -0.55
CLK3-204ENST00000483723 CFDP00746 253 aaPredicted RBP11.59□□□□□ -0.55
CLK3-204ENST00000483723 IGHV2-70P01814 119 aa11.59□□□□□ -0.55
CLK3-204ENST00000483723 SERPINE2P07093 398 aa11.59□□□□□ -0.55
CLK3-204ENST00000483723 ZNF134P52741 427 aa11.59□□□□□ -0.55
CLK3-204ENST00000483723 RPL30P62888 115 aaKnown RBP11.59□□□□□ -0.55
CLK3-204ENST00000483723 NDUFA5Q16718 116 aa11.59□□□□□ -0.55
CLK3-204ENST00000483723 LRRC10Q5BKY1 277 aa11.59□□□□□ -0.55
CLK3-204ENST00000483723 FAM71E2Q8N5Q1 922 aa11.59□□□□□ -0.55
CLK3-204ENST00000483723 INO80EQ8NBZ0 244 aaPredicted RBP11.59□□□□□ -0.55
CLK3-204ENST00000483723 ZNF439Q8NDP4 499 aa11.59□□□□□ -0.55
CLK3-204ENST00000483723 DCUN1D4Q92564 292 aa11.59□□□□□ -0.55
CLK3-204ENST00000483723 LSM10Q969L4 123 aaKnown RBP11.59□□□□□ -0.55
CLK3-204ENST00000483723 ABHD14BQ96IU4 210 aa11.59□□□□□ -0.55
CLK3-204ENST00000483723 AQP10Q96PS8 301 aa11.59□□□□□ -0.55
CLK3-204ENST00000483723 C19orf12Q9NSK7 152 aa11.59□□□□□ -0.55
CLK3-204ENST00000483723 LPAR3Q9UBY5 353 aa11.59□□□□□ -0.55
CLK3-204ENST00000483723 PSG11Q9UQ72 335 aa11.59□□□□□ -0.55
CLK3-204ENST00000483723 DVL1O14640 695 aa11.58□□□□□ -0.56
CLK3-204ENST00000483723 ST8SIA5O15466 376 aa11.58□□□□□ -0.56
CLK3-204ENST00000483723 PITX3O75364 302 aa11.58□□□□□ -0.56
CLK3-204ENST00000483723 RLN2P04090 185 aa11.58□□□□□ -0.56
CLK3-204ENST00000483723 OMGP23515 440 aa11.58□□□□□ -0.56
CLK3-204ENST00000483723 BRWD1-AS2P59051 145 aa11.58□□□□□ -0.56
CLK3-204ENST00000483723 LTC4SQ16873 150 aa11.58□□□□□ -0.56
CLK3-204ENST00000483723 HSD17B10Q99714 261 aaKnown RBP11.58□□□□□ -0.56
CLK3-204ENST00000483723 C11orf1Q9H5F2 150 aa11.58□□□□□ -0.56
CLK3-204ENST00000483723 RPUSD1Q9UJJ7 312 aaKnown RBP11.58□□□□□ -0.56
CLK3-204ENST00000483723 SMG1Q96Q15 3661 aaKnown RBP11.58□□□□□ -0.56
CLK3-204ENST00000483723 LYNX1G3V0Z9 82 aa11.57□□□□□ -0.56
CLK3-204ENST00000483723 ST8SIA3O43173 380 aa11.57□□□□□ -0.56
CLK3-204ENST00000483723 BCL2L11O43521 198 aa11.57□□□□□ -0.56
CLK3-204ENST00000483723 GOSR1O95249 250 aa11.57□□□□□ -0.56
CLK3-204ENST00000483723 IFNA7P01567 189 aa11.57□□□□□ -0.56
CLK3-204ENST00000483723 PRB1P04280 392 aa11.57□□□□□ -0.56
CLK3-204ENST00000483723 LYNX1P0DP58 116 aa11.57□□□□□ -0.56
CLK3-204ENST00000483723 RAB7AP51149 207 aa11.57□□□□□ -0.56
CLK3-204ENST00000483723 RPL31P62899 125 aaKnown RBP11.57□□□□□ -0.56
CLK3-204ENST00000483723 ID3Q02535 119 aa11.57□□□□□ -0.56
CLK3-204ENST00000483723 CATR1Q13166 79 aa11.57□□□□□ -0.56
CLK3-204ENST00000483723 ZNF273Q14593 569 aa11.57□□□□□ -0.56
CLK3-204ENST00000483723 CT45A1Q5HYN5 189 aa11.57□□□□□ -0.56
CLK3-204ENST00000483723 UTF1Q5T230 341 aa11.57□□□□□ -0.56
CLK3-204ENST00000483723 TMEM200BQ69YZ2 307 aa11.57□□□□□ -0.56
CLK3-204ENST00000483723 SLC51BQ86UW2 128 aa11.57□□□□□ -0.56
CLK3-204ENST00000483723 ZNF843Q8N446 348 aa11.57□□□□□ -0.56
CLK3-204ENST00000483723 CT45A3Q8NHU0 189 aa11.57□□□□□ -0.56
CLK3-204ENST00000483723 GPR146Q96CH1 333 aa11.57□□□□□ -0.56
CLK3-204ENST00000483723 IFI27L2Q9H2X8 130 aa11.57□□□□□ -0.56
CLK3-204ENST00000483723 ADGRG4Q8IZF6 3080 aa11.57□□□□□ -0.56
CLK3-204ENST00000483723 A0A1B0GU03 582 aa11.57□□□□□ -0.56
CLK3-204ENST00000483723 MSGN1A6NI15 193 aa11.57□□□□□ -0.56
CLK3-204ENST00000483723 MMP23AO75900 390 aa11.57□□□□□ -0.56
CLK3-204ENST00000483723 C1QL1O75973 258 aa11.57□□□□□ -0.56
CLK3-204ENST00000483723 CLDN1O95832 211 aa11.57□□□□□ -0.56
CLK3-204ENST00000483723 AP2S1P53680 142 aaPredicted RBP11.57□□□□□ -0.56
CLK3-204ENST00000483723 S100A10P60903 97 aa11.57□□□□□ -0.56
CLK3-204ENST00000483723 EXOSC2Q13868 293 aaKnown RBP11.57□□□□□ -0.56
CLK3-204ENST00000483723 DMBX1Q8NFW5 382 aa11.57□□□□□ -0.56
CLK3-204ENST00000483723 ITGB1BP2Q9UKP3 347 aa11.57□□□□□ -0.56
CLK3-204ENST00000483723 POMT1Q9Y6A1 747 aa11.57□□□□□ -0.56
CLK3-204ENST00000483723 A0A0G2JRQ6 117 aa11.56□□□□□ -0.56
CLK3-204ENST00000483723 KANTRA0A1W2PQU2 76 aa11.56□□□□□ -0.56
CLK3-204ENST00000483723 A6NNC1 897 aa11.56□□□□□ -0.56
CLK3-204ENST00000483723 E5RGE8 158 aa11.56□□□□□ -0.56
CLK3-204ENST00000483723 SLC31A2O15432 143 aa11.56□□□□□ -0.56
CLK3-204ENST00000483723 KCNAB3O43448 404 aa11.56□□□□□ -0.56
CLK3-204ENST00000483723 IGKV1-5P01602 117 aa11.56□□□□□ -0.56
CLK3-204ENST00000483723 HKR1P10072 659 aa11.56□□□□□ -0.56
CLK3-204ENST00000483723 ZNF16P17020 682 aaPredicted RBP11.56□□□□□ -0.56
CLK3-204ENST00000483723 DUTP33316 252 aaKnown RBP11.56□□□□□ -0.56
CLK3-204ENST00000483723 LPAR6P43657 344 aa11.56□□□□□ -0.56
CLK3-204ENST00000483723 GPR12P47775 334 aa11.56□□□□□ -0.56
CLK3-204ENST00000483723 DLX6P56179 175 aa11.56□□□□□ -0.56
CLK3-204ENST00000483723 SMCO1Q147U7 214 aa11.56□□□□□ -0.56
CLK3-204ENST00000483723 Q3ZCU0 254 aa11.56□□□□□ -0.56
CLK3-204ENST00000483723 HEPN1Q6WQI6 88 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms