RNA–Protein interactions for RNA: ENST00000481800.1

COL9A3-212, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-212ENST00000481800 GHITMQ9H3K2 345 aa13.89□□□□□ -0.19
COL9A3-212ENST00000481800 Q9N2K0 584 aa13.89□□□□□ -0.19
COL9A3-212ENST00000481800 ZNF107Q9UII5 783 aaPredicted RBP13.89□□□□□ -0.19
COL9A3-212ENST00000481800 DUS4LO95620 317 aaKnown RBP13.88□□□□□ -0.19
COL9A3-212ENST00000481800 RAB3BP20337 219 aa13.88□□□□□ -0.19
COL9A3-212ENST00000481800 GALP22466 123 aa13.88□□□□□ -0.19
COL9A3-212ENST00000481800 CXorf66Q5JRM2 361 aaPredicted RBP13.88□□□□□ -0.19
COL9A3-212ENST00000481800 FOXB2Q5VYV0 432 aa13.88□□□□□ -0.19
COL9A3-212ENST00000481800 EDARADDQ8WWZ3 215 aa13.88□□□□□ -0.19
COL9A3-212ENST00000481800 RAB3CQ96E17 227 aa13.88□□□□□ -0.19
COL9A3-212ENST00000481800 HSPB9Q9BQS6 159 aa13.88□□□□□ -0.19
COL9A3-212ENST00000481800 KIAA1456Q9P272 454 aa13.88□□□□□ -0.19
COL9A3-212ENST00000481800 IFITM5A6NNB3 132 aa13.87□□□□□ -0.19
COL9A3-212ENST00000481800 ITGB1BP1O14713 200 aa13.87□□□□□ -0.19
COL9A3-212ENST00000481800 LDLRAD4O15165 306 aa13.87□□□□□ -0.19
COL9A3-212ENST00000481800 NBR2O15453 112 aa13.87□□□□□ -0.19
COL9A3-212ENST00000481800 SCTP09683 121 aa13.87□□□□□ -0.19
COL9A3-212ENST00000481800 CD3GP09693 182 aa13.87□□□□□ -0.19
COL9A3-212ENST00000481800 OR5H8P0DN80 308 aa13.87□□□□□ -0.19
COL9A3-212ENST00000481800 GADD45AP24522 165 aa13.87□□□□□ -0.19
COL9A3-212ENST00000481800 PSMB9P28065 219 aa13.87□□□□□ -0.19
COL9A3-212ENST00000481800 OR10A3P58181 314 aa13.87□□□□□ -0.19
COL9A3-212ENST00000481800 FOXE3Q13461 319 aa13.87□□□□□ -0.19
COL9A3-212ENST00000481800 RPL39P5Q59GN2 51 aa13.87□□□□□ -0.19
COL9A3-212ENST00000481800 PLAC9Q5JTB6 97 aa13.87□□□□□ -0.19
COL9A3-212ENST00000481800 C22orf42Q6IC83 251 aa13.87□□□□□ -0.19
COL9A3-212ENST00000481800 C8orf86Q6ZUL3 223 aa13.87□□□□□ -0.19
COL9A3-212ENST00000481800 ZNF695Q8IW36 515 aa13.87□□□□□ -0.19
COL9A3-212ENST00000481800 FCGR1BQ92637 280 aa13.87□□□□□ -0.19
COL9A3-212ENST00000481800 YTHDF1Q9BYJ9 559 aaKnown RBP13.87□□□□□ -0.19
COL9A3-212ENST00000481800 OR1A1Q9P1Q5 309 aa13.87□□□□□ -0.19
COL9A3-212ENST00000481800 TRDCB7Z8K6 153 aa13.86□□□□□ -0.19
COL9A3-212ENST00000481800 RPLP1P05386 114 aaKnown RBP13.86□□□□□ -0.19
COL9A3-212ENST00000481800 ELANEP08246 267 aa13.86□□□□□ -0.19
COL9A3-212ENST00000481800 MYCNOSP40205 109 aa13.86□□□□□ -0.19
COL9A3-212ENST00000481800 THBS3P49746 956 aa13.86□□□□□ -0.19
COL9A3-212ENST00000481800 PLA2G7Q13093 441 aa13.86□□□□□ -0.19
COL9A3-212ENST00000481800 UBE2UQ5VVX9 321 aa13.86□□□□□ -0.19
COL9A3-212ENST00000481800 FAM131AQ6UXB0 335 aa13.86□□□□□ -0.19
COL9A3-212ENST00000481800 C18orf65Q6ZTR6 163 aa13.86□□□□□ -0.19
COL9A3-212ENST00000481800 MRPL41Q8IXM3 137 aaKnown RBP13.86□□□□□ -0.19
COL9A3-212ENST00000481800 SPARTQ8N0X7 666 aa13.86□□□□□ -0.19
COL9A3-212ENST00000481800 LINC00482Q8N8I6 264 aa13.86□□□□□ -0.19
COL9A3-212ENST00000481800 MRAPQ8TCY5 172 aa13.86□□□□□ -0.19
COL9A3-212ENST00000481800 ABHD14BQ96IU4 210 aa13.86□□□□□ -0.19
COL9A3-212ENST00000481800 RITA1Q96K30 269 aa13.86□□□□□ -0.19
COL9A3-212ENST00000481800 GPR61Q9BZJ8 451 aa13.86□□□□□ -0.19
COL9A3-212ENST00000481800 PARP12Q9H0J9 701 aaKnown RBP13.86□□□□□ -0.19
COL9A3-212ENST00000481800 C11orf54Q9H0W9 315 aaPredicted RBP13.86□□□□□ -0.19
COL9A3-212ENST00000481800 SHISA3A0PJX4 238 aa13.85□□□□□ -0.19
COL9A3-212ENST00000481800 METTL21EPA6NDL7 271 aa13.85□□□□□ -0.19
COL9A3-212ENST00000481800 OR5H14A6NHG9 310 aa13.85□□□□□ -0.19
COL9A3-212ENST00000481800 H7C2Y5 167 aa13.85□□□□□ -0.19
COL9A3-212ENST00000481800 IGF1P05019 195 aa13.85□□□□□ -0.19
COL9A3-212ENST00000481800 GSTP1P09211 210 aaKnown RBP13.85□□□□□ -0.19
COL9A3-212ENST00000481800 CT45A6P0DMU7 189 aa13.85□□□□□ -0.19
COL9A3-212ENST00000481800 CT45A5P0DMU8 189 aa13.85□□□□□ -0.19
COL9A3-212ENST00000481800 CT45A7P0DMV0 189 aa13.85□□□□□ -0.19
COL9A3-212ENST00000481800 CNTFRP26992 372 aa13.85□□□□□ -0.19
COL9A3-212ENST00000481800 MC5RP33032 325 aa13.85□□□□□ -0.19
COL9A3-212ENST00000481800 C5orf64Q2M2E5 130 aa13.85□□□□□ -0.19
COL9A3-212ENST00000481800 LIN54Q6MZP7 749 aa13.85□□□□□ -0.19
COL9A3-212ENST00000481800 ETV3LQ6ZN32 361 aa13.85□□□□□ -0.19
COL9A3-212ENST00000481800 OR10R2Q8NGX6 335 aa13.85□□□□□ -0.19
COL9A3-212ENST00000481800 KCTD7Q96MP8 289 aa13.85□□□□□ -0.19
COL9A3-212ENST00000481800 CHCHD6Q9BRQ6 235 aa13.85□□□□□ -0.19
COL9A3-212ENST00000481800 AURKAIP1Q9NWT8 199 aaPredicted RBP13.85□□□□□ -0.19
COL9A3-212ENST00000481800 ZNF221Q9UK13 617 aa13.85□□□□□ -0.19
COL9A3-212ENST00000481800 A0A075B6Q4 140 aa13.84□□□□□ -0.19
COL9A3-212ENST00000481800 IGHG4P01861 327 aa13.84□□□□□ -0.19
COL9A3-212ENST00000481800 HLA-DRB1P01911 266 aa13.84□□□□□ -0.19
COL9A3-212ENST00000481800 RAB6AP20340 208 aa13.84□□□□□ -0.19
COL9A3-212ENST00000481800 SERPINB10P48595 397 aa13.84□□□□□ -0.19
COL9A3-212ENST00000481800 KIR2DS1Q14954 304 aa13.84□□□□□ -0.19
COL9A3-212ENST00000481800 PLGLAQ15195 96 aa13.84□□□□□ -0.19
COL9A3-212ENST00000481800 MOGAT2Q3SYC2 334 aa13.84□□□□□ -0.19
COL9A3-212ENST00000481800 GLDNQ6ZMI3 551 aaPredicted RBP13.84□□□□□ -0.19
COL9A3-212ENST00000481800 LCNL1Q6ZST4 164 aa13.84□□□□□ -0.19
COL9A3-212ENST00000481800 NPBQ8NG41 125 aa13.84□□□□□ -0.19
COL9A3-212ENST00000481800 OR4A4PQ8NGN8 299 aa13.84□□□□□ -0.19
COL9A3-212ENST00000481800 DPF1Q92782 380 aa13.84□□□□□ -0.19
COL9A3-212ENST00000481800 AGMATQ9BSE5 352 aa13.84□□□□□ -0.19
COL9A3-212ENST00000481800 MCRIP2Q9BUT9 160 aaKnown RBP13.84□□□□□ -0.19
COL9A3-212ENST00000481800 OR51J1Q9H342 316 aa13.84□□□□□ -0.19
COL9A3-212ENST00000481800 PARP11Q9NR21 331 aa13.84□□□□□ -0.19
COL9A3-212ENST00000481800 ZNF580Q9UK33 172 aa13.84□□□□□ -0.19
COL9A3-212ENST00000481800 RNF150Q9ULK6 438 aa13.84□□□□□ -0.19
COL9A3-212ENST00000481800 WASHC3Q9Y3C0 194 aa13.84□□□□□ -0.19
COL9A3-212ENST00000481800 H0YJW9 148 aa13.83□□□□□ -0.2
COL9A3-212ENST00000481800 FABP7O15540 132 aa13.83□□□□□ -0.2
COL9A3-212ENST00000481800 PLXNB1O43157 2135 aa13.83□□□□□ -0.2
COL9A3-212ENST00000481800 GNB3P16520 340 aa13.83□□□□□ -0.2
COL9A3-212ENST00000481800 TALDO1P37837 337 aa13.83□□□□□ -0.2
COL9A3-212ENST00000481800 CDX1P47902 265 aaPredicted RBP13.83□□□□□ -0.2
COL9A3-212ENST00000481800 RAB25P57735 213 aa13.83□□□□□ -0.2
COL9A3-212ENST00000481800 CFHR3Q02985 330 aa13.83□□□□□ -0.2
COL9A3-212ENST00000481800 TMEM65Q6PI78 240 aa13.83□□□□□ -0.2
COL9A3-212ENST00000481800 PTX4Q96A99 478 aa13.83□□□□□ -0.2
COL9A3-212ENST00000481800 ATG5Q9H1Y0 275 aa13.83□□□□□ -0.2
COL9A3-212ENST00000481800 RDH8Q9NYR8 311 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms