RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 CEACAM19Q7Z692 300 aa11.88□□□□□ -0.51
LIMS3-203ENST00000480744 SVOPQ8N4V2 548 aa11.88□□□□□ -0.51
LIMS3-203ENST00000480744 OR1N2Q8NGR9 330 aa11.88□□□□□ -0.51
LIMS3-203ENST00000480744 KCNG3Q8TAE7 436 aa11.88□□□□□ -0.51
LIMS3-203ENST00000480744 PHYHIPQ92561 330 aa11.88□□□□□ -0.51
LIMS3-203ENST00000480744 WWC2-AS2Q96NR7 200 aa11.88□□□□□ -0.51
LIMS3-203ENST00000480744 CHCHD6Q9BRQ6 235 aa11.88□□□□□ -0.51
LIMS3-203ENST00000480744 IFI27L2Q9H2X8 130 aa11.88□□□□□ -0.51
LIMS3-203ENST00000480744 VSIG4Q9Y279 399 aa11.88□□□□□ -0.51
LIMS3-203ENST00000480744 NBEAL2Q6ZNJ1 2754 aa11.88□□□□□ -0.51
LIMS3-203ENST00000480744 LY86O95711 162 aa11.87□□□□□ -0.51
LIMS3-203ENST00000480744 OR8U8P0C7N1 319 aa11.87□□□□□ -0.51
LIMS3-203ENST00000480744 SRMP19623 302 aa11.87□□□□□ -0.51
LIMS3-203ENST00000480744 PPIFP30405 207 aaKnown RBP11.87□□□□□ -0.51
LIMS3-203ENST00000480744 UNC119Q13432 240 aa11.87□□□□□ -0.51
LIMS3-203ENST00000480744 PLGLAQ15195 96 aa11.87□□□□□ -0.51
LIMS3-203ENST00000480744 RPL39P5Q59GN2 51 aa11.87□□□□□ -0.51
LIMS3-203ENST00000480744 LY6G6FQ5SQ64 297 aa11.87□□□□□ -0.51
LIMS3-203ENST00000480744 LIPKQ5VXJ0 399 aa11.87□□□□□ -0.51
LIMS3-203ENST00000480744 ZNF491Q8N8L2 437 aa11.87□□□□□ -0.51
LIMS3-203ENST00000480744 MYOZ3Q8TDC0 251 aa11.87□□□□□ -0.51
LIMS3-203ENST00000480744 ABHD5Q8WTS1 349 aa11.87□□□□□ -0.51
LIMS3-203ENST00000480744 UBE2E2Q96LR5 201 aa11.87□□□□□ -0.51
LIMS3-203ENST00000480744 ACOT13Q9NPJ3 140 aa11.87□□□□□ -0.51
LIMS3-203ENST00000480744 PLEKHJ1Q9NW61 149 aa11.87□□□□□ -0.51
LIMS3-203ENST00000480744 SCOCQ9UIL1 159 aa11.87□□□□□ -0.51
LIMS3-203ENST00000480744 BLOC1S6Q9UL45 172 aa11.87□□□□□ -0.51
LIMS3-203ENST00000480744 A3GALT2U3KPV4 340 aa11.87□□□□□ -0.51
LIMS3-203ENST00000480744 SORL1Q92673 2214 aa11.86□□□□□ -0.51
LIMS3-203ENST00000480744 HSMCR30P0CW71 290 aa11.86□□□□□ -0.51
LIMS3-203ENST00000480744 RPS25P62851 125 aaKnown RBP11.86□□□□□ -0.51
LIMS3-203ENST00000480744 GNB1P62873 340 aa11.86□□□□□ -0.51
LIMS3-203ENST00000480744 ZNF616Q08AN1 781 aa11.86□□□□□ -0.51
LIMS3-203ENST00000480744 P2RY14Q15391 338 aa11.86□□□□□ -0.51
LIMS3-203ENST00000480744 GLDNQ6ZMI3 551 aaPredicted RBP11.86□□□□□ -0.51
LIMS3-203ENST00000480744 NPBQ8NG41 125 aa11.86□□□□□ -0.51
LIMS3-203ENST00000480744 ABHD14BQ96IU4 210 aa11.86□□□□□ -0.51
LIMS3-203ENST00000480744 TM2D1Q9BX74 207 aa11.86□□□□□ -0.51
LIMS3-203ENST00000480744 PARP12Q9H0J9 701 aaKnown RBP11.86□□□□□ -0.51
LIMS3-203ENST00000480744 FBXL15Q9H469 300 aa11.86□□□□□ -0.51
LIMS3-203ENST00000480744 PLGRKTQ9HBL7 147 aa11.86□□□□□ -0.51
LIMS3-203ENST00000480744 PIPOXQ9P0Z9 390 aa11.86□□□□□ -0.51
LIMS3-203ENST00000480744 SLC23A1Q9UHI7 598 aa11.86□□□□□ -0.51
LIMS3-203ENST00000480744 ZNF256Q9Y2P7 627 aaPredicted RBP11.86□□□□□ -0.51
LIMS3-203ENST00000480744 LSM4Q9Y4Z0 139 aaKnown RBP11.86□□□□□ -0.51
LIMS3-203ENST00000480744 KMT2CQ8NEZ4 4911 aaKnown RBP11.86□□□□□ -0.51
LIMS3-203ENST00000480744 A0A0A6YYD4 124 aa11.85□□□□□ -0.51
LIMS3-203ENST00000480744 A0A1W2PN81 502 aa11.85□□□□□ -0.51
LIMS3-203ENST00000480744 H7C2Y5 167 aa11.85□□□□□ -0.51
LIMS3-203ENST00000480744 I3L521 148 aa11.85□□□□□ -0.51
LIMS3-203ENST00000480744 RAB29O14966 203 aa11.85□□□□□ -0.51
LIMS3-203ENST00000480744 SLC22A1O15245 554 aa11.85□□□□□ -0.51
LIMS3-203ENST00000480744 NDUFA3O95167 84 aa11.85□□□□□ -0.51
LIMS3-203ENST00000480744 BPNT1O95861 308 aa11.85□□□□□ -0.51
LIMS3-203ENST00000480744 NAPSAO96009 420 aa11.85□□□□□ -0.51
LIMS3-203ENST00000480744 IGLV1-40P01703 118 aa11.85□□□□□ -0.51
LIMS3-203ENST00000480744 NHLRC4P0CG21 123 aaPredicted RBP11.85□□□□□ -0.51
LIMS3-203ENST00000480744 CPEP16870 476 aa11.85□□□□□ -0.51
LIMS3-203ENST00000480744 CHRNA7P36544 502 aa11.85□□□□□ -0.51
LIMS3-203ENST00000480744 RAB9AP51151 201 aa11.85□□□□□ -0.51
LIMS3-203ENST00000480744 NDPQ00604 133 aa11.85□□□□□ -0.51
LIMS3-203ENST00000480744 MLLT11Q13015 90 aaPredicted RBP11.85□□□□□ -0.51
LIMS3-203ENST00000480744 TPBGQ13641 420 aa11.85□□□□□ -0.51
LIMS3-203ENST00000480744 KIAA0141Q14154 515 aaPredicted RBP11.85□□□□□ -0.51
LIMS3-203ENST00000480744 SSX1Q16384 188 aa11.85□□□□□ -0.51
LIMS3-203ENST00000480744 ASPHD1Q5U4P2 390 aa11.85□□□□□ -0.51
LIMS3-203ENST00000480744 FAM71F2Q6NXP2 309 aa11.85□□□□□ -0.51
LIMS3-203ENST00000480744 TMEM91Q6ZNR0 172 aa11.85□□□□□ -0.51
LIMS3-203ENST00000480744 MOB1BQ7L9L4 216 aa11.85□□□□□ -0.51
LIMS3-203ENST00000480744 SPARTQ8N0X7 666 aa11.85□□□□□ -0.51
LIMS3-203ENST00000480744 OR6M1Q8NGM8 313 aa11.85□□□□□ -0.51
LIMS3-203ENST00000480744 CASTOR1Q8WTX7 329 aa11.85□□□□□ -0.51
LIMS3-203ENST00000480744 UFD1Q92890 307 aa11.85□□□□□ -0.51
LIMS3-203ENST00000480744 TMEM203Q969S6 136 aa11.85□□□□□ -0.51
LIMS3-203ENST00000480744 MGLLQ99685 303 aa11.85□□□□□ -0.51
LIMS3-203ENST00000480744 ASCL2Q99929 193 aa11.85□□□□□ -0.51
LIMS3-203ENST00000480744 HDHD3Q9BSH5 251 aaPredicted RBP11.85□□□□□ -0.51
LIMS3-203ENST00000480744 ALX4Q9H161 411 aaPredicted RBP11.85□□□□□ -0.51
LIMS3-203ENST00000480744 ISYNA1Q9NPH2 558 aa11.85□□□□□ -0.51
LIMS3-203ENST00000480744 U3KQK5 164 aa11.85□□□□□ -0.51
LIMS3-203ENST00000480744 TENM3Q9P273 2699 aa11.84□□□□□ -0.51
LIMS3-203ENST00000480744 TMEM14DPA8MWL7 114 aa11.84□□□□□ -0.51
LIMS3-203ENST00000480744 RRHO14718 337 aa11.84□□□□□ -0.51
LIMS3-203ENST00000480744 SOCS1O15524 211 aa11.84□□□□□ -0.51
LIMS3-203ENST00000480744 HSPA12AO43301 675 aa11.84□□□□□ -0.51
LIMS3-203ENST00000480744 GSTP1P09211 210 aaKnown RBP11.84□□□□□ -0.51
LIMS3-203ENST00000480744 UCHL1P09936 223 aa11.84□□□□□ -0.51
LIMS3-203ENST00000480744 CT45A6P0DMU7 189 aa11.84□□□□□ -0.51
LIMS3-203ENST00000480744 CT45A5P0DMU8 189 aa11.84□□□□□ -0.51
LIMS3-203ENST00000480744 CT45A7P0DMV0 189 aa11.84□□□□□ -0.51
LIMS3-203ENST00000480744 QRFPP83859 136 aa11.84□□□□□ -0.51
LIMS3-203ENST00000480744 RUNX1Q01196 453 aa11.84□□□□□ -0.51
LIMS3-203ENST00000480744 ZNF880Q6PDB4 577 aa11.84□□□□□ -0.51
LIMS3-203ENST00000480744 ZNF367Q7RTV3 350 aa11.84□□□□□ -0.51
LIMS3-203ENST00000480744 URM1Q9BTM9 101 aaKnown RBP11.84□□□□□ -0.51
LIMS3-203ENST00000480744 OR1A1Q9P1Q5 309 aa11.84□□□□□ -0.51
LIMS3-203ENST00000480744 AK3Q9UIJ7 227 aa11.84□□□□□ -0.51
LIMS3-203ENST00000480744 FBXO7Q9Y3I1 522 aa11.84□□□□□ -0.51
LIMS3-203ENST00000480744 OR5H14A6NHG9 310 aa11.83□□□□□ -0.52
LIMS3-203ENST00000480744 ARSBP15848 533 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms