RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 MS4A5Q9H3V2 200 aa9.95□□□□□ -0.82
PRPF39-203ENST00000477626 CBLN4Q9NTU7 201 aa9.95□□□□□ -0.82
PRPF39-203ENST00000477626 COA4Q9NYJ1 87 aa9.95□□□□□ -0.82
PRPF39-203ENST00000477626 DNAJB11Q9UBS4 358 aa9.95□□□□□ -0.82
PRPF39-203ENST00000477626 C17orf98A8MV24 154 aa9.95□□□□□ -0.82
PRPF39-203ENST00000477626 SLC25A48Q6ZT89 311 aaKnown RBP9.95□□□□□ -0.82
PRPF39-203ENST00000477626 CCDC71LQ8N9Z2 235 aa9.95□□□□□ -0.82
PRPF39-203ENST00000477626 OR1S1Q8NH92 325 aa9.95□□□□□ -0.82
PRPF39-203ENST00000477626 UBALD1Q8TB05 177 aa9.95□□□□□ -0.82
PRPF39-203ENST00000477626 TAS2R3Q9NYW6 316 aa9.95□□□□□ -0.82
PRPF39-203ENST00000477626 DOPEY1Q5JWR5 2465 aa9.95□□□□□ -0.82
PRPF39-203ENST00000477626 USF3Q68DE3 2245 aa9.95□□□□□ -0.82
PRPF39-203ENST00000477626 IGHV1-69-2A0A0G2JMI3 117 aa9.95□□□□□ -0.82
PRPF39-203ENST00000477626 DUTP33316 252 aaKnown RBP9.95□□□□□ -0.82
PRPF39-203ENST00000477626 LUMP51884 338 aaPredicted RBP9.95□□□□□ -0.82
PRPF39-203ENST00000477626 EXOSC2Q13868 293 aaKnown RBP9.95□□□□□ -0.82
PRPF39-203ENST00000477626 TMEM155Q4W5P6 130 aa9.95□□□□□ -0.82
PRPF39-203ENST00000477626 ACOT7LQ6ZUV0 252 aa9.95□□□□□ -0.82
PRPF39-203ENST00000477626 SECTM1Q8WVN6 248 aa9.95□□□□□ -0.82
PRPF39-203ENST00000477626 RBPMSQ93062 196 aaKnown RBP9.95□□□□□ -0.82
PRPF39-203ENST00000477626 REG4Q9BYZ8 158 aa9.95□□□□□ -0.82
PRPF39-203ENST00000477626 PLEKHF2Q9H8W4 249 aa9.95□□□□□ -0.82
PRPF39-203ENST00000477626 ANK3Q12955 4377 aaKnown RBP9.95□□□□□ -0.82
PRPF39-203ENST00000477626 hCG_1807616A0A1W2PRN6 198 aa9.94□□□□□ -0.82
PRPF39-203ENST00000477626 LINC00862A6NCI5 91 aa9.94□□□□□ -0.82
PRPF39-203ENST00000477626 BCL2L11O43521 198 aa9.94□□□□□ -0.82
PRPF39-203ENST00000477626 GOSR1O95249 250 aa9.94□□□□□ -0.82
PRPF39-203ENST00000477626 PAX1P15863 534 aa9.94□□□□□ -0.82
PRPF39-203ENST00000477626 TNFSF4P23510 183 aa9.94□□□□□ -0.82
PRPF39-203ENST00000477626 LINC00205P59089 165 aa9.94□□□□□ -0.82
PRPF39-203ENST00000477626 CYCSP99999 105 aaKnown RBP9.94□□□□□ -0.82
PRPF39-203ENST00000477626 ZNF833PQ6ZTB9 187 aa9.94□□□□□ -0.82
PRPF39-203ENST00000477626 BSCL2Q96G97 398 aaPredicted RBP9.94□□□□□ -0.82
PRPF39-203ENST00000477626 RPUSD1Q9UJJ7 312 aaKnown RBP9.94□□□□□ -0.82
PRPF39-203ENST00000477626 POMT1Q9Y6A1 747 aa9.94□□□□□ -0.82
PRPF39-203ENST00000477626 ZNF729A6NN14 1252 aaPredicted RBP9.94□□□□□ -0.82
PRPF39-203ENST00000477626 SRPXP78539 464 aa9.94□□□□□ -0.82
PRPF39-203ENST00000477626 TMEM268Q5VZI3 342 aa9.94□□□□□ -0.82
PRPF39-203ENST00000477626 ZNF767PQ75MW2 155 aa9.94□□□□□ -0.82
PRPF39-203ENST00000477626 LGI3Q8N145 548 aa9.94□□□□□ -0.82
PRPF39-203ENST00000477626 LINC00311Q8N616 119 aa9.94□□□□□ -0.82
PRPF39-203ENST00000477626 YLPM1P49750 1951 aaKnown RBP9.94□□□□□ -0.82
PRPF39-203ENST00000477626 PHF1O43189 567 aaPredicted RBP9.94□□□□□ -0.82
PRPF39-203ENST00000477626 SELENOVP59797 346 aa9.94□□□□□ -0.82
PRPF39-203ENST00000477626 HERV-K104P61576 105 aa9.94□□□□□ -0.82
PRPF39-203ENST00000477626 OR6C3Q9NZP0 311 aa9.94□□□□□ -0.82
PRPF39-203ENST00000477626 PPIAL4EA0A075B759 164 aa9.93□□□□□ -0.82
PRPF39-203ENST00000477626 PPIAL4DF5H284 164 aa9.93□□□□□ -0.82
PRPF39-203ENST00000477626 ARPC5O15511 151 aa9.93□□□□□ -0.82
PRPF39-203ENST00000477626 PPIAL4FP0DN26 164 aa9.93□□□□□ -0.82
PRPF39-203ENST00000477626 STPG2Q8N412 459 aa9.93□□□□□ -0.82
PRPF39-203ENST00000477626 VRK1Q99986 396 aaPredicted RBP9.93□□□□□ -0.82
PRPF39-203ENST00000477626 PPIAL4AQ9Y536 164 aa9.93□□□□□ -0.82
PRPF39-203ENST00000477626 GABRA2P47869 451 aa9.93□□□□□ -0.82
PRPF39-203ENST00000477626 ALKBH2Q6NS38 261 aa9.93□□□□□ -0.82
PRPF39-203ENST00000477626 HEPN1Q6WQI6 88 aa9.93□□□□□ -0.82
PRPF39-203ENST00000477626 ZNF546Q86UE3 836 aa9.93□□□□□ -0.82
PRPF39-203ENST00000477626 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.93□□□□□ -0.82
PRPF39-203ENST00000477626 GPR146Q96CH1 333 aa9.93□□□□□ -0.82
PRPF39-203ENST00000477626 WFDC1Q9HC57 220 aa9.93□□□□□ -0.82
PRPF39-203ENST00000477626 NBASA2RRP1 2371 aa9.93□□□□□ -0.82
PRPF39-203ENST00000477626 TRAV38-1A0A0B4J264 116 aa9.93□□□□□ -0.82
PRPF39-203ENST00000477626 A0A0D9SG52 128 aa9.93□□□□□ -0.82
PRPF39-203ENST00000477626 FAM157CP0CG43 387 aa9.93□□□□□ -0.82
PRPF39-203ENST00000477626 ZNF16P17020 682 aaPredicted RBP9.93□□□□□ -0.82
PRPF39-203ENST00000477626 VDAC1P21796 283 aa9.93□□□□□ -0.82
PRPF39-203ENST00000477626 ZNF66Q6ZN08 573 aa9.93□□□□□ -0.82
PRPF39-203ENST00000477626 TCTEX1D1Q8N7M0 179 aa9.93□□□□□ -0.82
PRPF39-203ENST00000477626 MED9Q9NWA0 146 aa9.93□□□□□ -0.82
PRPF39-203ENST00000477626 TNFSF12O43508 249 aa9.92□□□□□ -0.82
PRPF39-203ENST00000477626 HOXB5P09067 269 aa9.92□□□□□ -0.82
PRPF39-203ENST00000477626 MDKP21741 143 aaPredicted RBP9.92□□□□□ -0.82
PRPF39-203ENST00000477626 ARL11Q969Q4 196 aa9.92□□□□□ -0.82
PRPF39-203ENST00000477626 OR2D2Q9H210 308 aa9.92□□□□□ -0.82
PRPF39-203ENST00000477626 LY6LH3BQJ8 138 aa9.92□□□□□ -0.82
PRPF39-203ENST00000477626 FGF16O43320 207 aa9.92□□□□□ -0.82
PRPF39-203ENST00000477626 POU2AF1Q16633 256 aa9.92□□□□□ -0.82
PRPF39-203ENST00000477626 NEK7Q8TDX7 302 aa9.92□□□□□ -0.82
PRPF39-203ENST00000477626 IDI2-AS1Q9NZ38 188 aa9.92□□□□□ -0.82
PRPF39-203ENST00000477626 PMS2P5A8MQ11 134 aa9.91□□□□□ -0.82
PRPF39-203ENST00000477626 RBFOX2O43251 390 aaKnown RBP eCLIP9.91□□□□□ -0.82
PRPF39-203ENST00000477626 RBP4P02753 201 aa9.91□□□□□ -0.82
PRPF39-203ENST00000477626 OR8U9P0C7N5 309 aa9.91□□□□□ -0.82
PRPF39-203ENST00000477626 ERVFRD-1P60508 538 aa9.91□□□□□ -0.82
PRPF39-203ENST00000477626 CLLU1Q5K131 121 aa9.91□□□□□ -0.82
PRPF39-203ENST00000477626 HCP5Q6MZN7 132 aa9.91□□□□□ -0.82
PRPF39-203ENST00000477626 OR8U1Q8NH10 309 aa9.91□□□□□ -0.82
PRPF39-203ENST00000477626 IL1F10Q8WWZ1 152 aa9.91□□□□□ -0.82
PRPF39-203ENST00000477626 FBXO9Q9UK97 447 aaPredicted RBP9.91□□□□□ -0.82
PRPF39-203ENST00000477626 CHD6Q8TD26 2715 aa9.91□□□□□ -0.82
PRPF39-203ENST00000477626 PDZD2O15018 2839 aa9.91□□□□□ -0.82
PRPF39-203ENST00000477626 IAH1Q2TAA2 248 aaPredicted RBP9.91□□□□□ -0.82
PRPF39-203ENST00000477626 Q8N7P7 452 aa9.91□□□□□ -0.82
PRPF39-203ENST00000477626 AJUBAQ96IF1 538 aa9.91□□□□□ -0.82
PRPF39-203ENST00000477626 MFFQ9GZY8 342 aa9.91□□□□□ -0.82
PRPF39-203ENST00000477626 A0A1B0GU03 582 aa9.91□□□□□ -0.82
PRPF39-203ENST00000477626 FAM90A9PA6NNJ1 464 aa9.91□□□□□ -0.82
PRPF39-203ENST00000477626 DVL1O14640 695 aa9.91□□□□□ -0.82
PRPF39-203ENST00000477626 ST8SIA5O15466 376 aa9.91□□□□□ -0.82
PRPF39-203ENST00000477626 RLN2P04090 185 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms