RNA–Protein interactions for RNA: ENST00000477141.1

RPL39P34-201, Transcript of ribosomal protein L39 pseudogene 34, humanhuman

BASIC

Gene RPL39P34, Length 156 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P34-201ENST00000477141 CHST6Q9GZX3 395 aa-0.33□□□□□ -2.46
RPL39P34-201ENST00000477141 DEFB129Q9H1M3 183 aa-0.33□□□□□ -2.46
RPL39P34-201ENST00000477141 METTL17Q9H7H0 456 aaPredicted RBP-0.33□□□□□ -2.46
RPL39P34-201ENST00000477141 LIN28AQ9H9Z2 209 aaKnown RBP-0.33□□□□□ -2.46
RPL39P34-201ENST00000477141 HYPKQ9NX55 129 aa-0.33□□□□□ -2.46
RPL39P34-201ENST00000477141 DNAJC27Q9NZQ0 273 aa-0.33□□□□□ -2.46
RPL39P34-201ENST00000477141 TAAR3PQ9P1P4 343 aa-0.33□□□□□ -2.46
RPL39P34-201ENST00000477141 ODF2LQ9ULJ1 636 aa-0.33□□□□□ -2.46
RPL39P34-201ENST00000477141 KLF12Q9Y4X4 402 aa-0.33□□□□□ -2.46
RPL39P34-201ENST00000477141 ABCA4P78363 2273 aa-0.33□□□□□ -2.46
RPL39P34-201ENST00000477141 ANAPC1Q9H1A4 1944 aa-0.33□□□□□ -2.46
RPL39P34-201ENST00000477141 RALGAPA2Q2PPJ7 1873 aa-0.33□□□□□ -2.46
RPL39P34-201ENST00000477141 MYO15BQ96JP2 1530 aa-0.33□□□□□ -2.46
RPL39P34-201ENST00000477141 DNMT1P26358 1616 aaKnown RBP-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 LOC285556D6RIA3 1793 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 PTPRSQ13332 1948 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 DSCAML1Q8TD84 2053 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 TRAV1-1A0A0B4J248 108 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 TRAV38-1A0A0B4J264 116 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 A0A0J9YW62 118 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 A0A1B0GXF2 115 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 IRGMA1A4Y4 181 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 HEATR9A2RTY3 570 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 C2orf70A6NJV1 201 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 TMEM212A6NML5 194 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 C21orf140B9A014 251 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 H0YC42 278 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 H0YCG3 227 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 GOLGA6L19H0YKK7 550 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 H3BP45 60 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 I3L4J1 428 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 M0R1B8 84 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 TRDMT1O14717 391 aaKnown RBP-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 UBDO15205 165 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 FGF16O43320 207 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 AKR7A2O43488 359 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 GATCO43716 136 aaKnown RBP-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 CREBL2O60519 120 aaPredicted RBP-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 WBP4O75554 376 aaKnown RBP-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 SPAG6O75602 509 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 OR2F2O95006 317 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 UBR5O95071 2799 aaPredicted RBP-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 GCGP01275 180 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 UBBP0CG47 229 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 M6PRP20645 277 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 SPRR2DP22532 72 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 GRPRP30550 384 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 PYCR1P32322 319 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 CA5AP35218 305 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 NUP62P37198 522 aaPredicted RBP-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 CCR2P41597 374 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 GABRA2P47869 451 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 SERPINB10P48595 397 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 DNASE1L1P49184 302 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 STC1P52823 247 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 MP68P56378 58 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 C21orf59P57076 290 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 RGS8P57771 180 aaPredicted RBP-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 MLF1P58340 268 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 TAS2R60P59551 318 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 BPIFB3P59826 476 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 GABARAPL2P60520 117 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 RAB4BP61018 213 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 RAB2AP61019 212 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 FGF12P61328 243 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 UBE2IP63279 158 aaKnown RBP-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 HBG1P69891 147 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 HBG2P69892 147 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 GTF2BQ00403 316 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 DEFA6Q01524 100 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 SPAG1Q07617 926 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 DNAJC3Q13217 504 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 GPM6BQ13491 265 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 MIAQ16674 131 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 TBC1D28Q2M2D7 210 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 ASB16-AS1Q495Z4 193 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 TPRG1LQ5T0D9 272 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 C1QTNF12Q5T7M4 302 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 HES3Q5TGS1 186 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 FAM27BQ5VT28 67 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 LPCAT4Q643R3 524 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 TWF2Q6IBS0 349 aaKnown RBP-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 EBLN2Q6P2I7 272 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 EPGNQ6UW88 154 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 AMTNQ6UX39 209 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 SOSTDC1Q6X4U4 206 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 CENPQQ7L2Z9 268 aaPredicted RBP-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 FAM19A1Q7Z5A9 133 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 NANOGNBQ7Z5D8 188 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 LINC00471Q8N535 108 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 C3orf56Q8N813 242 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 EIF1ADQ8N9N8 165 aaKnown RBP-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 GATD1Q8NB37 220 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 OR2D3Q8NGH3 330 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 OR52E5Q8NH55 327 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 FAM213BQ8TBF2 198 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 PIH1D2Q8WWB5 315 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 ITFG2Q969R8 447 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 NT5C3BQ969T7 300 aa-0.34□□□□□ -2.46
RPL39P34-201ENST00000477141 TESCQ96BS2 214 aa-0.34□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms