RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 NR2C2APQ86WQ0 139 aa12.81□□□□□ -0.36
COL1A1-205ENST00000476387 FOXRED2Q8IWF2 684 aa12.81□□□□□ -0.36
COL1A1-205ENST00000476387 ODF3L1Q8IXM7 274 aa12.81□□□□□ -0.36
COL1A1-205ENST00000476387 CHPT1Q8WUD6 406 aa12.81□□□□□ -0.36
COL1A1-205ENST00000476387 S1PR3Q99500 378 aa12.81□□□□□ -0.36
COL1A1-205ENST00000476387 RASL11BQ9BPW5 248 aa12.81□□□□□ -0.36
COL1A1-205ENST00000476387 ATG5Q9H1Y0 275 aa12.81□□□□□ -0.36
COL1A1-205ENST00000476387 IFI27L2Q9H2X8 130 aa12.81□□□□□ -0.36
COL1A1-205ENST00000476387 LIN7CQ9NUP9 197 aaKnown RBP12.81□□□□□ -0.36
COL1A1-205ENST00000476387 PIPOXQ9P0Z9 390 aa12.81□□□□□ -0.36
COL1A1-205ENST00000476387 RAB29O14966 203 aa12.8□□□□□ -0.36
COL1A1-205ENST00000476387 TNFAIP8O95379 198 aa12.8□□□□□ -0.36
COL1A1-205ENST00000476387 PF4P02776 101 aa12.8□□□□□ -0.36
COL1A1-205ENST00000476387 HIST1H1DP16402 221 aaKnown RBP12.8□□□□□ -0.36
COL1A1-205ENST00000476387 GNB3P16520 340 aa12.8□□□□□ -0.36
COL1A1-205ENST00000476387 CD36P16671 472 aa12.8□□□□□ -0.36
COL1A1-205ENST00000476387 OR3A3P47888 321 aa12.8□□□□□ -0.36
COL1A1-205ENST00000476387 ZNF833PQ6ZTB9 187 aa12.8□□□□□ -0.36
COL1A1-205ENST00000476387 MRAPQ8TCY5 172 aa12.8□□□□□ -0.36
COL1A1-205ENST00000476387 AURKAIP1Q9NWT8 199 aaPredicted RBP12.8□□□□□ -0.36
COL1A1-205ENST00000476387 OR1A1Q9P1Q5 309 aa12.8□□□□□ -0.36
COL1A1-205ENST00000476387 DAPK2Q9UIK4 370 aa12.8□□□□□ -0.36
COL1A1-205ENST00000476387 TRDCB7Z8K6 153 aa12.79□□□□□ -0.36
COL1A1-205ENST00000476387 RAB27BO00194 218 aa12.79□□□□□ -0.36
COL1A1-205ENST00000476387 MFNGO00587 321 aa12.79□□□□□ -0.36
COL1A1-205ENST00000476387 ITGB1BP1O14713 200 aa12.79□□□□□ -0.36
COL1A1-205ENST00000476387 IGHG2P01859 326 aa12.79□□□□□ -0.36
COL1A1-205ENST00000476387 SCTP09683 121 aa12.79□□□□□ -0.36
COL1A1-205ENST00000476387 IGLL1P15814 213 aa12.79□□□□□ -0.36
COL1A1-205ENST00000476387 SDC2P34741 201 aa12.79□□□□□ -0.36
COL1A1-205ENST00000476387 TALDO1P37837 337 aa12.79□□□□□ -0.36
COL1A1-205ENST00000476387 CEACAM6P40199 344 aa12.79□□□□□ -0.36
COL1A1-205ENST00000476387 SLC35B1P78383 322 aa12.79□□□□□ -0.36
COL1A1-205ENST00000476387 ARFRP1Q13795 201 aa12.79□□□□□ -0.36
COL1A1-205ENST00000476387 KIR2DS1Q14954 304 aa12.79□□□□□ -0.36
COL1A1-205ENST00000476387 ARL6IP1Q15041 203 aa12.79□□□□□ -0.36
COL1A1-205ENST00000476387 MMDQ15546 238 aa12.79□□□□□ -0.36
COL1A1-205ENST00000476387 TIMM50Q3ZCQ8 353 aa12.79□□□□□ -0.36
COL1A1-205ENST00000476387 FOXB2Q5VYV0 432 aa12.79□□□□□ -0.36
COL1A1-205ENST00000476387 SFXN4Q6P4A7 337 aa12.79□□□□□ -0.36
COL1A1-205ENST00000476387 Q8N9W7 124 aa12.79□□□□□ -0.36
COL1A1-205ENST00000476387 RCC1LQ96I51 464 aaKnown RBP12.79□□□□□ -0.36
COL1A1-205ENST00000476387 NABP2Q9BQ15 211 aa12.79□□□□□ -0.36
COL1A1-205ENST00000476387 ABCG5Q9H222 651 aa12.79□□□□□ -0.36
COL1A1-205ENST00000476387 GHITMQ9H3K2 345 aa12.79□□□□□ -0.36
COL1A1-205ENST00000476387 A0A087WXM4 84 aa12.78□□□□□ -0.36
COL1A1-205ENST00000476387 AP4M1O00189 453 aa12.78□□□□□ -0.36
COL1A1-205ENST00000476387 FABP7O15540 132 aa12.78□□□□□ -0.36
COL1A1-205ENST00000476387 SCGNO76038 276 aa12.78□□□□□ -0.36
COL1A1-205ENST00000476387 DUS4LO95620 317 aaKnown RBP12.78□□□□□ -0.36
COL1A1-205ENST00000476387 FCGR3AP08637 254 aa12.78□□□□□ -0.36
COL1A1-205ENST00000476387 GPR12P47775 334 aa12.78□□□□□ -0.36
COL1A1-205ENST00000476387 SERPINB10P48595 397 aa12.78□□□□□ -0.36
COL1A1-205ENST00000476387 MXD1Q05195 221 aa12.78□□□□□ -0.36
COL1A1-205ENST00000476387 C10orf99Q6UWK7 81 aa12.78□□□□□ -0.36
COL1A1-205ENST00000476387 OR4A4PQ8NGN8 299 aa12.78□□□□□ -0.36
COL1A1-205ENST00000476387 LGALS14Q8TCE9 139 aa12.78□□□□□ -0.36
COL1A1-205ENST00000476387 NOL4LQ96MY1 436 aaPredicted RBP12.78□□□□□ -0.36
COL1A1-205ENST00000476387 ZNF251Q9BRH9 671 aa12.78□□□□□ -0.36
COL1A1-205ENST00000476387 PARP12Q9H0J9 701 aaKnown RBP12.78□□□□□ -0.36
COL1A1-205ENST00000476387 PLSCR3Q9NRY6 295 aa12.78□□□□□ -0.36
COL1A1-205ENST00000476387 KCNK7Q9Y2U2 307 aa12.78□□□□□ -0.36
COL1A1-205ENST00000476387 RRP9O43818 475 aaKnown RBP12.77□□□□□ -0.37
COL1A1-205ENST00000476387 SNRPBP14678 240 aaKnown RBP12.77□□□□□ -0.37
COL1A1-205ENST00000476387 SOX6P35712 828 aa12.77□□□□□ -0.37
COL1A1-205ENST00000476387 ACTBP60709 375 aa12.77□□□□□ -0.37
COL1A1-205ENST00000476387 RPL39P5Q59GN2 51 aa12.77□□□□□ -0.37
COL1A1-205ENST00000476387 ZNF329Q86UD4 541 aa12.77□□□□□ -0.37
COL1A1-205ENST00000476387 STPG2Q8N412 459 aa12.77□□□□□ -0.37
COL1A1-205ENST00000476387 FAM71E2Q8N5Q1 922 aa12.77□□□□□ -0.37
COL1A1-205ENST00000476387 TSPAN14Q8NG11 270 aa12.77□□□□□ -0.37
COL1A1-205ENST00000476387 ABHD14BQ96IU4 210 aa12.77□□□□□ -0.37
COL1A1-205ENST00000476387 C11orf54Q9H0W9 315 aaPredicted RBP12.77□□□□□ -0.37
COL1A1-205ENST00000476387 LINC00527Q9UJ94 153 aa12.77□□□□□ -0.37
COL1A1-205ENST00000476387 ZNF221Q9UK13 617 aa12.77□□□□□ -0.37
COL1A1-205ENST00000476387 OR5H14A6NHG9 310 aa12.76□□□□□ -0.37
COL1A1-205ENST00000476387 BET1O15155 118 aa12.76□□□□□ -0.37
COL1A1-205ENST00000476387 SLC6A1P30531 599 aa12.76□□□□□ -0.37
COL1A1-205ENST00000476387 F2RL1P55085 397 aa12.76□□□□□ -0.37
COL1A1-205ENST00000476387 FAM131AQ6UXB0 335 aa12.76□□□□□ -0.37
COL1A1-205ENST00000476387 OR10J5Q8NHC4 309 aa12.76□□□□□ -0.37
COL1A1-205ENST00000476387 CENPOQ9BU64 300 aa12.76□□□□□ -0.37
COL1A1-205ENST00000476387 GON7Q9BXV9 100 aa12.76□□□□□ -0.37
COL1A1-205ENST00000476387 RNF167Q9H6Y7 350 aa12.76□□□□□ -0.37
COL1A1-205ENST00000476387 RDH8Q9NYR8 311 aa12.76□□□□□ -0.37
COL1A1-205ENST00000476387 KIAA1456Q9P272 454 aa12.76□□□□□ -0.37
COL1A1-205ENST00000476387 IGKV1-6A0A0C4DH72 117 aa12.75□□□□□ -0.37
COL1A1-205ENST00000476387 NBR2O15453 112 aa12.75□□□□□ -0.37
COL1A1-205ENST00000476387 DIRAS3O95661 229 aa12.75□□□□□ -0.37
COL1A1-205ENST00000476387 CLEC2LP0C7M8 214 aa12.75□□□□□ -0.37
COL1A1-205ENST00000476387 IDNKQ5T6J7 187 aa12.75□□□□□ -0.37
COL1A1-205ENST00000476387 COMMD1Q8N668 190 aa12.75□□□□□ -0.37
COL1A1-205ENST00000476387 MAFIPQ8WZ33 124 aa12.75□□□□□ -0.37
COL1A1-205ENST00000476387 RBMXL1Q96E39 390 aaKnown RBP12.75□□□□□ -0.37
COL1A1-205ENST00000476387 GINS4Q9BRT9 223 aa12.75□□□□□ -0.37
COL1A1-205ENST00000476387 AGMATQ9BSE5 352 aa12.75□□□□□ -0.37
COL1A1-205ENST00000476387 CABLES2Q9BTV7 478 aa12.75□□□□□ -0.37
COL1A1-205ENST00000476387 GPR61Q9BZJ8 451 aa12.75□□□□□ -0.37
COL1A1-205ENST00000476387 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.75□□□□□ -0.37
COL1A1-205ENST00000476387 RHBDL2Q9NX52 303 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms