RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 LEUTXA8MZ59 168 aa8.48□□□□□ -1.05
COL12A1-206ENST00000474564 J3QR06 171 aa8.48□□□□□ -1.05
COL12A1-206ENST00000474564 GOSR2O14653 212 aa8.48□□□□□ -1.05
COL12A1-206ENST00000474564 HSD17B6O14756 317 aa8.48□□□□□ -1.05
COL12A1-206ENST00000474564 SMAD7O15105 426 aaKnown RBP8.48□□□□□ -1.05
COL12A1-206ENST00000474564 TXNL1O43396 289 aa8.48□□□□□ -1.05
COL12A1-206ENST00000474564 FCN3O75636 299 aa8.48□□□□□ -1.05
COL12A1-206ENST00000474564 ARG1P05089 322 aa8.48□□□□□ -1.05
COL12A1-206ENST00000474564 COX7A1P24310 79 aa8.48□□□□□ -1.05
COL12A1-206ENST00000474564 HTR1DP28221 377 aa8.48□□□□□ -1.05
COL12A1-206ENST00000474564 BPIFB3P59826 476 aa8.48□□□□□ -1.05
COL12A1-206ENST00000474564 TAGLNQ01995 201 aaKnown RBP8.48□□□□□ -1.05
COL12A1-206ENST00000474564 ZFP69Q49AA0 526 aa8.48□□□□□ -1.05
COL12A1-206ENST00000474564 TMEM128Q5BJH2 165 aa8.48□□□□□ -1.05
COL12A1-206ENST00000474564 ZNF626Q68DY1 528 aa8.48□□□□□ -1.05
COL12A1-206ENST00000474564 ZNF66Q6ZN08 573 aa8.48□□□□□ -1.05
COL12A1-206ENST00000474564 Q6ZPA2 131 aa8.48□□□□□ -1.05
COL12A1-206ENST00000474564 SLC25A48Q6ZT89 311 aaKnown RBP8.48□□□□□ -1.05
COL12A1-206ENST00000474564 TCF23Q7RTU1 214 aa8.48□□□□□ -1.05
COL12A1-206ENST00000474564 LYG2Q86SG7 212 aa8.48□□□□□ -1.05
COL12A1-206ENST00000474564 LHFPL1Q86WI0 220 aa8.48□□□□□ -1.05
COL12A1-206ENST00000474564 PNKDQ8N490 385 aa8.48□□□□□ -1.05
COL12A1-206ENST00000474564 C12orf45Q8N5I9 185 aaPredicted RBP8.48□□□□□ -1.05
COL12A1-206ENST00000474564 LINC00311Q8N616 119 aa8.48□□□□□ -1.05
COL12A1-206ENST00000474564 BEND2Q8NDZ0 799 aa8.48□□□□□ -1.05
COL12A1-206ENST00000474564 OR52B4Q8NGK2 314 aa8.48□□□□□ -1.05
COL12A1-206ENST00000474564 COQ8AQ8NI60 647 aa8.48□□□□□ -1.05
COL12A1-206ENST00000474564 ZNF431Q8TF32 576 aaPredicted RBP8.48□□□□□ -1.05
COL12A1-206ENST00000474564 PHB2Q99623 299 aa8.48□□□□□ -1.05
COL12A1-206ENST00000474564 HSD17B10Q99714 261 aaKnown RBP8.48□□□□□ -1.05
COL12A1-206ENST00000474564 PDCD10Q9BUL8 212 aa8.48□□□□□ -1.05
COL12A1-206ENST00000474564 ALX4Q9H161 411 aaPredicted RBP8.48□□□□□ -1.05
COL12A1-206ENST00000474564 OR2D2Q9H210 308 aa8.48□□□□□ -1.05
COL12A1-206ENST00000474564 SIRT7Q9NRC8 400 aa8.48□□□□□ -1.05
COL12A1-206ENST00000474564 MMP26Q9NRE1 261 aa8.48□□□□□ -1.05
COL12A1-206ENST00000474564 RNF150Q9ULK6 438 aa8.48□□□□□ -1.05
COL12A1-206ENST00000474564 GAB2Q9UQC2 676 aa8.48□□□□□ -1.05
COL12A1-206ENST00000474564 PRELID3BQ9Y3B1 194 aa8.48□□□□□ -1.05
COL12A1-206ENST00000474564 BOLA2-SMG1P6H3BVE0 249 aa8.47□□□□□ -1.05
COL12A1-206ENST00000474564 ST8SIA5O15466 376 aa8.47□□□□□ -1.05
COL12A1-206ENST00000474564 ATG12O94817 140 aa8.47□□□□□ -1.05
COL12A1-206ENST00000474564 GAPDHP04406 335 aaKnown RBP8.47□□□□□ -1.05
COL12A1-206ENST00000474564 IGHV4-31P0DP07 118 aa8.47□□□□□ -1.05
COL12A1-206ENST00000474564 VSIG10L2P0DP72 767 aa8.47□□□□□ -1.05
COL12A1-206ENST00000474564 PI3P19957 117 aa8.47□□□□□ -1.05
COL12A1-206ENST00000474564 HNF1AP20823 631 aa8.47□□□□□ -1.05
COL12A1-206ENST00000474564 UBE2E1P51965 193 aa8.47□□□□□ -1.05
COL12A1-206ENST00000474564 PIGPP57054 158 aa8.47□□□□□ -1.05
COL12A1-206ENST00000474564 SRPXP78539 464 aa8.47□□□□□ -1.05
COL12A1-206ENST00000474564 PAX2Q02962 417 aa8.47□□□□□ -1.05
COL12A1-206ENST00000474564 SCGB2A2Q13296 93 aa8.47□□□□□ -1.05
COL12A1-206ENST00000474564 GNMTQ14749 295 aa8.47□□□□□ -1.05
COL12A1-206ENST00000474564 FCN2Q15485 313 aa8.47□□□□□ -1.05
COL12A1-206ENST00000474564 SLC9A3R2Q15599 337 aa8.47□□□□□ -1.05
COL12A1-206ENST00000474564 MINOS1Q5TGZ0 78 aa8.47□□□□□ -1.05
COL12A1-206ENST00000474564 AADACL3Q5VUY0 350 aa8.47□□□□□ -1.05
COL12A1-206ENST00000474564 ZNF660Q6AZW8 331 aaPredicted RBP8.47□□□□□ -1.05
COL12A1-206ENST00000474564 CCDC144NLQ6NUI1 221 aa8.47□□□□□ -1.05
COL12A1-206ENST00000474564 FAM71F2Q6NXP2 309 aa8.47□□□□□ -1.05
COL12A1-206ENST00000474564 KCTD9Q7L273 389 aa8.47□□□□□ -1.05
COL12A1-206ENST00000474564 SLC25A42Q86VD7 318 aa8.47□□□□□ -1.05
COL12A1-206ENST00000474564 TCTEX1D1Q8N7M0 179 aa8.47□□□□□ -1.05
COL12A1-206ENST00000474564 OR11H6Q8NGC7 330 aa8.47□□□□□ -1.05
COL12A1-206ENST00000474564 CD300LFQ8TDQ1 290 aa8.47□□□□□ -1.05
COL12A1-206ENST00000474564 CHAC2Q8WUX2 184 aa8.47□□□□□ -1.05
COL12A1-206ENST00000474564 CAPSLQ8WWF8 208 aa8.47□□□□□ -1.05
COL12A1-206ENST00000474564 LHX4Q969G2 390 aa8.47□□□□□ -1.05
COL12A1-206ENST00000474564 RPEQ96AT9 228 aa8.47□□□□□ -1.05
COL12A1-206ENST00000474564 MSI2Q96DH6 328 aaKnown RBP8.47□□□□□ -1.05
COL12A1-206ENST00000474564 AIFM2Q9BRQ8 373 aa8.47□□□□□ -1.05
COL12A1-206ENST00000474564 RSRP1Q9BUV0 290 aa8.47□□□□□ -1.05
COL12A1-206ENST00000474564 FXYD6Q9H0Q3 95 aa8.47□□□□□ -1.05
COL12A1-206ENST00000474564 SIRPDQ9H106 197 aa8.47□□□□□ -1.05
COL12A1-206ENST00000474564 CCL28Q9NRJ3 127 aa8.47□□□□□ -1.05
COL12A1-206ENST00000474564 GPR132Q9UNW8 380 aa8.47□□□□□ -1.05
COL12A1-206ENST00000474564 FAM96BQ9Y3D0 163 aa8.47□□□□□ -1.05
COL12A1-206ENST00000474564 MINOS1-NBL1R4GNA1 71 aa8.47□□□□□ -1.05
COL12A1-206ENST00000474564 HELZ2Q9BYK8 2649 aaKnown RBP8.46□□□□□ -1.05
COL12A1-206ENST00000474564 DSCAML1Q8TD84 2053 aa8.46□□□□□ -1.05
COL12A1-206ENST00000474564 FAM25EA8MYX2 175 aa8.46□□□□□ -1.06
COL12A1-206ENST00000474564 OOSP1A8MZH6 123 aa8.46□□□□□ -1.06
COL12A1-206ENST00000474564 MMP23AO75900 390 aa8.46□□□□□ -1.06
COL12A1-206ENST00000474564 IGHV3-7P01780 117 aa8.46□□□□□ -1.06
COL12A1-206ENST00000474564 APOA2P02652 100 aa8.46□□□□□ -1.06
COL12A1-206ENST00000474564 RRASP10301 218 aa8.46□□□□□ -1.06
COL12A1-206ENST00000474564 ZNF16P17020 682 aaPredicted RBP8.46□□□□□ -1.06
COL12A1-206ENST00000474564 GNRHRP30968 328 aa8.46□□□□□ -1.06
COL12A1-206ENST00000474564 KIR2DS2P43631 304 aa8.46□□□□□ -1.06
COL12A1-206ENST00000474564 THBS3P49746 956 aa8.46□□□□□ -1.06
COL12A1-206ENST00000474564 MECP2P51608 486 aaKnown RBP8.46□□□□□ -1.06
COL12A1-206ENST00000474564 DHODHQ02127 395 aa8.46□□□□□ -1.06
COL12A1-206ENST00000474564 PPP1R1AQ13522 171 aa8.46□□□□□ -1.06
COL12A1-206ENST00000474564 HLA-DRB5Q30154 266 aa8.46□□□□□ -1.06
COL12A1-206ENST00000474564 MIDNQ504T8 468 aa8.46□□□□□ -1.06
COL12A1-206ENST00000474564 PHLDA2Q53GA4 152 aa8.46□□□□□ -1.06
COL12A1-206ENST00000474564 CT45A1Q5HYN5 189 aa8.46□□□□□ -1.06
COL12A1-206ENST00000474564 TGIF2LXQ8IUE1 241 aa8.46□□□□□ -1.06
COL12A1-206ENST00000474564 Q8N7P7 452 aa8.46□□□□□ -1.06
COL12A1-206ENST00000474564 ADAD2Q8NCV1 583 aaKnown RBP8.46□□□□□ -1.06
COL12A1-206ENST00000474564 MAPK1IP1LQ8NDC0 245 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms