RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 RPL23AP62750 156 aaKnown RBP14.12□□□□□ -0.15
UPF3A-203ENST00000474056 SLC35B1P78383 322 aa14.12□□□□□ -0.15
UPF3A-203ENST00000474056 RPL39P5Q59GN2 51 aa14.12□□□□□ -0.15
UPF3A-203ENST00000474056 FAM71F2Q6NXP2 309 aa14.12□□□□□ -0.15
UPF3A-203ENST00000474056 C18orf65Q6ZTR6 163 aa14.12□□□□□ -0.15
UPF3A-203ENST00000474056 FCGR1BQ92637 280 aa14.12□□□□□ -0.15
UPF3A-203ENST00000474056 ABHD14BQ96IU4 210 aa14.12□□□□□ -0.15
UPF3A-203ENST00000474056 RITA1Q96K30 269 aa14.12□□□□□ -0.15
UPF3A-203ENST00000474056 TXNL4BQ9NX01 149 aaKnown RBP14.12□□□□□ -0.15
UPF3A-203ENST00000474056 PIPOXQ9P0Z9 390 aa14.12□□□□□ -0.15
UPF3A-203ENST00000474056 IGKV1-6A0A0C4DH72 117 aa14.11□□□□□ -0.15
UPF3A-203ENST00000474056 ITGB1BP1O14713 200 aa14.11□□□□□ -0.15
UPF3A-203ENST00000474056 RAB29O14966 203 aa14.11□□□□□ -0.15
UPF3A-203ENST00000474056 HSPA12AO43301 675 aa14.11□□□□□ -0.15
UPF3A-203ENST00000474056 PRB2P02812 416 aaPredicted RBP14.11□□□□□ -0.15
UPF3A-203ENST00000474056 FGF9P31371 208 aaPredicted RBP14.11□□□□□ -0.15
UPF3A-203ENST00000474056 SOX6P35712 828 aa14.11□□□□□ -0.15
UPF3A-203ENST00000474056 CEACAM6P40199 344 aa14.11□□□□□ -0.15
UPF3A-203ENST00000474056 ACTBP60709 375 aa14.11□□□□□ -0.15
UPF3A-203ENST00000474056 ZNF773Q6PK81 442 aa14.11□□□□□ -0.15
UPF3A-203ENST00000474056 OR10R2Q8NGX6 335 aa14.11□□□□□ -0.15
UPF3A-203ENST00000474056 RAB3CQ96E17 227 aa14.11□□□□□ -0.15
UPF3A-203ENST00000474056 AGMATQ9BSE5 352 aa14.11□□□□□ -0.15
UPF3A-203ENST00000474056 STUB1Q9UNE7 303 aa14.11□□□□□ -0.15
UPF3A-203ENST00000474056 RAB27BO00194 218 aa14.1□□□□□ -0.15
UPF3A-203ENST00000474056 CD3GP09693 182 aa14.1□□□□□ -0.15
UPF3A-203ENST00000474056 GNB3P16520 340 aa14.1□□□□□ -0.15
UPF3A-203ENST00000474056 RAB6AP20340 208 aa14.1□□□□□ -0.15
UPF3A-203ENST00000474056 ZBTB25P24278 435 aa14.1□□□□□ -0.15
UPF3A-203ENST00000474056 FAM131AQ6UXB0 335 aa14.1□□□□□ -0.15
UPF3A-203ENST00000474056 GLDNQ6ZMI3 551 aaPredicted RBP14.1□□□□□ -0.15
UPF3A-203ENST00000474056 ETV3LQ6ZN32 361 aa14.1□□□□□ -0.15
UPF3A-203ENST00000474056 COMMD1Q8N668 190 aa14.1□□□□□ -0.15
UPF3A-203ENST00000474056 WFDC9Q8NEX5 89 aa14.1□□□□□ -0.15
UPF3A-203ENST00000474056 PHF21AQ96BD5 680 aa14.1□□□□□ -0.15
UPF3A-203ENST00000474056 C11orf54Q9H0W9 315 aaPredicted RBP14.1□□□□□ -0.15
UPF3A-203ENST00000474056 TGP01266 2768 aa14.09□□□□□ -0.15
UPF3A-203ENST00000474056 A0A075B6Q4 140 aa14.09□□□□□ -0.15
UPF3A-203ENST00000474056 MFNGO00587 321 aa14.09□□□□□ -0.15
UPF3A-203ENST00000474056 FCGR3AP08637 254 aa14.09□□□□□ -0.15
UPF3A-203ENST00000474056 CT45A6P0DMU7 189 aa14.09□□□□□ -0.15
UPF3A-203ENST00000474056 CT45A5P0DMU8 189 aa14.09□□□□□ -0.15
UPF3A-203ENST00000474056 CT45A7P0DMV0 189 aa14.09□□□□□ -0.15
UPF3A-203ENST00000474056 IGLL1P15814 213 aa14.09□□□□□ -0.15
UPF3A-203ENST00000474056 GADD45AP24522 165 aa14.09□□□□□ -0.15
UPF3A-203ENST00000474056 LCNL1Q6ZST4 164 aa14.09□□□□□ -0.15
UPF3A-203ENST00000474056 C8orf86Q6ZUL3 223 aa14.09□□□□□ -0.15
UPF3A-203ENST00000474056 EDARADDQ8WWZ3 215 aa14.09□□□□□ -0.15
UPF3A-203ENST00000474056 MAFIPQ8WZ33 124 aa14.09□□□□□ -0.15
UPF3A-203ENST00000474056 OR51E2Q9H255 320 aa14.09□□□□□ -0.15
UPF3A-203ENST00000474056 ZNF107Q9UII5 783 aaPredicted RBP14.09□□□□□ -0.15
UPF3A-203ENST00000474056 RRP15Q9Y3B9 282 aaKnown RBP14.09□□□□□ -0.15
UPF3A-203ENST00000474056 TRDCB7Z8K6 153 aa14.08□□□□□ -0.16
UPF3A-203ENST00000474056 NBR2O15453 112 aa14.08□□□□□ -0.16
UPF3A-203ENST00000474056 RRP9O43818 475 aaKnown RBP14.08□□□□□ -0.16
UPF3A-203ENST00000474056 HIST1H1DP16402 221 aaKnown RBP14.08□□□□□ -0.16
UPF3A-203ENST00000474056 MRPS15P82914 257 aaKnown RBP14.08□□□□□ -0.16
UPF3A-203ENST00000474056 CFHR3Q02985 330 aa14.08□□□□□ -0.16
UPF3A-203ENST00000474056 PNLIPRP3Q17RR3 467 aa14.08□□□□□ -0.16
UPF3A-203ENST00000474056 TEX38Q6PEX7 206 aa14.08□□□□□ -0.16
UPF3A-203ENST00000474056 KLHL30-AS1Q8NEE0 82 aa14.08□□□□□ -0.16
UPF3A-203ENST00000474056 PTX4Q96A99 478 aa14.08□□□□□ -0.16
UPF3A-203ENST00000474056 ZFP57Q9NU63 452 aa14.08□□□□□ -0.16
UPF3A-203ENST00000474056 RNF150Q9ULK6 438 aa14.08□□□□□ -0.16
UPF3A-203ENST00000474056 SSR3Q9UNL2 185 aa14.08□□□□□ -0.16
UPF3A-203ENST00000474056 NOTOA8MTQ0 251 aa14.07□□□□□ -0.16
UPF3A-203ENST00000474056 NUDT19A8MXV4 375 aa14.07□□□□□ -0.16
UPF3A-203ENST00000474056 H0YJW9 148 aa14.07□□□□□ -0.16
UPF3A-203ENST00000474056 FABP7O15540 132 aa14.07□□□□□ -0.16
UPF3A-203ENST00000474056 PROP1O75360 226 aa14.07□□□□□ -0.16
UPF3A-203ENST00000474056 NDUFA3O95167 84 aa14.07□□□□□ -0.16
UPF3A-203ENST00000474056 RPLP1P05386 114 aaKnown RBP14.07□□□□□ -0.16
UPF3A-203ENST00000474056 C5orf64Q2M2E5 130 aa14.07□□□□□ -0.16
UPF3A-203ENST00000474056 LINC00482Q8N8I6 264 aa14.07□□□□□ -0.16
UPF3A-203ENST00000474056 OR4A4PQ8NGN8 299 aa14.07□□□□□ -0.16
UPF3A-203ENST00000474056 GON7Q9BXV9 100 aa14.07□□□□□ -0.16
UPF3A-203ENST00000474056 RNF167Q9H6Y7 350 aa14.07□□□□□ -0.16
UPF3A-203ENST00000474056 RDH8Q9NYR8 311 aa14.07□□□□□ -0.16
UPF3A-203ENST00000474056 ELF5Q9UKW6 265 aaPredicted RBP14.07□□□□□ -0.16
UPF3A-203ENST00000474056 IGHV7-81A0A0B4J1V7 117 aa14.06□□□□□ -0.16
UPF3A-203ENST00000474056 METTL21EPA6NDL7 271 aa14.06□□□□□ -0.16
UPF3A-203ENST00000474056 OR5H14A6NHG9 310 aa14.06□□□□□ -0.16
UPF3A-203ENST00000474056 HLA-DRB1P01911 266 aa14.06□□□□□ -0.16
UPF3A-203ENST00000474056 IGF1P05019 195 aa14.06□□□□□ -0.16
UPF3A-203ENST00000474056 GSTT2P0CG29 244 aa14.06□□□□□ -0.16
UPF3A-203ENST00000474056 GSTT2BP0CG30 244 aa14.06□□□□□ -0.16
UPF3A-203ENST00000474056 VDAC1P21796 283 aa14.06□□□□□ -0.16
UPF3A-203ENST00000474056 THBS3P49746 956 aa14.06□□□□□ -0.16
UPF3A-203ENST00000474056 NEDD8Q15843 81 aa14.06□□□□□ -0.16
UPF3A-203ENST00000474056 IGSF11Q5DX21 431 aa14.06□□□□□ -0.16
UPF3A-203ENST00000474056 FOXB2Q5VYV0 432 aa14.06□□□□□ -0.16
UPF3A-203ENST00000474056 TPRA1Q86W33 373 aa14.06□□□□□ -0.16
UPF3A-203ENST00000474056 MRPL41Q8IXM3 137 aaKnown RBP14.06□□□□□ -0.16
UPF3A-203ENST00000474056 NPBQ8NG41 125 aa14.06□□□□□ -0.16
UPF3A-203ENST00000474056 KCTD7Q96MP8 289 aa14.06□□□□□ -0.16
UPF3A-203ENST00000474056 CHCHD6Q9BRQ6 235 aa14.06□□□□□ -0.16
UPF3A-203ENST00000474056 CABLES2Q9BTV7 478 aa14.06□□□□□ -0.16
UPF3A-203ENST00000474056 TOLLIPQ9H0E2 274 aa14.06□□□□□ -0.16
UPF3A-203ENST00000474056 ATG5Q9H1Y0 275 aa14.06□□□□□ -0.16
UPF3A-203ENST00000474056 GHITMQ9H3K2 345 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms