RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 PPIAL4DF5H284 164 aa14.9□□□□□ -0.02
VARS2-206ENST00000473916 RAMP3O60896 148 aa14.9□□□□□ -0.02
VARS2-206ENST00000473916 PPIAL4FP0DN26 164 aa14.9□□□□□ -0.02
VARS2-206ENST00000473916 HKR1P10072 659 aa14.9□□□□□ -0.02
VARS2-206ENST00000473916 EPHA1P21709 976 aa14.9□□□□□ -0.02
VARS2-206ENST00000473916 ZNF134P52741 427 aa14.9□□□□□ -0.02
VARS2-206ENST00000473916 ERVFRD-1P60508 538 aa14.9□□□□□ -0.02
VARS2-206ENST00000473916 MORN2Q502X0 79 aa14.9□□□□□ -0.02
VARS2-206ENST00000473916 C4orf17Q53FE4 359 aa14.9□□□□□ -0.02
VARS2-206ENST00000473916 AQP10Q96PS8 301 aa14.9□□□□□ -0.02
VARS2-206ENST00000473916 RCL1Q9Y2P8 373 aaKnown RBP14.9□□□□□ -0.02
VARS2-206ENST00000473916 PPIAL4AQ9Y536 164 aa14.9□□□□□ -0.02
VARS2-206ENST00000473916 ZFYVE26Q68DK2 2539 aa14.9□□□□□ -0.02
VARS2-206ENST00000473916 TRAV38-1A0A0B4J264 116 aa14.9□□□□□ -0.02
VARS2-206ENST00000473916 IGHV1-69-2A0A0G2JMI3 117 aa14.9□□□□□ -0.02
VARS2-206ENST00000473916 F5H0A9 414 aaPredicted RBP14.9□□□□□ -0.02
VARS2-206ENST00000473916 SLC31A2O15432 143 aa14.9□□□□□ -0.02
VARS2-206ENST00000473916 NDUFB7P17568 137 aa14.9□□□□□ -0.02
VARS2-206ENST00000473916 Q3ZCU0 254 aa14.9□□□□□ -0.02
VARS2-206ENST00000473916 CXorf66Q5JRM2 361 aaPredicted RBP14.9□□□□□ -0.02
VARS2-206ENST00000473916 ARPC5LQ9BPX5 153 aa14.9□□□□□ -0.02
VARS2-206ENST00000473916 MAGT1Q9H0U3 335 aa14.9□□□□□ -0.02
VARS2-206ENST00000473916 SDHAF2Q9NX18 166 aa14.9□□□□□ -0.02
VARS2-206ENST00000473916 OR6C3Q9NZP0 311 aa14.9□□□□□ -0.02
VARS2-206ENST00000473916 A0A1W2PPE3 182 aa14.89□□□□□ -0.03
VARS2-206ENST00000473916 F2RL2O00254 374 aa14.89□□□□□ -0.03
VARS2-206ENST00000473916 B3GALNT1O75752 331 aa14.89□□□□□ -0.03
VARS2-206ENST00000473916 MMP23AO75900 390 aa14.89□□□□□ -0.03
VARS2-206ENST00000473916 CLDN14O95500 239 aa14.89□□□□□ -0.03
VARS2-206ENST00000473916 IGKV1-5P01602 117 aa14.89□□□□□ -0.03
VARS2-206ENST00000473916 VDAC1P21796 283 aa14.89□□□□□ -0.03
VARS2-206ENST00000473916 BRWD1-AS2P59051 145 aa14.89□□□□□ -0.03
VARS2-206ENST00000473916 FAM74A1Q5RGS3 127 aa14.89□□□□□ -0.03
VARS2-206ENST00000473916 BSCL2Q96G97 398 aaPredicted RBP14.89□□□□□ -0.03
VARS2-206ENST00000473916 CYTL1Q9NRR1 136 aa14.89□□□□□ -0.03
VARS2-206ENST00000473916 C19orf12Q9NSK7 152 aa14.89□□□□□ -0.03
VARS2-206ENST00000473916 COL12A1Q99715 3063 aa14.89□□□□□ -0.03
VARS2-206ENST00000473916 A0A1W2PPR1 153 aa14.88□□□□□ -0.03
VARS2-206ENST00000473916 NKX6-3A6NJ46 265 aa14.88□□□□□ -0.03
VARS2-206ENST00000473916 PROP1O75360 226 aa14.88□□□□□ -0.03
VARS2-206ENST00000473916 WNT2P09544 360 aa14.88□□□□□ -0.03
VARS2-206ENST00000473916 Q6ZRM9 215 aa14.88□□□□□ -0.03
VARS2-206ENST00000473916 C1orf87Q8N0U7 546 aa14.88□□□□□ -0.03
VARS2-206ENST00000473916 DMBX1Q8NFW5 382 aa14.88□□□□□ -0.03
VARS2-206ENST00000473916 GPR146Q96CH1 333 aa14.88□□□□□ -0.03
VARS2-206ENST00000473916 FAM234AQ9H0X4 552 aa14.88□□□□□ -0.03
VARS2-206ENST00000473916 LIN7CQ9NUP9 197 aaKnown RBP14.88□□□□□ -0.03
VARS2-206ENST00000473916 CTSZQ9UBR2 303 aa14.88□□□□□ -0.03
VARS2-206ENST00000473916 SLC25A10Q9UBX3 287 aaPredicted RBP14.88□□□□□ -0.03
VARS2-206ENST00000473916 JPT1Q9UK76 154 aa14.88□□□□□ -0.03
VARS2-206ENST00000473916 KBTBD11-OT1A0A1B0GTJ5 212 aa14.88□□□□□ -0.03
VARS2-206ENST00000473916 LINC00473A8K010 186 aa14.88□□□□□ -0.03
VARS2-206ENST00000473916 C19orf84I3L1E1 186 aa14.88□□□□□ -0.03
VARS2-206ENST00000473916 TNFRSF13BO14836 293 aaPredicted RBP14.88□□□□□ -0.03
VARS2-206ENST00000473916 LY6HO94772 140 aa14.88□□□□□ -0.03
VARS2-206ENST00000473916 POLR2GP62487 172 aaKnown RBP eCLIP14.88□□□□□ -0.03
VARS2-206ENST00000473916 SMCO1Q147U7 214 aa14.88□□□□□ -0.03
VARS2-206ENST00000473916 IL22RA2Q969J5 263 aa14.88□□□□□ -0.03
VARS2-206ENST00000473916 CLN8Q9UBY8 286 aa14.88□□□□□ -0.03
VARS2-206ENST00000473916 TRGV10A0A0A0MS01 117 aa14.87□□□□□ -0.03
VARS2-206ENST00000473916 C17orf98A8MV24 154 aa14.87□□□□□ -0.03
VARS2-206ENST00000473916 COL8A2P25067 703 aa14.87□□□□□ -0.03
VARS2-206ENST00000473916 RPL12P30050 165 aaKnown RBP14.87□□□□□ -0.03
VARS2-206ENST00000473916 UBA52P62987 128 aaKnown RBP14.87□□□□□ -0.03
VARS2-206ENST00000473916 ZNF273Q14593 569 aa14.87□□□□□ -0.03
VARS2-206ENST00000473916 C1orf229Q6ZS94 237 aaPredicted RBP14.87□□□□□ -0.03
VARS2-206ENST00000473916 PLEKHF2Q9H8W4 249 aa14.87□□□□□ -0.03
VARS2-206ENST00000473916 POMT1Q9Y6A1 747 aa14.87□□□□□ -0.03
VARS2-206ENST00000473916 DOCK11Q5JSL3 2073 aa14.87□□□□□ -0.03
VARS2-206ENST00000473916 DUXBA0A1W2PPF3 345 aa14.87□□□□□ -0.03
VARS2-206ENST00000473916 ST8SIA3O43173 380 aa14.87□□□□□ -0.03
VARS2-206ENST00000473916 NFYBP25208 207 aa14.87□□□□□ -0.03
VARS2-206ENST00000473916 ZNF816Q0VGE8 651 aaPredicted RBP14.87□□□□□ -0.03
VARS2-206ENST00000473916 RPL39P5Q59GN2 51 aa14.87□□□□□ -0.03
VARS2-206ENST00000473916 PRAMEF5Q5TYX0 476 aa14.87□□□□□ -0.03
VARS2-206ENST00000473916 RBMXL1Q96E39 390 aaKnown RBP14.87□□□□□ -0.03
VARS2-206ENST00000473916 GSX2Q9BZM3 304 aa14.87□□□□□ -0.03
VARS2-206ENST00000473916 CLEC18AA5D8T8 446 aa14.86□□□□□ -0.03
VARS2-206ENST00000473916 YPEL1O60688 119 aa14.86□□□□□ -0.03
VARS2-206ENST00000473916 NUP62P37198 522 aaPredicted RBP14.86□□□□□ -0.03
VARS2-206ENST00000473916 LPAR6P43657 344 aa14.86□□□□□ -0.03
VARS2-206ENST00000473916 NKX2-1P43699 371 aaPredicted RBP14.86□□□□□ -0.03
VARS2-206ENST00000473916 CLLU1Q5K131 121 aa14.86□□□□□ -0.03
VARS2-206ENST00000473916 CLEC18CQ8NCF0 446 aa14.86□□□□□ -0.03
VARS2-206ENST00000473916 SCARB1Q8WTV0 552 aa14.86□□□□□ -0.03
VARS2-206ENST00000473916 TCTEX1D2Q8WW35 142 aa14.86□□□□□ -0.03
VARS2-206ENST00000473916 YPEL2Q96QA6 119 aa14.86□□□□□ -0.03
VARS2-206ENST00000473916 SMIM3Q9BZL3 60 aa14.86□□□□□ -0.03
VARS2-206ENST00000473916 IFI27L2Q9H2X8 130 aa14.86□□□□□ -0.03
VARS2-206ENST00000473916 NCOR1P1Q9H4R4 102 aa14.86□□□□□ -0.03
VARS2-206ENST00000473916 ZC4H2Q9NQZ6 224 aa14.86□□□□□ -0.03
VARS2-206ENST00000473916 ITGB1BP2Q9UKP3 347 aa14.86□□□□□ -0.03
VARS2-206ENST00000473916 SSSCA1O60232 199 aa14.85□□□□□ -0.03
VARS2-206ENST00000473916 SOD3P08294 240 aa14.85□□□□□ -0.03
VARS2-206ENST00000473916 THOC7Q6I9Y2 204 aaKnown RBP14.85□□□□□ -0.03
VARS2-206ENST00000473916 RNASE11Q8TAA1 199 aaKnown RBP14.85□□□□□ -0.03
VARS2-206ENST00000473916 SPIN2AQ99865 258 aa14.85□□□□□ -0.03
VARS2-206ENST00000473916 SPIN2BQ9BPZ2 258 aa14.85□□□□□ -0.03
VARS2-206ENST00000473916 C11orf1Q9H5F2 150 aa14.85□□□□□ -0.03
VARS2-206ENST00000473916 GFOD1Q9NXC2 390 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms