RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 CDX1P47902 265 aaPredicted RBP13□□□□□ -0.33
USP40-212ENST00000473191 KIR2DS1Q14954 304 aa13□□□□□ -0.33
USP40-212ENST00000473191 LY6G6FQ5SQ64 297 aa13□□□□□ -0.33
USP40-212ENST00000473191 ASPHD1Q5U4P2 390 aa13□□□□□ -0.33
USP40-212ENST00000473191 FAM131AQ6UXB0 335 aa13□□□□□ -0.33
USP40-212ENST00000473191 FAM89BQ8N5H3 189 aa13□□□□□ -0.33
USP40-212ENST00000473191 OR2AK2Q8NG84 335 aa13□□□□□ -0.33
USP40-212ENST00000473191 CASTOR1Q8WTX7 329 aa13□□□□□ -0.33
USP40-212ENST00000473191 TPRKBQ9Y3C4 175 aa13□□□□□ -0.33
USP40-212ENST00000473191 IGKV1-6A0A0C4DH72 117 aa12.99□□□□□ -0.33
USP40-212ENST00000473191 FCN1O00602 326 aa12.99□□□□□ -0.33
USP40-212ENST00000473191 SLC17A2O00624 439 aa12.99□□□□□ -0.33
USP40-212ENST00000473191 NBR2O15453 112 aa12.99□□□□□ -0.33
USP40-212ENST00000473191 ARSBP15848 533 aa12.99□□□□□ -0.33
USP40-212ENST00000473191 CALRP27797 417 aaKnown RBP12.99□□□□□ -0.33
USP40-212ENST00000473191 VEGFCP49767 419 aa12.99□□□□□ -0.33
USP40-212ENST00000473191 PLAC9Q5JTB6 97 aa12.99□□□□□ -0.33
USP40-212ENST00000473191 NPBQ8NG41 125 aa12.99□□□□□ -0.33
USP40-212ENST00000473191 MYOZ3Q8TDC0 251 aa12.99□□□□□ -0.33
USP40-212ENST00000473191 ARHGAP5-AS1Q96IT6 56 aa12.99□□□□□ -0.33
USP40-212ENST00000473191 OR5B12Q96R08 314 aa12.99□□□□□ -0.33
USP40-212ENST00000473191 AGMATQ9BSE5 352 aa12.99□□□□□ -0.33
USP40-212ENST00000473191 OR51J1Q9H342 316 aa12.99□□□□□ -0.33
USP40-212ENST00000473191 PLGRKTQ9HBL7 147 aa12.99□□□□□ -0.33
USP40-212ENST00000473191 PARP11Q9NR21 331 aa12.99□□□□□ -0.33
USP40-212ENST00000473191 SLC23A1Q9UHI7 598 aa12.99□□□□□ -0.33
USP40-212ENST00000473191 SOX15O60248 233 aa12.98□□□□□ -0.33
USP40-212ENST00000473191 NDUFA3O95167 84 aa12.98□□□□□ -0.33
USP40-212ENST00000473191 HLA-DRB1P01911 266 aa12.98□□□□□ -0.33
USP40-212ENST00000473191 SLC6A1P30531 599 aa12.98□□□□□ -0.33
USP40-212ENST00000473191 OR10A3P58181 314 aa12.98□□□□□ -0.33
USP40-212ENST00000473191 MLLT11Q13015 90 aaPredicted RBP12.98□□□□□ -0.33
USP40-212ENST00000473191 SSX1Q16384 188 aa12.98□□□□□ -0.33
USP40-212ENST00000473191 C5orf64Q2M2E5 130 aa12.98□□□□□ -0.33
USP40-212ENST00000473191 MOGAT2Q3SYC2 334 aa12.98□□□□□ -0.33
USP40-212ENST00000473191 HES5Q5TA89 166 aa12.98□□□□□ -0.33
USP40-212ENST00000473191 DRAXINQ8NBI3 349 aaPredicted RBP12.98□□□□□ -0.33
USP40-212ENST00000473191 MGLLQ99685 303 aa12.98□□□□□ -0.33
USP40-212ENST00000473191 GON7Q9BXV9 100 aa12.98□□□□□ -0.33
USP40-212ENST00000473191 PECRQ9BY49 303 aa12.98□□□□□ -0.33
USP40-212ENST00000473191 C11orf54Q9H0W9 315 aaPredicted RBP12.98□□□□□ -0.33
USP40-212ENST00000473191 ALX4Q9H161 411 aaPredicted RBP12.98□□□□□ -0.33
USP40-212ENST00000473191 FBXL15Q9H469 300 aa12.98□□□□□ -0.33
USP40-212ENST00000473191 Q9N2K0 584 aa12.98□□□□□ -0.33
USP40-212ENST00000473191 ABRACLQ9P1F3 81 aa12.98□□□□□ -0.33
USP40-212ENST00000473191 RNF150Q9ULK6 438 aa12.98□□□□□ -0.33
USP40-212ENST00000473191 KCNK7Q9Y2U2 307 aa12.98□□□□□ -0.33
USP40-212ENST00000473191 COL7A1Q02388 2944 aa12.98□□□□□ -0.33
USP40-212ENST00000473191 TRBV6-6A0A0A6YYG2 114 aa12.97□□□□□ -0.33
USP40-212ENST00000473191 TMEM272A0A1B0GTI8 110 aa12.97□□□□□ -0.33
USP40-212ENST00000473191 H0YJW9 148 aa12.97□□□□□ -0.33
USP40-212ENST00000473191 LDLRAD4O15165 306 aa12.97□□□□□ -0.33
USP40-212ENST00000473191 RGS11O94810 467 aa12.97□□□□□ -0.33
USP40-212ENST00000473191 CD3GP09693 182 aa12.97□□□□□ -0.33
USP40-212ENST00000473191 CEACAM6P40199 344 aa12.97□□□□□ -0.33
USP40-212ENST00000473191 GNB1P62873 340 aa12.97□□□□□ -0.33
USP40-212ENST00000473191 HLA-DRB3P79483 266 aa12.97□□□□□ -0.33
USP40-212ENST00000473191 FHL3Q13643 280 aa12.97□□□□□ -0.33
USP40-212ENST00000473191 RAB11BQ15907 218 aa12.97□□□□□ -0.33
USP40-212ENST00000473191 C2orf76Q3KRA6 126 aa12.97□□□□□ -0.33
USP40-212ENST00000473191 LIN54Q6MZP7 749 aa12.97□□□□□ -0.33
USP40-212ENST00000473191 PRSS48Q7RTY5 328 aa12.97□□□□□ -0.33
USP40-212ENST00000473191 OR11H1Q8NG94 326 aa12.97□□□□□ -0.33
USP40-212ENST00000473191 OR8U1Q8NH10 309 aa12.97□□□□□ -0.33
USP40-212ENST00000473191 C4orf3Q8WVX3 66 aa12.97□□□□□ -0.33
USP40-212ENST00000473191 CNBD2Q96M20 576 aa12.97□□□□□ -0.33
USP40-212ENST00000473191 MCRIP2Q9BUT9 160 aaKnown RBP12.97□□□□□ -0.33
USP40-212ENST00000473191 ISYNA1Q9NPH2 558 aa12.97□□□□□ -0.33
USP40-212ENST00000473191 STEAP1Q9UHE8 339 aa12.97□□□□□ -0.33
USP40-212ENST00000473191 SCOCQ9UIL1 159 aa12.97□□□□□ -0.33
USP40-212ENST00000473191 GAB2Q9UQC2 676 aa12.97□□□□□ -0.33
USP40-212ENST00000473191 A0A0B4J203 849 aa12.96□□□□□ -0.33
USP40-212ENST00000473191 RAB29O14966 203 aa12.96□□□□□ -0.33
USP40-212ENST00000473191 IGLV1-40P01703 118 aa12.96□□□□□ -0.33
USP40-212ENST00000473191 EGR2P11161 476 aaPredicted RBP12.96□□□□□ -0.33
USP40-212ENST00000473191 ECSCRQ19T08 205 aa12.96□□□□□ -0.33
USP40-212ENST00000473191 C19orf54Q5BKX5 351 aa12.96□□□□□ -0.33
USP40-212ENST00000473191 IZUMO2Q6UXV1 221 aa12.96□□□□□ -0.33
USP40-212ENST00000473191 ZNF491Q8N8L2 437 aa12.96□□□□□ -0.33
USP40-212ENST00000473191 DPF1Q92782 380 aa12.96□□□□□ -0.33
USP40-212ENST00000473191 FAM3DQ96BQ1 224 aa12.96□□□□□ -0.33
USP40-212ENST00000473191 PRR25Q96S07 402 aa12.96□□□□□ -0.33
USP40-212ENST00000473191 FAM103A1Q9BTL3 118 aaKnown RBP12.96□□□□□ -0.33
USP40-212ENST00000473191 URM1Q9BTM9 101 aaKnown RBP12.96□□□□□ -0.33
USP40-212ENST00000473191 PIPOXQ9P0Z9 390 aa12.96□□□□□ -0.33
USP40-212ENST00000473191 ZNF580Q9UK33 172 aa12.96□□□□□ -0.33
USP40-212ENST00000473191 LRRC42Q9Y546 428 aa12.96□□□□□ -0.33
USP40-212ENST00000473191 TRAV41A0A0B4J266 112 aa12.95□□□□□ -0.34
USP40-212ENST00000473191 I3L521 148 aa12.95□□□□□ -0.34
USP40-212ENST00000473191 CLCC1Q96S66 551 aa12.95□□□□□ -0.34
USP40-212ENST00000473191 TPSG1Q9NRR2 321 aa12.95□□□□□ -0.34
USP40-212ENST00000473191 HSF4Q9ULV5 492 aa12.95□□□□□ -0.34
USP40-212ENST00000473191 A3GALT2U3KPV4 340 aa12.95□□□□□ -0.34
USP40-212ENST00000473191 V9GY05 133 aa12.95□□□□□ -0.34
USP40-212ENST00000473191 A0A1W2PN81 502 aa12.94□□□□□ -0.34
USP40-212ENST00000473191 RRHO14718 337 aa12.94□□□□□ -0.34
USP40-212ENST00000473191 ARL6IP5O75915 188 aa12.94□□□□□ -0.34
USP40-212ENST00000473191 IGKV1-16P04430 117 aa12.94□□□□□ -0.34
USP40-212ENST00000473191 CHRNA7P36544 502 aa12.94□□□□□ -0.34
USP40-212ENST00000473191 RAB9AP51151 201 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms