RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 KPTNQ9Y664 436 aa2.14□□□□□ -2.07
SGCE-210ENST00000472326 FLNCQ14315 2725 aa2.14□□□□□ -2.07
SGCE-210ENST00000472326 SPAG17Q6Q759 2223 aa2.14□□□□□ -2.07
SGCE-210ENST00000472326 SCN10AQ9Y5Y9 1956 aa2.14□□□□□ -2.07
SGCE-210ENST00000472326 CRYBG3Q68DQ2 2970 aa2.13□□□□□ -2.07
SGCE-210ENST00000472326 USP9YO00507 2555 aaPredicted RBP2.13□□□□□ -2.07
SGCE-210ENST00000472326 S100A2P29034 98 aa2.13□□□□□ -2.07
SGCE-210ENST00000472326 P2RY2P41231 377 aa2.13□□□□□ -2.07
SGCE-210ENST00000472326 TAS2R60P59551 318 aa2.13□□□□□ -2.07
SGCE-210ENST00000472326 NDUFAF6Q330K2 333 aa2.13□□□□□ -2.07
SGCE-210ENST00000472326 GALNT10Q86SR1 603 aa2.13□□□□□ -2.07
SGCE-210ENST00000472326 FBXO36Q8NEA4 188 aa2.13□□□□□ -2.07
SGCE-210ENST00000472326 OR2M3Q8NG83 312 aa2.13□□□□□ -2.07
SGCE-210ENST00000472326 OR5T3Q8NGG3 340 aa2.13□□□□□ -2.07
SGCE-210ENST00000472326 OR8K1Q8NGG5 319 aa2.13□□□□□ -2.07
SGCE-210ENST00000472326 OR6K3Q8NGY3 331 aa2.13□□□□□ -2.07
SGCE-210ENST00000472326 FLVCR2Q9UPI3 526 aa2.13□□□□□ -2.07
SGCE-210ENST00000472326 ICE1Q9Y2F5 2266 aa2.13□□□□□ -2.07
SGCE-210ENST00000472326 CELSR2Q9HCU4 2923 aa2.13□□□□□ -2.07
SGCE-210ENST00000472326 ASCC3Q8N3C0 2202 aaKnown RBP2.13□□□□□ -2.07
SGCE-210ENST00000472326 BSNQ9UPA5 3926 aa2.12□□□□□ -2.07
SGCE-210ENST00000472326 SIPA1L1O43166 1804 aa2.12□□□□□ -2.07
SGCE-210ENST00000472326 TMEM131Q92545 1883 aa2.12□□□□□ -2.07
SGCE-210ENST00000472326 PDZD2O15018 2839 aa2.12□□□□□ -2.07
SGCE-210ENST00000472326 NBEAL1Q6ZS30 2694 aa2.12□□□□□ -2.07
SGCE-210ENST00000472326 SPTBN1Q01082 2364 aaKnown RBP2.12□□□□□ -2.07
SGCE-210ENST00000472326 MED13LQ71F56 2210 aa2.12□□□□□ -2.07
SGCE-210ENST00000472326 BOLA2-SMG1P6H3BVE0 249 aa2.12□□□□□ -2.07
SGCE-210ENST00000472326 NEMFO60524 1076 aa2.12□□□□□ -2.07
SGCE-210ENST00000472326 IGKV5-2P06315 115 aa2.12□□□□□ -2.07
SGCE-210ENST00000472326 S100A9P06702 114 aaKnown RBP2.12□□□□□ -2.07
SGCE-210ENST00000472326 SOD3P08294 240 aa2.12□□□□□ -2.07
SGCE-210ENST00000472326 LIPCP11150 499 aa2.12□□□□□ -2.07
SGCE-210ENST00000472326 HLA-EP13747 358 aa2.12□□□□□ -2.07
SGCE-210ENST00000472326 HTR4Q13639 388 aa2.12□□□□□ -2.07
SGCE-210ENST00000472326 TMEM215Q68D42 235 aa2.12□□□□□ -2.07
SGCE-210ENST00000472326 ERICH5Q6P6B1 374 aa2.12□□□□□ -2.07
SGCE-210ENST00000472326 UGT2A3Q6UWM9 527 aa2.12□□□□□ -2.07
SGCE-210ENST00000472326 MARCH3Q86UD3 253 aa2.12□□□□□ -2.07
SGCE-210ENST00000472326 OR2V1Q8NHB1 315 aa2.12□□□□□ -2.07
SGCE-210ENST00000472326 CENPNQ96H22 339 aaPredicted RBP2.12□□□□□ -2.07
SGCE-210ENST00000472326 ANAPC13Q9BS18 74 aa2.12□□□□□ -2.07
SGCE-210ENST00000472326 CENPEQ02224 2701 aa2.12□□□□□ -2.07
SGCE-210ENST00000472326 DLG5Q8TDM6 1919 aa2.12□□□□□ -2.07
SGCE-210ENST00000472326 PTPRBP23467 1997 aa2.12□□□□□ -2.07
SGCE-210ENST00000472326 CLUHO75153 1309 aa2.12□□□□□ -2.07
SGCE-210ENST00000472326 CACNA1EQ15878 2313 aa2.12□□□□□ -2.07
SGCE-210ENST00000472326 NIPBLQ6KC79 2804 aaeCLIP2.12□□□□□ -2.07
SGCE-210ENST00000472326 MTORP42345 2549 aa2.12□□□□□ -2.07
SGCE-210ENST00000472326 FN1P02751 2386 aaKnown RBP2.12□□□□□ -2.07
SGCE-210ENST00000472326 VPS37CA5D8V6 355 aaPredicted RBP2.11□□□□□ -2.07
SGCE-210ENST00000472326 CRTAPO75718 401 aaPredicted RBP2.11□□□□□ -2.07
SGCE-210ENST00000472326 SCGB1C2P0DMR2 95 aa2.11□□□□□ -2.07
SGCE-210ENST00000472326 GABRA1P14867 456 aa2.11□□□□□ -2.07
SGCE-210ENST00000472326 M6PRP20645 277 aa2.11□□□□□ -2.07
SGCE-210ENST00000472326 ETV1P50549 477 aa2.11□□□□□ -2.07
SGCE-210ENST00000472326 STK38Q15208 465 aa2.11□□□□□ -2.07
SGCE-210ENST00000472326 TNXAQ16473 311 aa2.11□□□□□ -2.07
SGCE-210ENST00000472326 Q499Y3 187 aa2.11□□□□□ -2.07
SGCE-210ENST00000472326 HSP90AA4PQ58FG1 418 aa2.11□□□□□ -2.07
SGCE-210ENST00000472326 CLEC12AQ5QGZ9 265 aa2.11□□□□□ -2.07
SGCE-210ENST00000472326 AADACL4Q5VUY2 407 aa2.11□□□□□ -2.07
SGCE-210ENST00000472326 RNASE11Q8TAA1 199 aaKnown RBP2.11□□□□□ -2.07
SGCE-210ENST00000472326 SCGB1C1Q8TD33 95 aa2.11□□□□□ -2.07
SGCE-210ENST00000472326 TSSK6Q9BXA6 273 aa2.11□□□□□ -2.07
SGCE-210ENST00000472326 ULBP1Q9BZM6 244 aa2.11□□□□□ -2.07
SGCE-210ENST00000472326 OR2D2Q9H210 308 aa2.11□□□□□ -2.07
SGCE-210ENST00000472326 XKR8Q9H6D3 395 aa2.11□□□□□ -2.07
SGCE-210ENST00000472326 PLEKHA1Q9HB21 404 aa2.11□□□□□ -2.07
SGCE-210ENST00000472326 C14orf166Q9Y224 244 aaKnown RBP2.11□□□□□ -2.07
SGCE-210ENST00000472326 GOLGA4Q13439 2230 aaKnown RBP2.1□□□□□ -2.07
SGCE-210ENST00000472326 ATG2BQ96BY7 2078 aa2.1□□□□□ -2.07
SGCE-210ENST00000472326 HIVEP1P15822 2718 aa2.1□□□□□ -2.07
SGCE-210ENST00000472326 ANKHD1Q8IWZ3 2542 aaKnown RBP2.1□□□□□ -2.07
SGCE-210ENST00000472326 TRAV8-7A0A075B6U6 113 aa2.1□□□□□ -2.07
SGCE-210ENST00000472326 SLC5A10A0PJK1 596 aa2.1□□□□□ -2.07
SGCE-210ENST00000472326 SEC14L6B5MCN3 397 aa2.1□□□□□ -2.07
SGCE-210ENST00000472326 PDYNP01213 254 aa2.1□□□□□ -2.07
SGCE-210ENST00000472326 DYNC1I2Q13409 638 aaKnown RBP2.1□□□□□ -2.07
SGCE-210ENST00000472326 CASP8Q14790 479 aa2.1□□□□□ -2.07
SGCE-210ENST00000472326 WDR43Q15061 677 aaKnown RBP eCLIP2.1□□□□□ -2.07
SGCE-210ENST00000472326 VAMP3Q15836 100 aa2.1□□□□□ -2.07
SGCE-210ENST00000472326 ZNF321PQ8N8H1 164 aa2.1□□□□□ -2.07
SGCE-210ENST00000472326 OR5C1Q8NGR4 320 aa2.1□□□□□ -2.07
SGCE-210ENST00000472326 TWIST2Q8WVJ9 160 aa2.1□□□□□ -2.07
SGCE-210ENST00000472326 FMC1Q96HJ9 113 aa2.1□□□□□ -2.07
SGCE-210ENST00000472326 LZTFL1Q9NQ48 299 aa2.1□□□□□ -2.07
SGCE-210ENST00000472326 AP3M1Q9Y2T2 418 aa2.1□□□□□ -2.07
SGCE-210ENST00000472326 CSMD2Q7Z408 3487 aa2.1□□□□□ -2.07
SGCE-210ENST00000472326 LAMA4Q16363 1823 aa2.1□□□□□ -2.07
SGCE-210ENST00000472326 PARP14Q460N5 1801 aa2.1□□□□□ -2.07
SGCE-210ENST00000472326 ATRQ13535 2644 aa2.09□□□□□ -2.07
SGCE-210ENST00000472326 A0A1W2PPV4 95 aa2.09□□□□□ -2.07
SGCE-210ENST00000472326 UPK2O00526 184 aa2.09□□□□□ -2.07
SGCE-210ENST00000472326 ALOX12BO75342 701 aa2.09□□□□□ -2.07
SGCE-210ENST00000472326 ETHE1O95571 254 aa2.09□□□□□ -2.07
SGCE-210ENST00000472326 CNTFRP26992 372 aa2.09□□□□□ -2.07
SGCE-210ENST00000472326 HTR2CP28335 458 aa2.09□□□□□ -2.07
SGCE-210ENST00000472326 IL12BP29460 328 aa2.09□□□□□ -2.07
SGCE-210ENST00000472326 HOXA6P31267 233 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms