RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 ZNF580Q9UK33 172 aa7.07□□□□□ -1.28
USF1-204ENST00000472217 WI2-2373I1.2A0A1W2PRP0 233 aa7.06□□□□□ -1.28
USF1-204ENST00000472217 ERICH4A6NGS2 130 aa7.06□□□□□ -1.28
USF1-204ENST00000472217 CCL24O00175 119 aa7.06□□□□□ -1.28
USF1-204ENST00000472217 NBR2O15453 112 aa7.06□□□□□ -1.28
USF1-204ENST00000472217 HLA-DRB1P01911 266 aa7.06□□□□□ -1.28
USF1-204ENST00000472217 PSMB8P28062 276 aa7.06□□□□□ -1.28
USF1-204ENST00000472217 CDX1P47902 265 aaPredicted RBP7.06□□□□□ -1.28
USF1-204ENST00000472217 HSPA13P48723 471 aa7.06□□□□□ -1.28
USF1-204ENST00000472217 VEGFCP49767 419 aa7.06□□□□□ -1.28
USF1-204ENST00000472217 HLA-DRB3P79483 266 aa7.06□□□□□ -1.28
USF1-204ENST00000472217 SSX1Q16384 188 aa7.06□□□□□ -1.28
USF1-204ENST00000472217 RPL39P5Q59GN2 51 aa7.06□□□□□ -1.28
USF1-204ENST00000472217 FAM71F2Q6NXP2 309 aa7.06□□□□□ -1.28
USF1-204ENST00000472217 FAM131AQ6UXB0 335 aa7.06□□□□□ -1.28
USF1-204ENST00000472217 FAM3DQ96BQ1 224 aa7.06□□□□□ -1.28
USF1-204ENST00000472217 ARHGAP5-AS1Q96IT6 56 aa7.06□□□□□ -1.28
USF1-204ENST00000472217 ABHD14BQ96IU4 210 aa7.06□□□□□ -1.28
USF1-204ENST00000472217 KCTD7Q96MP8 289 aa7.06□□□□□ -1.28
USF1-204ENST00000472217 MCRIP2Q9BUT9 160 aaKnown RBP7.06□□□□□ -1.28
USF1-204ENST00000472217 PECRQ9BY49 303 aa7.06□□□□□ -1.28
USF1-204ENST00000472217 GPR61Q9BZJ8 451 aa7.06□□□□□ -1.28
USF1-204ENST00000472217 ACOT13Q9NPJ3 140 aa7.06□□□□□ -1.28
USF1-204ENST00000472217 C12orf4Q9NQ89 552 aa7.06□□□□□ -1.28
USF1-204ENST00000472217 PIPOXQ9P0Z9 390 aa7.06□□□□□ -1.28
USF1-204ENST00000472217 OR1A1Q9P1Q5 309 aa7.06□□□□□ -1.28
USF1-204ENST00000472217 SLC23A1Q9UHI7 598 aa7.06□□□□□ -1.28
USF1-204ENST00000472217 HSF4Q9ULV5 492 aa7.06□□□□□ -1.28
USF1-204ENST00000472217 V9GY05 133 aa7.06□□□□□ -1.28
USF1-204ENST00000472217 NOTCH3Q9UM47 2321 aa7.05□□□□□ -1.28
USF1-204ENST00000472217 IGHV7-81A0A0B4J1V7 117 aa7.05□□□□□ -1.28
USF1-204ENST00000472217 G3V318 75 aa7.05□□□□□ -1.28
USF1-204ENST00000472217 ITGB1BP1O14713 200 aa7.05□□□□□ -1.28
USF1-204ENST00000472217 RAB29O14966 203 aa7.05□□□□□ -1.28
USF1-204ENST00000472217 LDLRAD4O15165 306 aa7.05□□□□□ -1.28
USF1-204ENST00000472217 ATP6V0E1O15342 81 aa7.05□□□□□ -1.28
USF1-204ENST00000472217 DENRO43583 198 aaKnown RBP7.05□□□□□ -1.28
USF1-204ENST00000472217 NDUFA3O95167 84 aa7.05□□□□□ -1.28
USF1-204ENST00000472217 SCTP09683 121 aa7.05□□□□□ -1.28
USF1-204ENST00000472217 CT45A6P0DMU7 189 aa7.05□□□□□ -1.28
USF1-204ENST00000472217 CT45A5P0DMU8 189 aa7.05□□□□□ -1.28
USF1-204ENST00000472217 CT45A7P0DMV0 189 aa7.05□□□□□ -1.28
USF1-204ENST00000472217 OR5H8P0DN80 308 aa7.05□□□□□ -1.28
USF1-204ENST00000472217 ZBTB25P24278 435 aa7.05□□□□□ -1.28
USF1-204ENST00000472217 PPIFP30405 207 aaKnown RBP7.05□□□□□ -1.28
USF1-204ENST00000472217 CEACAM6P40199 344 aa7.05□□□□□ -1.28
USF1-204ENST00000472217 RAB25P57735 213 aa7.05□□□□□ -1.28
USF1-204ENST00000472217 PLA2G7Q13093 441 aa7.05□□□□□ -1.28
USF1-204ENST00000472217 KIR2DS1Q14954 304 aa7.05□□□□□ -1.28
USF1-204ENST00000472217 C5orf64Q2M2E5 130 aa7.05□□□□□ -1.28
USF1-204ENST00000472217 C2orf76Q3KRA6 126 aa7.05□□□□□ -1.28
USF1-204ENST00000472217 HES5Q5TA89 166 aa7.05□□□□□ -1.28
USF1-204ENST00000472217 GLDNQ6ZMI3 551 aaPredicted RBP7.05□□□□□ -1.28
USF1-204ENST00000472217 ZNF367Q7RTV3 350 aa7.05□□□□□ -1.28
USF1-204ENST00000472217 NPBQ8NG41 125 aa7.05□□□□□ -1.28
USF1-204ENST00000472217 OR56B1Q8NGI3 324 aa7.05□□□□□ -1.28
USF1-204ENST00000472217 OR8U1Q8NH10 309 aa7.05□□□□□ -1.28
USF1-204ENST00000472217 C4orf3Q8WVX3 66 aa7.05□□□□□ -1.28
USF1-204ENST00000472217 DPF1Q92782 380 aa7.05□□□□□ -1.28
USF1-204ENST00000472217 AGMATQ9BSE5 352 aa7.05□□□□□ -1.28
USF1-204ENST00000472217 C11orf54Q9H0W9 315 aaPredicted RBP7.05□□□□□ -1.28
USF1-204ENST00000472217 OR51J1Q9H342 316 aa7.05□□□□□ -1.28
USF1-204ENST00000472217 Q9N2K0 584 aa7.05□□□□□ -1.28
USF1-204ENST00000472217 PARP11Q9NR21 331 aa7.05□□□□□ -1.28
USF1-204ENST00000472217 KIAA1456Q9P272 454 aa7.05□□□□□ -1.28
USF1-204ENST00000472217 BLOC1S6Q9UL45 172 aa7.05□□□□□ -1.28
USF1-204ENST00000472217 MGAT4AQ9UM21 535 aa7.05□□□□□ -1.28
USF1-204ENST00000472217 WSB1Q9Y6I7 421 aa7.05□□□□□ -1.28
USF1-204ENST00000472217 TRAV41A0A0B4J266 112 aa7.04□□□□□ -1.28
USF1-204ENST00000472217 IGKV1-6A0A0C4DH72 117 aa7.04□□□□□ -1.28
USF1-204ENST00000472217 TMEM272A0A1B0GTI8 110 aa7.04□□□□□ -1.28
USF1-204ENST00000472217 SHISA3A0PJX4 238 aa7.04□□□□□ -1.28
USF1-204ENST00000472217 OR5H14A6NHG9 310 aa7.04□□□□□ -1.28
USF1-204ENST00000472217 H0YJW9 148 aa7.04□□□□□ -1.28
USF1-204ENST00000472217 HSPA12AO43301 675 aa7.04□□□□□ -1.28
USF1-204ENST00000472217 PROP1O75360 226 aa7.04□□□□□ -1.28
USF1-204ENST00000472217 PSMD7P51665 324 aa7.04□□□□□ -1.28
USF1-204ENST00000472217 OR10A3P58181 314 aa7.04□□□□□ -1.28
USF1-204ENST00000472217 NDPQ00604 133 aa7.04□□□□□ -1.28
USF1-204ENST00000472217 MOGAT2Q3SYC2 334 aa7.04□□□□□ -1.28
USF1-204ENST00000472217 PLAC9Q5JTB6 97 aa7.04□□□□□ -1.28
USF1-204ENST00000472217 LIN54Q6MZP7 749 aa7.04□□□□□ -1.28
USF1-204ENST00000472217 CD200R1LQ6Q8B3 271 aa7.04□□□□□ -1.28
USF1-204ENST00000472217 OR5AN1Q8NGI8 311 aa7.04□□□□□ -1.28
USF1-204ENST00000472217 MYOZ3Q8TDC0 251 aa7.04□□□□□ -1.28
USF1-204ENST00000472217 EDARADDQ8WWZ3 215 aa7.04□□□□□ -1.28
USF1-204ENST00000472217 CMSS1Q9BQ75 279 aaKnown RBP7.04□□□□□ -1.28
USF1-204ENST00000472217 CHCHD6Q9BRQ6 235 aa7.04□□□□□ -1.28
USF1-204ENST00000472217 KLK15Q9H2R5 256 aa7.04□□□□□ -1.28
USF1-204ENST00000472217 GHITMQ9H3K2 345 aa7.04□□□□□ -1.28
USF1-204ENST00000472217 NDUFB11Q9NX14 153 aa7.04□□□□□ -1.28
USF1-204ENST00000472217 RAB26Q9ULW5 256 aa7.04□□□□□ -1.28
USF1-204ENST00000472217 KCNK7Q9Y2U2 307 aa7.04□□□□□ -1.28
USF1-204ENST00000472217 FBXO7Q9Y3I1 522 aa7.04□□□□□ -1.28
USF1-204ENST00000472217 TRAV1-2A0A0B4J238 106 aa7.03□□□□□ -1.28
USF1-204ENST00000472217 H7C2Y5 167 aa7.03□□□□□ -1.28
USF1-204ENST00000472217 RRHO14718 337 aa7.03□□□□□ -1.28
USF1-204ENST00000472217 PDCD5O14737 125 aa7.03□□□□□ -1.28
USF1-204ENST00000472217 IGLV1-40P01703 118 aa7.03□□□□□ -1.28
USF1-204ENST00000472217 MC5RP33032 325 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms