RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 HAPLN4Q86UW8 402 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 OR13H1Q8NG92 308 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 OR8B12Q8NGG6 310 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 OR5D13Q8NGL4 314 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 OR10G9Q8NGN4 311 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 OR10G7Q8NGN6 311 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 OR1K1Q8NGR3 316 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 OR51H1Q8NH63 302 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 OR2AE1Q8NHA4 323 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 SOCS4Q8WXH5 440 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 C11orf40Q8WZ69 217 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 OR1E3Q8WZA6 343 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 ZNF501Q96CX3 271 aaPredicted RBP3.62□□□□□ -1.83
VPS50-210ENST00000471188 KLHDC7BQ96G42 594 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 SGCZQ96LD1 299 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 SIGLEC12Q96PQ1 595 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 NAA38Q9BRA0 125 aaKnown RBP3.62□□□□□ -1.83
VPS50-210ENST00000471188 NXF5Q9H1B4 397 aaKnown RBP3.62□□□□□ -1.83
VPS50-210ENST00000471188 ZNF442Q9H7R0 627 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 PSENENQ9NZ42 101 aa3.62□□□□□ -1.83
VPS50-210ENST00000471188 KNTC1P50748 2209 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 IGKV1D-43A0A0B4J1Z2 117 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 TRAV8-6A0A0B4J262 113 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 LOC102725191A0A1B0GVB3 256 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 FBLL1A6NHQ2 334 aaKnown RBP3.61□□□□□ -1.83
VPS50-210ENST00000471188 C17orf112F2Z3M2 114 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 SPRY1O43609 319 aaPredicted RBP3.61□□□□□ -1.83
VPS50-210ENST00000471188 VENTXO95231 258 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 NAPSAO96009 420 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 PPYP01298 95 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 WNT2P09544 360 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 MGST1P10620 155 aaKnown RBP3.61□□□□□ -1.83
VPS50-210ENST00000471188 ESDP10768 282 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 GP1BBP13224 206 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 CTSEP14091 401 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 IGLL1P15814 213 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 AZU1P20160 251 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 VDAC1P21796 283 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 EPHA8P29322 1005 aaPredicted RBP3.61□□□□□ -1.83
VPS50-210ENST00000471188 SRIP30626 198 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 MC5RP33032 325 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 RPS16P62249 146 aaKnown RBP3.61□□□□□ -1.83
VPS50-210ENST00000471188 SERF2P84101 59 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 ZP4Q12836 540 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 FOXL1Q12952 345 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 PMCHL1Q16048 86 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 SGCBQ16585 318 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 KRTCAP3Q53RY4 240 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 FAM71F2Q6NXP2 309 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 WDR74Q6RFH5 385 aaPredicted RBP3.61□□□□□ -1.83
VPS50-210ENST00000471188 ZNF841Q6ZN19 808 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 CENPVQ7Z7K6 275 aaPredicted RBP3.61□□□□□ -1.83
VPS50-210ENST00000471188 MUC15Q8N387 334 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 FAM89BQ8N5H3 189 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 STXBP6Q8NFX7 210 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 OR4S2Q8NH73 311 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 C16orf52Q8NHV5 167 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 RNF133Q8WVZ7 376 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 ZNF524Q96C55 264 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 DGAT2Q96PD7 388 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 RCHY1Q96PM5 261 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 OR4C12Q96R67 309 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 CLEC7AQ9BXN2 247 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 TMEM222Q9H0R3 208 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 PRDM6Q9NQX0 595 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 TAAR3PQ9P1P4 343 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 PEF1Q9UBV8 284 aaKnown RBP3.61□□□□□ -1.83
VPS50-210ENST00000471188 CD207Q9UJ71 328 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 TIMM8BQ9Y5J9 83 aaPredicted RBP3.61□□□□□ -1.83
VPS50-210ENST00000471188 HCFC2Q9Y5Z7 792 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 WNT6Q9Y6F9 365 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 TRAV9-2A0A087WT02 112 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 TRAV26-1A0A087WT03 109 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 IGKV1-9A0A0C4DH69 117 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 F5H5K5 113 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 H0Y8G0 127 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 H0YGG7 62 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 H0YIG0 161 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 ZNF324O75467 553 aaPredicted RBP3.61□□□□□ -1.83
VPS50-210ENST00000471188 TIAF1O95411 115 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 CA2P00918 260 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 FRMD6-AS1P0C7T7 363 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 SLC35E2P0CK97 266 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 STAG3L3P0CL85 134 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 ZNF16P17020 682 aaPredicted RBP3.61□□□□□ -1.83
VPS50-210ENST00000471188 CEBPBP17676 345 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 PGCP20142 388 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 CEACAM3P40198 252 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 CA7P43166 264 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 LGALS7P47929 136 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 UQCRFS1P47985 274 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 RAB9AP51151 201 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 RPS20P60866 119 aaKnown RBP3.61□□□□□ -1.83
VPS50-210ENST00000471188 YPEL3P61236 119 aaPredicted RBP3.61□□□□□ -1.83
VPS50-210ENST00000471188 PSG4Q00888 419 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 EIF3IQ13347 325 aaKnown RBP3.61□□□□□ -1.83
VPS50-210ENST00000471188 RAB30Q15771 203 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 DEFB110Q30KQ9 67 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 CARD17Q5XLA6 110 aa3.61□□□□□ -1.83
VPS50-210ENST00000471188 TMEM144Q7Z5S9 345 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms