RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 IGHG2P01859 326 aa11.2□□□□□ -0.62
TOP3B-215ENST00000470338 SNRPBP14678 240 aaKnown RBP11.2□□□□□ -0.62
TOP3B-215ENST00000470338 SCAND1P57086 179 aa11.2□□□□□ -0.62
TOP3B-215ENST00000470338 SRSF7Q16629 238 aaKnown RBP eCLIP11.2□□□□□ -0.62
TOP3B-215ENST00000470338 TIMM50Q3ZCQ8 353 aa11.2□□□□□ -0.62
TOP3B-215ENST00000470338 NDUFA11Q86Y39 141 aa11.2□□□□□ -0.62
TOP3B-215ENST00000470338 OR4A4PQ8NGN8 299 aa11.2□□□□□ -0.62
TOP3B-215ENST00000470338 EDARADDQ8WWZ3 215 aa11.2□□□□□ -0.62
TOP3B-215ENST00000470338 S1PR3Q99500 378 aa11.2□□□□□ -0.62
TOP3B-215ENST00000470338 CITED2Q99967 270 aaPredicted RBP11.2□□□□□ -0.62
TOP3B-215ENST00000470338 MRPL20Q9BYC9 149 aaKnown RBP11.2□□□□□ -0.62
TOP3B-215ENST00000470338 C11orf54Q9H0W9 315 aaPredicted RBP11.2□□□□□ -0.62
TOP3B-215ENST00000470338 VCX3AQ9NNX9 186 aa11.2□□□□□ -0.62
TOP3B-215ENST00000470338 LIN7CQ9NUP9 197 aaKnown RBP11.2□□□□□ -0.62
TOP3B-215ENST00000470338 FABP7O15540 132 aa11.19□□□□□ -0.62
TOP3B-215ENST00000470338 HSPA12AO43301 675 aa11.19□□□□□ -0.62
TOP3B-215ENST00000470338 TMEM127O75204 238 aa11.19□□□□□ -0.62
TOP3B-215ENST00000470338 DIRAS3O95661 229 aa11.19□□□□□ -0.62
TOP3B-215ENST00000470338 F2RL1P55085 397 aa11.19□□□□□ -0.62
TOP3B-215ENST00000470338 KIR2DS1Q14954 304 aa11.19□□□□□ -0.62
TOP3B-215ENST00000470338 CDNFQ49AH0 187 aa11.19□□□□□ -0.62
TOP3B-215ENST00000470338 TCTEX1D4Q5JR98 221 aa11.19□□□□□ -0.62
TOP3B-215ENST00000470338 Q6ZS49 121 aa11.19□□□□□ -0.62
TOP3B-215ENST00000470338 FAM71E2Q8N5Q1 922 aa11.19□□□□□ -0.62
TOP3B-215ENST00000470338 FAM110DQ8TAY7 271 aaPredicted RBP11.19□□□□□ -0.62
TOP3B-215ENST00000470338 LGALS14Q8TCE9 139 aa11.19□□□□□ -0.62
TOP3B-215ENST00000470338 RBMXL1Q96E39 390 aaKnown RBP11.19□□□□□ -0.62
TOP3B-215ENST00000470338 ABHD14BQ96IU4 210 aa11.19□□□□□ -0.62
TOP3B-215ENST00000470338 ABCG5Q9H222 651 aa11.19□□□□□ -0.62
TOP3B-215ENST00000470338 ELF5Q9UKW6 265 aaPredicted RBP11.19□□□□□ -0.62
TOP3B-215ENST00000470338 NOTCH1P46531 2555 aa11.19□□□□□ -0.62
TOP3B-215ENST00000470338 TRBV6-7A0A0A0MS04 114 aa11.18□□□□□ -0.62
TOP3B-215ENST00000470338 LINC01548A6NM66 108 aa11.18□□□□□ -0.62
TOP3B-215ENST00000470338 AIREO43918 545 aa11.18□□□□□ -0.62
TOP3B-215ENST00000470338 PROP1O75360 226 aa11.18□□□□□ -0.62
TOP3B-215ENST00000470338 SCGNO76038 276 aa11.18□□□□□ -0.62
TOP3B-215ENST00000470338 GSTT2P0CG29 244 aa11.18□□□□□ -0.62
TOP3B-215ENST00000470338 GSTT2BP0CG30 244 aa11.18□□□□□ -0.62
TOP3B-215ENST00000470338 CT45A6P0DMU7 189 aa11.18□□□□□ -0.62
TOP3B-215ENST00000470338 CT45A5P0DMU8 189 aa11.18□□□□□ -0.62
TOP3B-215ENST00000470338 CT45A7P0DMV0 189 aa11.18□□□□□ -0.62
TOP3B-215ENST00000470338 SERPINB10P48595 397 aa11.18□□□□□ -0.62
TOP3B-215ENST00000470338 ARFRP1Q13795 201 aa11.18□□□□□ -0.62
TOP3B-215ENST00000470338 NSUN5P1Q3KNT7 163 aa11.18□□□□□ -0.62
TOP3B-215ENST00000470338 RPL39P5Q59GN2 51 aa11.18□□□□□ -0.62
TOP3B-215ENST00000470338 IGSF11Q5DX21 431 aa11.18□□□□□ -0.62
TOP3B-215ENST00000470338 C10orf99Q6UWK7 81 aa11.18□□□□□ -0.62
TOP3B-215ENST00000470338 SLC35E3Q7Z769 313 aa11.18□□□□□ -0.62
TOP3B-215ENST00000470338 CHPT1Q8WUD6 406 aa11.18□□□□□ -0.62
TOP3B-215ENST00000470338 CABLES2Q9BTV7 478 aa11.18□□□□□ -0.62
TOP3B-215ENST00000470338 RHBDL2Q9NX52 303 aa11.18□□□□□ -0.62
TOP3B-215ENST00000470338 RDH8Q9NYR8 311 aa11.18□□□□□ -0.62
TOP3B-215ENST00000470338 ZNF230Q9UIE0 474 aaPredicted RBP11.18□□□□□ -0.62
TOP3B-215ENST00000470338 ETV7Q9Y603 341 aa11.18□□□□□ -0.62
TOP3B-215ENST00000470338 PSMB11A5LHX3 300 aa11.17□□□□□ -0.62
TOP3B-215ENST00000470338 GSTP1P09211 210 aaKnown RBP11.17□□□□□ -0.62
TOP3B-215ENST00000470338 DTYMKP23919 212 aa11.17□□□□□ -0.62
TOP3B-215ENST00000470338 TGFBR1P36897 503 aa11.17□□□□□ -0.62
TOP3B-215ENST00000470338 TALDO1P37837 337 aa11.17□□□□□ -0.62
TOP3B-215ENST00000470338 GPR12P47775 334 aa11.17□□□□□ -0.62
TOP3B-215ENST00000470338 ZNF260Q3ZCT1 412 aa11.17□□□□□ -0.62
TOP3B-215ENST00000470338 IDNKQ5T6J7 187 aa11.17□□□□□ -0.62
TOP3B-215ENST00000470338 HACD4Q5VWC8 232 aa11.17□□□□□ -0.62
TOP3B-215ENST00000470338 OR5H6Q8NGV6 325 aa11.17□□□□□ -0.62
TOP3B-215ENST00000470338 MAFIPQ8WZ33 124 aa11.17□□□□□ -0.62
TOP3B-215ENST00000470338 PHF21AQ96BD5 680 aa11.17□□□□□ -0.62
TOP3B-215ENST00000470338 SLC25A38Q96DW6 304 aa11.17□□□□□ -0.62
TOP3B-215ENST00000470338 RITA1Q96K30 269 aa11.17□□□□□ -0.62
TOP3B-215ENST00000470338 NOL4LQ96MY1 436 aaPredicted RBP11.17□□□□□ -0.62
TOP3B-215ENST00000470338 RASL11BQ9BPW5 248 aa11.17□□□□□ -0.62
TOP3B-215ENST00000470338 IGKV1D-8A0A087WSZ0 117 aa11.16□□□□□ -0.62
TOP3B-215ENST00000470338 BET1O15155 118 aa11.16□□□□□ -0.62
TOP3B-215ENST00000470338 OPN1MWP04001 364 aa11.16□□□□□ -0.62
TOP3B-215ENST00000470338 OPN1MW2P0DN77 364 aa11.16□□□□□ -0.62
TOP3B-215ENST00000470338 OPN1MW3P0DN78 364 aa11.16□□□□□ -0.62
TOP3B-215ENST00000470338 MC5RP33032 325 aa11.16□□□□□ -0.62
TOP3B-215ENST00000470338 RPS19P39019 145 aaKnown RBP11.16□□□□□ -0.62
TOP3B-215ENST00000470338 ACTBP60709 375 aa11.16□□□□□ -0.62
TOP3B-215ENST00000470338 PNLIPRP3Q17RR3 467 aa11.16□□□□□ -0.62
TOP3B-215ENST00000470338 CROCCP3Q8IVE0 287 aa11.16□□□□□ -0.62
TOP3B-215ENST00000470338 FOXRED2Q8IWF2 684 aa11.16□□□□□ -0.62
TOP3B-215ENST00000470338 NPBQ8NG41 125 aa11.16□□□□□ -0.62
TOP3B-215ENST00000470338 OR4X2Q8NGF9 303 aa11.16□□□□□ -0.62
TOP3B-215ENST00000470338 OR5AN1Q8NGI8 311 aa11.16□□□□□ -0.62
TOP3B-215ENST00000470338 OR10J5Q8NHC4 309 aa11.16□□□□□ -0.62
TOP3B-215ENST00000470338 DCSTAMPQ9H295 470 aa11.16□□□□□ -0.62
TOP3B-215ENST00000470338 RNF150Q9ULK6 438 aa11.16□□□□□ -0.62
TOP3B-215ENST00000470338 SPATA2Q9UM82 520 aa11.16□□□□□ -0.62
TOP3B-215ENST00000470338 GAB2Q9UQC2 676 aa11.16□□□□□ -0.62
TOP3B-215ENST00000470338 TSSC4Q9Y5U2 329 aaPredicted RBP11.16□□□□□ -0.62
TOP3B-215ENST00000470338 TCRBV4S1A1TA0A5B7 111 aa11.15□□□□□ -0.62
TOP3B-215ENST00000470338 OR5H14A6NHG9 310 aa11.15□□□□□ -0.62
TOP3B-215ENST00000470338 AP4M1O00189 453 aa11.15□□□□□ -0.62
TOP3B-215ENST00000470338 KCNAB3O43448 404 aa11.15□□□□□ -0.62
TOP3B-215ENST00000470338 CNTFRP26992 372 aa11.15□□□□□ -0.62
TOP3B-215ENST00000470338 SOX6P35712 828 aa11.15□□□□□ -0.62
TOP3B-215ENST00000470338 PITPNAQ00169 270 aa11.15□□□□□ -0.62
TOP3B-215ENST00000470338 MMDQ15546 238 aa11.15□□□□□ -0.62
TOP3B-215ENST00000470338 FAM131AQ6UXB0 335 aa11.15□□□□□ -0.62
TOP3B-215ENST00000470338 ZNF329Q86UD4 541 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms