RNA–Protein interactions for RNA: ENST00000470115.1

GTF3C2-209, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-209ENST00000470115 NABP2Q9BQ15 211 aa12.9□□□□□ -0.34
GTF3C2-209ENST00000470115 HSPB9Q9BQS6 159 aa12.9□□□□□ -0.34
GTF3C2-209ENST00000470115 FUNDC2Q9BWH2 189 aa12.9□□□□□ -0.34
GTF3C2-209ENST00000470115 MRPL20Q9BYC9 149 aaKnown RBP12.9□□□□□ -0.34
GTF3C2-209ENST00000470115 SHISA3A0PJX4 238 aa12.89□□□□□ -0.35
GTF3C2-209ENST00000470115 FOXI3A8MTJ6 420 aaPredicted RBP12.89□□□□□ -0.35
GTF3C2-209ENST00000470115 SOX6P35712 828 aa12.89□□□□□ -0.35
GTF3C2-209ENST00000470115 OR10A3P58181 314 aa12.89□□□□□ -0.35
GTF3C2-209ENST00000470115 PNLIPRP3Q17RR3 467 aa12.89□□□□□ -0.35
GTF3C2-209ENST00000470115 ETV3LQ6ZN32 361 aa12.89□□□□□ -0.35
GTF3C2-209ENST00000470115 ZNF833PQ6ZTB9 187 aa12.89□□□□□ -0.35
GTF3C2-209ENST00000470115 MOB1BQ7L9L4 216 aa12.89□□□□□ -0.35
GTF3C2-209ENST00000470115 REC114Q7Z4M0 266 aa12.89□□□□□ -0.35
GTF3C2-209ENST00000470115 COMMD1Q8N668 190 aa12.89□□□□□ -0.35
GTF3C2-209ENST00000470115 ARHGAP5-AS1Q96IT6 56 aa12.89□□□□□ -0.35
GTF3C2-209ENST00000470115 PECRQ9BY49 303 aa12.89□□□□□ -0.35
GTF3C2-209ENST00000470115 PARP12Q9H0J9 701 aaKnown RBP12.89□□□□□ -0.35
GTF3C2-209ENST00000470115 RIMS4Q9H426 269 aaPredicted RBP12.89□□□□□ -0.35
GTF3C2-209ENST00000470115 ZFP57Q9NU63 452 aa12.89□□□□□ -0.35
GTF3C2-209ENST00000470115 NECAP2Q9NVZ3 263 aa12.89□□□□□ -0.35
GTF3C2-209ENST00000470115 STEAP1Q9UHE8 339 aa12.89□□□□□ -0.35
GTF3C2-209ENST00000470115 HSF4Q9ULV5 492 aa12.89□□□□□ -0.35
GTF3C2-209ENST00000470115 SAA2-SAA4A0A096LPE2 208 aa12.88□□□□□ -0.35
GTF3C2-209ENST00000470115 TRBV6-6A0A0A6YYG2 114 aa12.88□□□□□ -0.35
GTF3C2-209ENST00000470115 NUDT19A8MXV4 375 aa12.88□□□□□ -0.35
GTF3C2-209ENST00000470115 ST8SIA5O15466 376 aa12.88□□□□□ -0.35
GTF3C2-209ENST00000470115 TFAP2AP05549 437 aa12.88□□□□□ -0.35
GTF3C2-209ENST00000470115 SAA2P0DJI9 122 aaPredicted RBP12.88□□□□□ -0.35
GTF3C2-209ENST00000470115 SLC2A2P11168 524 aaPredicted RBP12.88□□□□□ -0.35
GTF3C2-209ENST00000470115 CNTFRP26992 372 aa12.88□□□□□ -0.35
GTF3C2-209ENST00000470115 SDC2P34741 201 aa12.88□□□□□ -0.35
GTF3C2-209ENST00000470115 ACTBP60709 375 aa12.88□□□□□ -0.35
GTF3C2-209ENST00000470115 PLA2G7Q13093 441 aa12.88□□□□□ -0.35
GTF3C2-209ENST00000470115 MMDQ15546 238 aa12.88□□□□□ -0.35
GTF3C2-209ENST00000470115 GPR107Q5VW38 600 aa12.88□□□□□ -0.35
GTF3C2-209ENST00000470115 TEX38Q6PEX7 206 aa12.88□□□□□ -0.35
GTF3C2-209ENST00000470115 LCNL1Q6ZST4 164 aa12.88□□□□□ -0.35
GTF3C2-209ENST00000470115 C8orf86Q6ZUL3 223 aa12.88□□□□□ -0.35
GTF3C2-209ENST00000470115 TPRA1Q86W33 373 aa12.88□□□□□ -0.35
GTF3C2-209ENST00000470115 MRPL41Q8IXM3 137 aaKnown RBP12.88□□□□□ -0.35
GTF3C2-209ENST00000470115 LINC00482Q8N8I6 264 aa12.88□□□□□ -0.35
GTF3C2-209ENST00000470115 RCC1LQ96I51 464 aaKnown RBP12.88□□□□□ -0.35
GTF3C2-209ENST00000470115 IFI27L2Q9H2X8 130 aa12.88□□□□□ -0.35
GTF3C2-209ENST00000470115 AURKAIP1Q9NWT8 199 aaPredicted RBP12.88□□□□□ -0.35
GTF3C2-209ENST00000470115 TMEM272A0A1B0GTI8 110 aa12.87□□□□□ -0.35
GTF3C2-209ENST00000470115 LDLRAD4O15165 306 aa12.87□□□□□ -0.35
GTF3C2-209ENST00000470115 RPLP1P05386 114 aaKnown RBP12.87□□□□□ -0.35
GTF3C2-209ENST00000470115 TGFBR1P36897 503 aa12.87□□□□□ -0.35
GTF3C2-209ENST00000470115 RPL5P46777 297 aaKnown RBP12.87□□□□□ -0.35
GTF3C2-209ENST00000470115 ALDH3B2P48448 385 aa12.87□□□□□ -0.35
GTF3C2-209ENST00000470115 THBS3P49746 956 aa12.87□□□□□ -0.35
GTF3C2-209ENST00000470115 KLHL30-AS1Q8NEE0 82 aa12.87□□□□□ -0.35
GTF3C2-209ENST00000470115 OR56B1Q8NGI3 324 aa12.87□□□□□ -0.35
GTF3C2-209ENST00000470115 GON7Q9BXV9 100 aa12.87□□□□□ -0.35
GTF3C2-209ENST00000470115 Q9N2K0 584 aa12.87□□□□□ -0.35
GTF3C2-209ENST00000470115 OR1A1Q9P1Q5 309 aa12.87□□□□□ -0.35
GTF3C2-209ENST00000470115 SLC23A1Q9UHI7 598 aa12.87□□□□□ -0.35
GTF3C2-209ENST00000470115 IFITM5A6NNB3 132 aa12.86□□□□□ -0.35
GTF3C2-209ENST00000470115 CLEC2LP0C7M8 214 aa12.86□□□□□ -0.35
GTF3C2-209ENST00000470115 CEACAM6P40199 344 aa12.86□□□□□ -0.35
GTF3C2-209ENST00000470115 RANBP1P43487 201 aa12.86□□□□□ -0.35
GTF3C2-209ENST00000470115 SERPINB10P48595 397 aa12.86□□□□□ -0.35
GTF3C2-209ENST00000470115 VBP1P61758 197 aa12.86□□□□□ -0.35
GTF3C2-209ENST00000470115 HLA-DRB3P79483 266 aa12.86□□□□□ -0.35
GTF3C2-209ENST00000470115 RPL39P5Q59GN2 51 aa12.86□□□□□ -0.35
GTF3C2-209ENST00000470115 PLAC9Q5JTB6 97 aa12.86□□□□□ -0.35
GTF3C2-209ENST00000470115 CLVS1Q8IUQ0 354 aaPredicted RBP12.86□□□□□ -0.35
GTF3C2-209ENST00000470115 ZNF695Q8IW36 515 aa12.86□□□□□ -0.35
GTF3C2-209ENST00000470115 MRAPQ8TCY5 172 aa12.86□□□□□ -0.35
GTF3C2-209ENST00000470115 ABHD14BQ96IU4 210 aa12.86□□□□□ -0.35
GTF3C2-209ENST00000470115 CMSS1Q9BQ75 279 aaKnown RBP12.86□□□□□ -0.35
GTF3C2-209ENST00000470115 ZNF251Q9BRH9 671 aa12.86□□□□□ -0.35
GTF3C2-209ENST00000470115 NAA50Q9GZZ1 169 aaKnown RBP12.86□□□□□ -0.35
GTF3C2-209ENST00000470115 C12orf4Q9NQ89 552 aa12.86□□□□□ -0.35
GTF3C2-209ENST00000470115 PIPOXQ9P0Z9 390 aa12.86□□□□□ -0.35
GTF3C2-209ENST00000470115 ZNF107Q9UII5 783 aaPredicted RBP12.86□□□□□ -0.35
GTF3C2-209ENST00000470115 RAB22AQ9UL26 194 aa12.86□□□□□ -0.35
GTF3C2-209ENST00000470115 MGAT4AQ9UM21 535 aa12.86□□□□□ -0.35
GTF3C2-209ENST00000470115 NOTOA8MTQ0 251 aa12.85□□□□□ -0.35
GTF3C2-209ENST00000470115 RAB29O14966 203 aa12.85□□□□□ -0.35
GTF3C2-209ENST00000470115 HSPA12AO43301 675 aa12.85□□□□□ -0.35
GTF3C2-209ENST00000470115 NOL3O60936 208 aaKnown RBP12.85□□□□□ -0.35
GTF3C2-209ENST00000470115 SCTP09683 121 aa12.85□□□□□ -0.35
GTF3C2-209ENST00000470115 CT45A6P0DMU7 189 aa12.85□□□□□ -0.35
GTF3C2-209ENST00000470115 CT45A5P0DMU8 189 aa12.85□□□□□ -0.35
GTF3C2-209ENST00000470115 CT45A7P0DMV0 189 aa12.85□□□□□ -0.35
GTF3C2-209ENST00000470115 MYCNOSP40205 109 aa12.85□□□□□ -0.35
GTF3C2-209ENST00000470115 NCS1P62166 190 aa12.85□□□□□ -0.35
GTF3C2-209ENST00000470115 FOXE3Q13461 319 aa12.85□□□□□ -0.35
GTF3C2-209ENST00000470115 CXorf66Q5JRM2 361 aaPredicted RBP12.85□□□□□ -0.35
GTF3C2-209ENST00000470115 AGMATQ9BSE5 352 aa12.85□□□□□ -0.35
GTF3C2-209ENST00000470115 C11orf54Q9H0W9 315 aaPredicted RBP12.85□□□□□ -0.35
GTF3C2-209ENST00000470115 DAPK2Q9UIK4 370 aa12.85□□□□□ -0.35
GTF3C2-209ENST00000470115 ITGB1BP1O14713 200 aa12.84□□□□□ -0.35
GTF3C2-209ENST00000470115 NBR2O15453 112 aa12.84□□□□□ -0.35
GTF3C2-209ENST00000470115 IGF1P05019 195 aa12.84□□□□□ -0.35
GTF3C2-209ENST00000470115 ELANEP08246 267 aa12.84□□□□□ -0.35
GTF3C2-209ENST00000470115 VDAC1P21796 283 aa12.84□□□□□ -0.35
GTF3C2-209ENST00000470115 ZBTB25P24278 435 aa12.84□□□□□ -0.35
GTF3C2-209ENST00000470115 SLC6A1P30531 599 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms