RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 LRRN3E7EW58 273 aa2.03□□□□□ -2.08
CDC42BPA-211ENST00000466538 G3V3Q6 166 aa2.03□□□□□ -2.08
CDC42BPA-211ENST00000466538 H0Y980 276 aa2.03□□□□□ -2.08
CDC42BPA-211ENST00000466538 K7EQS6 105 aa2.03□□□□□ -2.08
CDC42BPA-211ENST00000466538 CCRL2O00421 344 aa2.03□□□□□ -2.08
CDC42BPA-211ENST00000466538 TP53I11O14683 189 aa2.03□□□□□ -2.08
CDC42BPA-211ENST00000466538 TGOLN2O43493 480 aa2.03□□□□□ -2.08
CDC42BPA-211ENST00000466538 RPP14O95059 124 aaKnown RBP2.03□□□□□ -2.08
CDC42BPA-211ENST00000466538 LYPLA2O95372 231 aa2.03□□□□□ -2.08
CDC42BPA-211ENST00000466538 CTSGP08311 255 aa2.03□□□□□ -2.08
CDC42BPA-211ENST00000466538 OCM2P0CE71 109 aa2.03□□□□□ -2.08
CDC42BPA-211ENST00000466538 FUSP35637 526 aaKnown RBP eCLIP2.03□□□□□ -2.08
CDC42BPA-211ENST00000466538 SULT1A2P50226 295 aa2.03□□□□□ -2.08
CDC42BPA-211ENST00000466538 KRTAP10-1P60331 282 aa2.03□□□□□ -2.08
CDC42BPA-211ENST00000466538 BASP1P80723 227 aaKnown RBP2.03□□□□□ -2.08
CDC42BPA-211ENST00000466538 C1DQ13901 141 aaKnown RBP2.03□□□□□ -2.08
CDC42BPA-211ENST00000466538 TRMT12Q53H54 448 aaKnown RBP2.03□□□□□ -2.08
CDC42BPA-211ENST00000466538 CLVS2Q5SYC1 327 aa2.03□□□□□ -2.08
CDC42BPA-211ENST00000466538 NOXRED1Q6NXP6 359 aa2.03□□□□□ -2.08
CDC42BPA-211ENST00000466538 SCXQ7RTU7 201 aa2.03□□□□□ -2.08
CDC42BPA-211ENST00000466538 Q8N402 240 aa2.03□□□□□ -2.08
CDC42BPA-211ENST00000466538 ZFAND2AQ8N6M9 145 aa2.03□□□□□ -2.08
CDC42BPA-211ENST00000466538 HAVCR2Q8TDQ0 301 aa2.03□□□□□ -2.08
CDC42BPA-211ENST00000466538 GPR119Q8TDV5 335 aa2.03□□□□□ -2.08
CDC42BPA-211ENST00000466538 TNFAIP8L1Q8WVP5 186 aa2.03□□□□□ -2.08
CDC42BPA-211ENST00000466538 CMTM5Q96DZ9 223 aa2.03□□□□□ -2.08
CDC42BPA-211ENST00000466538 SMIM19Q96E16 107 aa2.03□□□□□ -2.08
CDC42BPA-211ENST00000466538 TMEM208Q9BTX3 173 aa2.03□□□□□ -2.08
CDC42BPA-211ENST00000466538 MED18Q9BUE0 208 aa2.03□□□□□ -2.08
CDC42BPA-211ENST00000466538 SPANXB1Q9NS25 103 aaPredicted RBP2.03□□□□□ -2.08
CDC42BPA-211ENST00000466538 MRPL16Q9NX20 251 aaKnown RBP2.03□□□□□ -2.08
CDC42BPA-211ENST00000466538 TP53TG1Q9Y2A0 90 aa2.03□□□□□ -2.08
CDC42BPA-211ENST00000466538 ZNF337Q9Y3M9 751 aa2.03□□□□□ -2.08
CDC42BPA-211ENST00000466538 SNX10Q9Y5X0 201 aa2.03□□□□□ -2.08
CDC42BPA-211ENST00000466538 CACNA1DQ01668 2161 aa2.02□□□□□ -2.09
CDC42BPA-211ENST00000466538 SDK2Q58EX2 2172 aa2.02□□□□□ -2.09
CDC42BPA-211ENST00000466538 M0QZ92 97 aa2.02□□□□□ -2.09
CDC42BPA-211ENST00000466538 SLC16A4O15374 487 aa2.02□□□□□ -2.09
CDC42BPA-211ENST00000466538 TCRBP04435 133 aa2.02□□□□□ -2.09
CDC42BPA-211ENST00000466538 HSD11B1P28845 292 aa2.02□□□□□ -2.09
CDC42BPA-211ENST00000466538 PSMB3P49720 205 aa2.02□□□□□ -2.09
CDC42BPA-211ENST00000466538 AP3S2P59780 193 aa2.02□□□□□ -2.09
CDC42BPA-211ENST00000466538 CXCR4P61073 352 aa2.02□□□□□ -2.09
CDC42BPA-211ENST00000466538 RANP62826 216 aaKnown RBP2.02□□□□□ -2.09
CDC42BPA-211ENST00000466538 CCL7P80098 99 aa2.02□□□□□ -2.09
CDC42BPA-211ENST00000466538 STX5Q13190 355 aa2.02□□□□□ -2.09
CDC42BPA-211ENST00000466538 DNAL1Q4LDG9 190 aa2.02□□□□□ -2.09
CDC42BPA-211ENST00000466538 DNM1P34Q6PK57 102 aa2.02□□□□□ -2.09
CDC42BPA-211ENST00000466538 C10orf67Q8IYJ2 551 aa2.02□□□□□ -2.09
CDC42BPA-211ENST00000466538 OR1M1Q8NGA1 313 aa2.02□□□□□ -2.09
CDC42BPA-211ENST00000466538 OR10P1Q8NGE3 313 aa2.02□□□□□ -2.09
CDC42BPA-211ENST00000466538 LMX1AQ8TE12 382 aa2.02□□□□□ -2.09
CDC42BPA-211ENST00000466538 PACRGQ96M98 296 aaPredicted RBP2.02□□□□□ -2.09
CDC42BPA-211ENST00000466538 OR51V1Q9H2C8 321 aa2.02□□□□□ -2.09
CDC42BPA-211ENST00000466538 VCX3BQ9H321 246 aa2.02□□□□□ -2.09
CDC42BPA-211ENST00000466538 COL18A1P39060 1754 aa2.02□□□□□ -2.09
CDC42BPA-211ENST00000466538 C9orf84Q5VXU9 1444 aa2.01□□□□□ -2.09
CDC42BPA-211ENST00000466538 ABCC11Q96J66 1382 aa2.01□□□□□ -2.09
CDC42BPA-211ENST00000466538 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.01□□□□□ -2.09
CDC42BPA-211ENST00000466538 CXCR6O00574 342 aa2.01□□□□□ -2.09
CDC42BPA-211ENST00000466538 COPEO14579 308 aa2.01□□□□□ -2.09
CDC42BPA-211ENST00000466538 STX10O60499 249 aa2.01□□□□□ -2.09
CDC42BPA-211ENST00000466538 ATP6V1G2O95670 118 aa2.01□□□□□ -2.09
CDC42BPA-211ENST00000466538 HBZP02008 142 aa2.01□□□□□ -2.09
CDC42BPA-211ENST00000466538 CRYBA1P05813 215 aa2.01□□□□□ -2.09
CDC42BPA-211ENST00000466538 OR4A8P0C604 315 aa2.01□□□□□ -2.09
CDC42BPA-211ENST00000466538 ADORA1P30542 326 aa2.01□□□□□ -2.09
CDC42BPA-211ENST00000466538 H2BFSP57053 126 aa2.01□□□□□ -2.09
CDC42BPA-211ENST00000466538 VBP1P61758 197 aa2.01□□□□□ -2.09
CDC42BPA-211ENST00000466538 DAD1P61803 113 aa2.01□□□□□ -2.09
CDC42BPA-211ENST00000466538 HLA-DRB5Q30154 266 aa2.01□□□□□ -2.09
CDC42BPA-211ENST00000466538 XKRXQ6PP77 449 aa2.01□□□□□ -2.09
CDC42BPA-211ENST00000466538 CD200R1LQ6Q8B3 271 aa2.01□□□□□ -2.09
CDC42BPA-211ENST00000466538 SDIM1Q6ZPB5 146 aa2.01□□□□□ -2.09
CDC42BPA-211ENST00000466538 YIPF7Q8N8F6 280 aa2.01□□□□□ -2.09
CDC42BPA-211ENST00000466538 OR10D4PQ8NGN7 298 aa2.01□□□□□ -2.09
CDC42BPA-211ENST00000466538 OR2V1Q8NHB1 315 aa2.01□□□□□ -2.09
CDC42BPA-211ENST00000466538 ZCCHC13Q8WW36 166 aaKnown RBP2.01□□□□□ -2.09
CDC42BPA-211ENST00000466538 PPP1R14BQ96C90 147 aa2.01□□□□□ -2.09
CDC42BPA-211ENST00000466538 CDCA4Q9BXL8 241 aa2.01□□□□□ -2.09
CDC42BPA-211ENST00000466538 EIF5A2Q9GZV4 153 aaKnown RBP2.01□□□□□ -2.09
CDC42BPA-211ENST00000466538 OR51B6Q9H340 312 aa2.01□□□□□ -2.09
CDC42BPA-211ENST00000466538 SLC22A13Q9Y226 551 aa2.01□□□□□ -2.09
CDC42BPA-211ENST00000466538 PRELID1Q9Y255 219 aa2.01□□□□□ -2.09
CDC42BPA-211ENST00000466538 POLR3HQ9Y535 204 aaPredicted RBP2.01□□□□□ -2.09
CDC42BPA-211ENST00000466538 OR51B4Q9Y5P0 310 aa2.01□□□□□ -2.09
CDC42BPA-211ENST00000466538 CAMSAP1Q5T5Y3 1602 aa2.01□□□□□ -2.09
CDC42BPA-211ENST00000466538 PCF11O94913 1555 aaKnown RBP2.01□□□□□ -2.09
CDC42BPA-211ENST00000466538 PTPRJQ12913 1337 aa2□□□□□ -2.09
CDC42BPA-211ENST00000466538 LINC00862A6NCI5 91 aa2□□□□□ -2.09
CDC42BPA-211ENST00000466538 OR5K4A6NMS3 321 aa2□□□□□ -2.09
CDC42BPA-211ENST00000466538 TMEM114B3SHH9 223 aa2□□□□□ -2.09
CDC42BPA-211ENST00000466538 GOLGA6L19H0YKK7 550 aa2□□□□□ -2.09
CDC42BPA-211ENST00000466538 J3QRE1 110 aa2□□□□□ -2.09
CDC42BPA-211ENST00000466538 AZIN1O14977 448 aa2□□□□□ -2.09
CDC42BPA-211ENST00000466538 ZNF73O43830 326 aaPredicted RBP2□□□□□ -2.09
CDC42BPA-211ENST00000466538 ARL6IP5O75915 188 aa2□□□□□ -2.09
CDC42BPA-211ENST00000466538 ASS1P00966 412 aaKnown RBP2□□□□□ -2.09
CDC42BPA-211ENST00000466538 RPS17P08708 135 aaKnown RBP2□□□□□ -2.09
CDC42BPA-211ENST00000466538 CD99P14209 185 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms