RNA–Protein interactions for RNA: ENST00000462862.1

ERCC4-203, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 3

Gene ERCC4, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-203ENST00000462862 GRPP07492 148 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 CELA3BP08861 270 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 SCTP09683 121 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 HKR1P10072 659 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 SPP1P10451 314 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 PI3P19957 117 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 HOXA5P20719 270 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 PRDX2P32119 198 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 MPV17P39210 176 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 CA7P43166 264 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 GABRA2P47869 451 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 OR3A1P47881 315 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 FABP6P51161 128 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 AKR1C2P52895 323 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 P2RX3P56373 397 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 TMEM33P57088 247 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 MRPS11P82912 194 aaKnown RBP3.46□□□□□ -1.86
ERCC4-203ENST00000462862 SERF2P84101 59 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 TNFAIP6P98066 277 aaPredicted RBP3.46□□□□□ -1.86
ERCC4-203ENST00000462862 SRSF6Q13247 344 aaKnown RBP3.46□□□□□ -1.86
ERCC4-203ENST00000462862 PMS2P11Q13670 270 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 TSC22D1Q15714 1073 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 SSX2Q16385 188 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 AANATQ16613 207 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 ATP6V1FQ16864 119 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 PHLDA2Q53GA4 152 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 PDLIM3Q53GG5 364 aaPredicted RBP3.46□□□□□ -1.86
ERCC4-203ENST00000462862 IGSF11Q5DX21 431 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 TOR2AQ5JU69 321 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 SPATA46Q5T0L3 261 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 LCE5AQ5TCM9 118 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 ALKAL2Q6UX46 152 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 WDR86Q86TI4 376 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 DOLPP1Q86YN1 238 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 SELENOHQ8IZQ5 122 aaKnown RBP3.46□□□□□ -1.86
ERCC4-203ENST00000462862 SLC7A5P1Q8MH63 180 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 SVBPQ8N300 66 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 ZNF808Q8N4W9 903 aaPredicted RBP3.46□□□□□ -1.86
ERCC4-203ENST00000462862 OR2Z1Q8NG97 314 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 OR52E5Q8NH55 327 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 LYPD6BQ8NI32 183 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 RNASE11Q8TAA1 199 aaKnown RBP3.46□□□□□ -1.86
ERCC4-203ENST00000462862 LRRC29Q8WV35 223 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 TMEM171Q8WVE6 324 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 TMEM190Q8WZ59 177 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 CORO2AQ92828 525 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 TNFRSF14Q92956 283 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 RNASE6Q93091 150 aaKnown RBP3.46□□□□□ -1.86
ERCC4-203ENST00000462862 PINX1Q96BK5 328 aaKnown RBP3.46□□□□□ -1.86
ERCC4-203ENST00000462862 OR10C1Q96KK4 312 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 C20orf173Q96LM9 149 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 TP53RKQ96S44 253 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 CLCC1Q96S66 551 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 DMRTA2Q96SC8 542 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 TSNAXQ99598 290 aaKnown RBP3.46□□□□□ -1.86
ERCC4-203ENST00000462862 GINS3Q9BRX5 216 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 PSMG3Q9BT73 122 aaPredicted RBP3.46□□□□□ -1.86
ERCC4-203ENST00000462862 GGACTQ9BVM4 153 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 ZNF665Q9H7R5 613 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 ERRFI1Q9UJM3 462 aaPredicted RBP3.46□□□□□ -1.86
ERCC4-203ENST00000462862 LINC00312Q9Y6C7 94 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 SHANK1Q9Y566 2161 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 URB1O60287 2271 aaKnown RBP3.46□□□□□ -1.86
ERCC4-203ENST00000462862 CHD6Q8TD26 2715 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 AKAP13Q12802 2813 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 SPEGQ15772 3267 aa3.46□□□□□ -1.86
ERCC4-203ENST00000462862 INTS1Q8N201 2190 aaKnown RBP3.45□□□□□ -1.86
ERCC4-203ENST00000462862 PRRC2CQ9Y520 2896 aaKnown RBP3.45□□□□□ -1.86
ERCC4-203ENST00000462862 TRBV23-1A0A0A0MS06 115 aa3.45□□□□□ -1.86
ERCC4-203ENST00000462862 TRAV1-1A0A0B4J248 108 aa3.45□□□□□ -1.86
ERCC4-203ENST00000462862 IGKV1-6A0A0C4DH72 117 aa3.45□□□□□ -1.86
ERCC4-203ENST00000462862 A0A0G2JNJ9 132 aa3.45□□□□□ -1.86
ERCC4-203ENST00000462862 KBTBD11-OT1A0A1B0GTJ5 212 aa3.45□□□□□ -1.86
ERCC4-203ENST00000462862 A0A1W2PR80 420 aa3.45□□□□□ -1.86
ERCC4-203ENST00000462862 C17orf100A8MU93 164 aa3.45□□□□□ -1.86
ERCC4-203ENST00000462862 FNDC10F2Z333 226 aa3.45□□□□□ -1.86
ERCC4-203ENST00000462862 H0YIZ8 118 aa3.45□□□□□ -1.86
ERCC4-203ENST00000462862 SIRPB1O00241 398 aa3.45□□□□□ -1.86
ERCC4-203ENST00000462862 ABCD4O14678 606 aa3.45□□□□□ -1.86
ERCC4-203ENST00000462862 RAB29O14966 203 aa3.45□□□□□ -1.86
ERCC4-203ENST00000462862 SIGLEC5O15389 551 aa3.45□□□□□ -1.86
ERCC4-203ENST00000462862 PSPNO60542 156 aa3.45□□□□□ -1.86
ERCC4-203ENST00000462862 MPDU1O75352 247 aa3.45□□□□□ -1.86
ERCC4-203ENST00000462862 HPRT1P00492 218 aa3.45□□□□□ -1.86
ERCC4-203ENST00000462862 CFDP00746 253 aaPredicted RBP3.45□□□□□ -1.86
ERCC4-203ENST00000462862 HBZP02008 142 aa3.45□□□□□ -1.86
ERCC4-203ENST00000462862 MBP02144 154 aa3.45□□□□□ -1.86
ERCC4-203ENST00000462862 CD3EP07766 207 aa3.45□□□□□ -1.86
ERCC4-203ENST00000462862 DANCRP0C864 163 aa3.45□□□□□ -1.86
ERCC4-203ENST00000462862 PSG2P11465 335 aa3.45□□□□□ -1.86
ERCC4-203ENST00000462862 BMP5P22003 454 aa3.45□□□□□ -1.86
ERCC4-203ENST00000462862 CEACAM6P40199 344 aa3.45□□□□□ -1.86
ERCC4-203ENST00000462862 SULT1A1P50225 295 aa3.45□□□□□ -1.86
ERCC4-203ENST00000462862 ZNF83P51522 516 aa3.45□□□□□ -1.86
ERCC4-203ENST00000462862 CAV2P51636 162 aa3.45□□□□□ -1.86
ERCC4-203ENST00000462862 ERVK-16P61578 105 aa3.45□□□□□ -1.86
ERCC4-203ENST00000462862 COL10A1Q03692 680 aa3.45□□□□□ -1.86
ERCC4-203ENST00000462862 TLE4Q04727 773 aa3.45□□□□□ -1.86
ERCC4-203ENST00000462862 PJVKQ0ZLH3 352 aa3.45□□□□□ -1.86
ERCC4-203ENST00000462862 ATXN7L3Q14CW9 347 aaPredicted RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms