RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 OR2S2Q9NQN1 319 aa1.6□□□□□ -2.15
RFC4-211ENST00000460408 RBM22Q9NW64 420 aaKnown RBP eCLIP1.6□□□□□ -2.15
RFC4-211ENST00000460408 SDHAF2Q9NX18 166 aa1.6□□□□□ -2.15
RFC4-211ENST00000460408 TAS2R1Q9NYW7 299 aa1.6□□□□□ -2.15
RFC4-211ENST00000460408 ZNF391Q9UJN7 358 aa1.6□□□□□ -2.15
RFC4-211ENST00000460408 INSIG2Q9Y5U4 225 aa1.6□□□□□ -2.15
RFC4-211ENST00000460408 TENM3Q9P273 2699 aa1.6□□□□□ -2.15
RFC4-211ENST00000460408 CHD3Q12873 2000 aaKnown RBP1.59□□□□□ -2.15
RFC4-211ENST00000460408 KMT2CQ8NEZ4 4911 aaKnown RBP1.59□□□□□ -2.15
RFC4-211ENST00000460408 NUP210Q8TEM1 1887 aaPredicted RBP1.59□□□□□ -2.15
RFC4-211ENST00000460408 IGKV2-24A0A0C4DH68 120 aa1.59□□□□□ -2.15
RFC4-211ENST00000460408 LOC389332A0A1B0GUA5 103 aa1.59□□□□□ -2.15
RFC4-211ENST00000460408 A0A1B0GXF2 115 aa1.59□□□□□ -2.15
RFC4-211ENST00000460408 GMNCA6NCL1 334 aa1.59□□□□□ -2.15
RFC4-211ENST00000460408 ARL5CA6NH57 179 aa1.59□□□□□ -2.15
RFC4-211ENST00000460408 IGLL5B9A064 214 aa1.59□□□□□ -2.15
RFC4-211ENST00000460408 FFAR1O14842 300 aa1.59□□□□□ -2.15
RFC4-211ENST00000460408 ZMPSTE24O75844 475 aa1.59□□□□□ -2.15
RFC4-211ENST00000460408 RLN2P04090 185 aa1.59□□□□□ -2.15
RFC4-211ENST00000460408 HTR2BP41595 481 aa1.59□□□□□ -2.15
RFC4-211ENST00000460408 SSX1Q16384 188 aa1.59□□□□□ -2.15
RFC4-211ENST00000460408 TNXAQ16473 311 aa1.59□□□□□ -2.15
RFC4-211ENST00000460408 TAF9Q16594 264 aa1.59□□□□□ -2.15
RFC4-211ENST00000460408 Q499Y3 187 aa1.59□□□□□ -2.15
RFC4-211ENST00000460408 SPIN3Q5JUX0 258 aa1.59□□□□□ -2.15
RFC4-211ENST00000460408 LDLRAD2Q5SZI1 272 aa1.59□□□□□ -2.15
RFC4-211ENST00000460408 TMEM144Q7Z5S9 345 aa1.59□□□□□ -2.15
RFC4-211ENST00000460408 OR8A1Q8NGG7 326 aa1.59□□□□□ -2.15
RFC4-211ENST00000460408 OR6K2Q8NGY2 324 aa1.59□□□□□ -2.15
RFC4-211ENST00000460408 OR51Q1Q8NH59 317 aa1.59□□□□□ -2.15
RFC4-211ENST00000460408 OR4C6Q8NH72 309 aa1.59□□□□□ -2.15
RFC4-211ENST00000460408 CDKL2Q92772 493 aa1.59□□□□□ -2.15
RFC4-211ENST00000460408 OR2M4Q96R27 311 aa1.59□□□□□ -2.15
RFC4-211ENST00000460408 RBM12B-AS1Q9P1G2 102 aa1.59□□□□□ -2.15
RFC4-211ENST00000460408 TAC3Q9UHF0 121 aa1.59□□□□□ -2.15
RFC4-211ENST00000460408 RBMX2Q9Y388 322 aaKnown RBP1.59□□□□□ -2.15
RFC4-211ENST00000460408 PTPRDP23468 1912 aa1.59□□□□□ -2.15
RFC4-211ENST00000460408 ANK1P16157 1881 aa1.58□□□□□ -2.16
RFC4-211ENST00000460408 TMEM131Q92545 1883 aa1.58□□□□□ -2.16
RFC4-211ENST00000460408 ZNF106Q9H2Y7 1883 aaKnown RBP1.58□□□□□ -2.16
RFC4-211ENST00000460408 IGKV3D-11A0A0A0MRZ8 115 aa1.58□□□□□ -2.16
RFC4-211ENST00000460408 TLCD2A6NGC4 264 aa1.58□□□□□ -2.16
RFC4-211ENST00000460408 BOLA2-SMG1P6H3BVE0 249 aa1.58□□□□□ -2.16
RFC4-211ENST00000460408 NDUFS8O00217 210 aa1.58□□□□□ -2.16
RFC4-211ENST00000460408 ISLRO14498 428 aa1.58□□□□□ -2.16
RFC4-211ENST00000460408 GYG2O15488 501 aa1.58□□□□□ -2.16
RFC4-211ENST00000460408 SLC37A4O43826 429 aa1.58□□□□□ -2.16
RFC4-211ENST00000460408 KLHL2O95198 593 aa1.58□□□□□ -2.16
RFC4-211ENST00000460408 IVLP07476 585 aa1.58□□□□□ -2.16
RFC4-211ENST00000460408 LGALS3P17931 250 aaKnown RBP1.58□□□□□ -2.16
RFC4-211ENST00000460408 IMPA1P29218 277 aa1.58□□□□□ -2.16
RFC4-211ENST00000460408 NUP62P37198 522 aaPredicted RBP1.58□□□□□ -2.16
RFC4-211ENST00000460408 ACOT2P49753 483 aa1.58□□□□□ -2.16
RFC4-211ENST00000460408 FMODQ06828 376 aa1.58□□□□□ -2.16
RFC4-211ENST00000460408 C2orf80Q0P641 193 aa1.58□□□□□ -2.16
RFC4-211ENST00000460408 C18orf21Q32NC0 220 aaPredicted RBP1.58□□□□□ -2.16
RFC4-211ENST00000460408 ATP6AP1LQ52LC2 224 aa1.58□□□□□ -2.16
RFC4-211ENST00000460408 UGT2A3Q6UWM9 527 aa1.58□□□□□ -2.16
RFC4-211ENST00000460408 TPGS1Q6ZTW0 290 aa1.58□□□□□ -2.16
RFC4-211ENST00000460408 OTUD6BQ8N6M0 293 aa1.58□□□□□ -2.16
RFC4-211ENST00000460408 C3orf56Q8N813 242 aa1.58□□□□□ -2.16
RFC4-211ENST00000460408 WFDC11Q8NEX6 87 aa1.58□□□□□ -2.16
RFC4-211ENST00000460408 OR2K2Q8NGT1 345 aa1.58□□□□□ -2.16
RFC4-211ENST00000460408 DOK4Q8TEW6 326 aa1.58□□□□□ -2.16
RFC4-211ENST00000460408 CCL17Q92583 94 aa1.58□□□□□ -2.16
RFC4-211ENST00000460408 FXYD5Q96DB9 178 aa1.58□□□□□ -2.16
RFC4-211ENST00000460408 LRRC39Q96DD0 335 aa1.58□□□□□ -2.16
RFC4-211ENST00000460408 OR2V2Q96R30 315 aa1.58□□□□□ -2.16
RFC4-211ENST00000460408 HINT2Q9BX68 163 aa1.58□□□□□ -2.16
RFC4-211ENST00000460408 BEX2Q9BXY8 128 aa1.58□□□□□ -2.16
RFC4-211ENST00000460408 SRRQ9GZT4 340 aa1.58□□□□□ -2.16
RFC4-211ENST00000460408 NXF2Q9GZY0 626 aaKnown RBP1.58□□□□□ -2.16
RFC4-211ENST00000460408 RAB1BQ9H0U4 201 aa1.58□□□□□ -2.16
RFC4-211ENST00000460408 VCX3AQ9NNX9 186 aa1.58□□□□□ -2.16
RFC4-211ENST00000460408 MRPL40Q9NQ50 206 aaKnown RBP1.58□□□□□ -2.16
RFC4-211ENST00000460408 ASF1BQ9NVP2 202 aa1.58□□□□□ -2.16
RFC4-211ENST00000460408 NLE1Q9NVX2 485 aaPredicted RBP1.58□□□□□ -2.16
RFC4-211ENST00000460408 RYR3Q15413 4870 aa1.58□□□□□ -2.16
RFC4-211ENST00000460408 KIAA1549LQ6ZVL6 1849 aa1.58□□□□□ -2.16
RFC4-211ENST00000460408 RP1P56715 2156 aa1.58□□□□□ -2.16
RFC4-211ENST00000460408 INTS1Q8N201 2190 aaKnown RBP1.58□□□□□ -2.16
RFC4-211ENST00000460408 PCLOQ9Y6V0 5065 aa1.58□□□□□ -2.16
RFC4-211ENST00000460408 BIRC6Q9NR09 4857 aa1.57□□□□□ -2.16
RFC4-211ENST00000460408 PRKDCP78527 4128 aaKnown RBP1.57□□□□□ -2.16
RFC4-211ENST00000460408 NUMA1Q14980 2115 aa1.57□□□□□ -2.16
RFC4-211ENST00000460408 IGHV3-43A0A0B4J1X8 118 aa1.57□□□□□ -2.16
RFC4-211ENST00000460408 H3BQ85 93 aa1.57□□□□□ -2.16
RFC4-211ENST00000460408 UPK2O00526 184 aa1.57□□□□□ -2.16
RFC4-211ENST00000460408 ZW10O43264 779 aa1.57□□□□□ -2.16
RFC4-211ENST00000460408 COX7A2P2O60397 106 aa1.57□□□□□ -2.16
RFC4-211ENST00000460408 ENTPD6O75354 484 aa1.57□□□□□ -2.16
RFC4-211ENST00000460408 IGLV6-57P01721 117 aa1.57□□□□□ -2.16
RFC4-211ENST00000460408 CDK1P06493 297 aa1.57□□□□□ -2.16
RFC4-211ENST00000460408 M6PRP20645 277 aa1.57□□□□□ -2.16
RFC4-211ENST00000460408 DNASE1L1P49184 302 aa1.57□□□□□ -2.16
RFC4-211ENST00000460408 NUDT2P50583 147 aa1.57□□□□□ -2.16
RFC4-211ENST00000460408 BIKQ13323 160 aa1.57□□□□□ -2.16
RFC4-211ENST00000460408 ENDOGQ14249 297 aaKnown RBP1.57□□□□□ -2.16
RFC4-211ENST00000460408 SLC9A3R2Q15599 337 aa1.57□□□□□ -2.16
RFC4-211ENST00000460408 TMEM241Q24JQ0 296 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms