RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 MOB4Q9Y3A3 225 aa17.4■□□□□ 0.38
SSNA1-202ENST00000459860 PKD1L1Q8TDX9 2849 aa17.4■□□□□ 0.38
SSNA1-202ENST00000459860 IGHV3-72A0A0B4J1Y9 119 aa17.39■□□□□ 0.37
SSNA1-202ENST00000459860 RAB29O14966 203 aa17.39■□□□□ 0.37
SSNA1-202ENST00000459860 NOL3O60936 208 aaKnown RBP17.39■□□□□ 0.37
SSNA1-202ENST00000459860 GSTT2P0CG29 244 aa17.39■□□□□ 0.37
SSNA1-202ENST00000459860 GSTT2BP0CG30 244 aa17.39■□□□□ 0.37
SSNA1-202ENST00000459860 CD1BP29016 333 aa17.39■□□□□ 0.37
SSNA1-202ENST00000459860 RPL5P46777 297 aaKnown RBP17.39■□□□□ 0.37
SSNA1-202ENST00000459860 FAM71F2Q6NXP2 309 aa17.39■□□□□ 0.37
SSNA1-202ENST00000459860 Q6ZS49 121 aa17.39■□□□□ 0.37
SSNA1-202ENST00000459860 CLVS1Q8IUQ0 354 aaPredicted RBP17.39■□□□□ 0.37
SSNA1-202ENST00000459860 OR2T10Q8NGZ9 312 aa17.39■□□□□ 0.37
SSNA1-202ENST00000459860 GINS4Q9BRT9 223 aa17.39■□□□□ 0.37
SSNA1-202ENST00000459860 CABLES2Q9BTV7 478 aa17.39■□□□□ 0.37
SSNA1-202ENST00000459860 IFI27L2Q9H2X8 130 aa17.39■□□□□ 0.37
SSNA1-202ENST00000459860 ZNF702PQ9H963 129 aa17.39■□□□□ 0.37
SSNA1-202ENST00000459860 SAA2-SAA4A0A096LPE2 208 aa17.38■□□□□ 0.37
SSNA1-202ENST00000459860 IGKV1-6A0A0C4DH72 117 aa17.38■□□□□ 0.37
SSNA1-202ENST00000459860 PEX14O75381 377 aa17.38■□□□□ 0.37
SSNA1-202ENST00000459860 SAA2P0DJI9 122 aaPredicted RBP17.38■□□□□ 0.37
SSNA1-202ENST00000459860 PROK1P58294 105 aa17.38■□□□□ 0.37
SSNA1-202ENST00000459860 ST6GALNAC5Q9BVH7 336 aa17.38■□□□□ 0.37
SSNA1-202ENST00000459860 RDH8Q9NYR8 311 aa17.38■□□□□ 0.37
SSNA1-202ENST00000459860 COMMD3Q9UBI1 195 aa17.38■□□□□ 0.37
SSNA1-202ENST00000459860 SCOCQ9UIL1 159 aa17.38■□□□□ 0.37
SSNA1-202ENST00000459860 HNF4GQ14541 408 aa17.37■□□□□ 0.37
SSNA1-202ENST00000459860 HERPUD1Q15011 391 aa17.37■□□□□ 0.37
SSNA1-202ENST00000459860 IGSF11Q5DX21 431 aa17.37■□□□□ 0.37
SSNA1-202ENST00000459860 MZT2AQ6P582 158 aa17.37■□□□□ 0.37
SSNA1-202ENST00000459860 ZNF833PQ6ZTB9 187 aa17.37■□□□□ 0.37
SSNA1-202ENST00000459860 ODF3L1Q8IXM7 274 aa17.37■□□□□ 0.37
SSNA1-202ENST00000459860 RAB2BQ8WUD1 216 aa17.37■□□□□ 0.37
SSNA1-202ENST00000459860 PARP12Q9H0J9 701 aaKnown RBP17.37■□□□□ 0.37
SSNA1-202ENST00000459860 C11orf54Q9H0W9 315 aaPredicted RBP17.37■□□□□ 0.37
SSNA1-202ENST00000459860 ZNF221Q9UK13 617 aa17.37■□□□□ 0.37
SSNA1-202ENST00000459860 SIGLEC9Q9Y336 463 aa17.37■□□□□ 0.37
SSNA1-202ENST00000459860 TRBV6-7A0A0A0MS04 114 aa17.36■□□□□ 0.37
SSNA1-202ENST00000459860 XRCC3O43542 346 aa17.36■□□□□ 0.37
SSNA1-202ENST00000459860 MOSP00540 346 aa17.36■□□□□ 0.37
SSNA1-202ENST00000459860 GPR12P47775 334 aa17.36■□□□□ 0.37
SSNA1-202ENST00000459860 OR3A3P47888 321 aa17.36■□□□□ 0.37
SSNA1-202ENST00000459860 BLCAPP62952 87 aa17.36■□□□□ 0.37
SSNA1-202ENST00000459860 LSAMPQ13449 338 aa17.36■□□□□ 0.37
SSNA1-202ENST00000459860 EBI3Q14213 229 aa17.36■□□□□ 0.37
SSNA1-202ENST00000459860 TMEM69Q5SWH9 247 aa17.36■□□□□ 0.37
SSNA1-202ENST00000459860 Q8N2B8 174 aa17.36■□□□□ 0.37
SSNA1-202ENST00000459860 EAF1Q96JC9 268 aaPredicted RBP17.36■□□□□ 0.37
SSNA1-202ENST00000459860 CMTM3Q96MX0 182 aa17.36■□□□□ 0.37
SSNA1-202ENST00000459860 BCL7BQ9BQE9 202 aa17.36■□□□□ 0.37
SSNA1-202ENST00000459860 MRPL20Q9BYC9 149 aaKnown RBP17.36■□□□□ 0.37
SSNA1-202ENST00000459860 AUNIPQ9H7T9 357 aa17.36■□□□□ 0.37
SSNA1-202ENST00000459860 FGF16O43320 207 aa17.35■□□□□ 0.37
SSNA1-202ENST00000459860 CTXN2P0C2S0 81 aa17.35■□□□□ 0.37
SSNA1-202ENST00000459860 SOX6P35712 828 aa17.35■□□□□ 0.37
SSNA1-202ENST00000459860 VDAC2P45880 294 aaPredicted RBP17.35■□□□□ 0.37
SSNA1-202ENST00000459860 ABCA11PQ4W5N1 156 aa17.35■□□□□ 0.37
SSNA1-202ENST00000459860 FBLN7Q53RD9 439 aa17.35■□□□□ 0.37
SSNA1-202ENST00000459860 ABHD14BQ96IU4 210 aa17.35■□□□□ 0.37
SSNA1-202ENST00000459860 TOLLIPQ9H0E2 274 aa17.35■□□□□ 0.37
SSNA1-202ENST00000459860 RBM7Q9Y580 266 aaKnown RBP17.35■□□□□ 0.37
SSNA1-202ENST00000459860 CMYA5Q8N3K9 4069 aa17.34■□□□□ 0.37
SSNA1-202ENST00000459860 SMIM31A0A1B0GVY4 71 aa17.34■□□□□ 0.37
SSNA1-202ENST00000459860 SSX5O60225 188 aa17.34■□□□□ 0.37
SSNA1-202ENST00000459860 APOA1P02647 267 aa17.34■□□□□ 0.37
SSNA1-202ENST00000459860 ZNF182P17025 639 aaPredicted RBP17.34■□□□□ 0.37
SSNA1-202ENST00000459860 CBX5P45973 191 aa17.34■□□□□ 0.37
SSNA1-202ENST00000459860 TMBIM6P55061 237 aa17.34■□□□□ 0.37
SSNA1-202ENST00000459860 C9orf152Q5JTZ5 239 aa17.34■□□□□ 0.37
SSNA1-202ENST00000459860 KLHDC1Q8N7A1 406 aa17.34■□□□□ 0.37
SSNA1-202ENST00000459860 NABP2Q9BQ15 211 aa17.34■□□□□ 0.37
SSNA1-202ENST00000459860 AGMATQ9BSE5 352 aa17.34■□□□□ 0.37
SSNA1-202ENST00000459860 NCBP2LA6PVI3 153 aaKnown RBP17.33■□□□□ 0.36
SSNA1-202ENST00000459860 VSIG10L2P0DP72 767 aa17.33■□□□□ 0.36
SSNA1-202ENST00000459860 TAS2R20P59543 309 aa17.33■□□□□ 0.36
SSNA1-202ENST00000459860 ARPC4P59998 168 aa17.33■□□□□ 0.36
SSNA1-202ENST00000459860 RPL39P5Q59GN2 51 aa17.33■□□□□ 0.36
SSNA1-202ENST00000459860 CNIH2Q6PI25 160 aa17.33■□□□□ 0.36
SSNA1-202ENST00000459860 OR8H1Q8NGG4 311 aa17.33■□□□□ 0.36
SSNA1-202ENST00000459860 ANXA10Q9UJ72 324 aa17.33■□□□□ 0.36
SSNA1-202ENST00000459860 RNF150Q9ULK6 438 aa17.33■□□□□ 0.36
SSNA1-202ENST00000459860 IGKV1D-8A0A087WSZ0 117 aa17.32■□□□□ 0.36
SSNA1-202ENST00000459860 ZNF736B4DX44 427 aaPredicted RBP17.32■□□□□ 0.36
SSNA1-202ENST00000459860 EIF4EP06730 217 aaKnown RBP17.32■□□□□ 0.36
SSNA1-202ENST00000459860 Q8N6K4 173 aa17.32■□□□□ 0.36
SSNA1-202ENST00000459860 C5orf56Q8N8D9 126 aa17.32■□□□□ 0.36
SSNA1-202ENST00000459860 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.32■□□□□ 0.36
SSNA1-202ENST00000459860 BEST4Q8NFU0 473 aa17.32■□□□□ 0.36
SSNA1-202ENST00000459860 CITED1Q99966 193 aa17.32■□□□□ 0.36
SSNA1-202ENST00000459860 OR2D2Q9H210 308 aa17.32■□□□□ 0.36
SSNA1-202ENST00000459860 IFT46Q9NQC8 304 aa17.32■□□□□ 0.36
SSNA1-202ENST00000459860 OR5H14A6NHG9 310 aa17.31■□□□□ 0.36
SSNA1-202ENST00000459860 OR8U9P0C7N5 309 aa17.31■□□□□ 0.36
SSNA1-202ENST00000459860 HOGA1Q86XE5 327 aa17.31■□□□□ 0.36
SSNA1-202ENST00000459860 H1FOOQ8IZA3 346 aaPredicted RBP17.31■□□□□ 0.36
SSNA1-202ENST00000459860 OR8U1Q8NH10 309 aa17.31■□□□□ 0.36
SSNA1-202ENST00000459860 ZNF251Q9BRH9 671 aa17.31■□□□□ 0.36
SSNA1-202ENST00000459860 SERTAD4Q9NUC0 356 aa17.31■□□□□ 0.36
SSNA1-202ENST00000459860 FAM25AB3EWG3 89 aa17.3■□□□□ 0.36
SSNA1-202ENST00000459860 FAM25CB3EWG5 89 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms