RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 GATA3P23771 443 aa4.83□□□□□ -1.64
RNU1-88P-201ENST00000459274 RAB13P51153 203 aa4.83□□□□□ -1.64
RNU1-88P-201ENST00000459274 VAMP2P63027 116 aa4.83□□□□□ -1.64
RNU1-88P-201ENST00000459274 RPP30P78346 268 aaKnown RBP4.83□□□□□ -1.64
RNU1-88P-201ENST00000459274 TMEM268Q5VZI3 342 aa4.83□□□□□ -1.64
RNU1-88P-201ENST00000459274 ZNF818PQ6ZRF7 136 aa4.83□□□□□ -1.64
RNU1-88P-201ENST00000459274 H2BFWTQ7Z2G1 175 aa4.83□□□□□ -1.64
RNU1-88P-201ENST00000459274 FAM219AQ8IW50 185 aa4.83□□□□□ -1.64
RNU1-88P-201ENST00000459274 ADAD2Q8NCV1 583 aaKnown RBP4.83□□□□□ -1.64
RNU1-88P-201ENST00000459274 OR4S2Q8NH73 311 aa4.83□□□□□ -1.64
RNU1-88P-201ENST00000459274 OR1S1Q8NH92 325 aa4.83□□□□□ -1.64
RNU1-88P-201ENST00000459274 UBALD1Q8TB05 177 aa4.83□□□□□ -1.64
RNU1-88P-201ENST00000459274 CHAC2Q8WUX2 184 aa4.83□□□□□ -1.64
RNU1-88P-201ENST00000459274 CAPSLQ8WWF8 208 aa4.83□□□□□ -1.64
RNU1-88P-201ENST00000459274 RBPMSQ93062 196 aaKnown RBP4.83□□□□□ -1.64
RNU1-88P-201ENST00000459274 IL22RA2Q969J5 263 aa4.83□□□□□ -1.64
RNU1-88P-201ENST00000459274 RPEQ96AT9 228 aa4.83□□□□□ -1.64
RNU1-88P-201ENST00000459274 GALNT14Q96FL9 552 aa4.83□□□□□ -1.64
RNU1-88P-201ENST00000459274 RTBDNQ9BSG5 229 aaPredicted RBP4.83□□□□□ -1.64
RNU1-88P-201ENST00000459274 BPESC1Q9GZL8 116 aa4.83□□□□□ -1.64
RNU1-88P-201ENST00000459274 TMEM222Q9H0R3 208 aa4.83□□□□□ -1.64
RNU1-88P-201ENST00000459274 TMEM133Q9H2Q1 129 aa4.83□□□□□ -1.64
RNU1-88P-201ENST00000459274 C5orf66Q9H5L9 145 aa4.83□□□□□ -1.64
RNU1-88P-201ENST00000459274 ENY2Q9NPA8 101 aa4.83□□□□□ -1.64
RNU1-88P-201ENST00000459274 C19orf12Q9NSK7 152 aa4.83□□□□□ -1.64
RNU1-88P-201ENST00000459274 FAM212BQ9NTI7 297 aaPredicted RBP4.83□□□□□ -1.64
RNU1-88P-201ENST00000459274 OR1A1Q9P1Q5 309 aa4.83□□□□□ -1.64
RNU1-88P-201ENST00000459274 GAB2Q9UQC2 676 aa4.83□□□□□ -1.64
RNU1-88P-201ENST00000459274 KPTNQ9Y664 436 aa4.83□□□□□ -1.64
RNU1-88P-201ENST00000459274 ANKHD1Q8IWZ3 2542 aaKnown RBP4.83□□□□□ -1.64
RNU1-88P-201ENST00000459274 MEX3AA1L020 520 aaKnown RBP4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 C17orf98A8MV24 154 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 LEUTXA8MZ59 168 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 C15orf65H3BRN8 121 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 J3QR06 171 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 WIPF1O43516 503 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 ACTL6BO94805 426 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 SCAF4O95104 1147 aaKnown RBP4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 CDS2O95674 445 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 SCGB1D2O95969 90 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 HPRT1P00492 218 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 IGHV4-39P01824 125 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 ARG1P05089 322 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 IGHV1-8P0DP01 117 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 SELLP14151 372 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 VDAC1P21796 283 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 HTR1DP28221 377 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 BRS3P32247 399 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 LPAR6P43657 344 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 S100A10P60903 97 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 ARF6P62330 175 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 LCN2P80188 198 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 HERPUD1Q15011 391 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 IAH1Q2TAA2 248 aaPredicted RBP4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 DEFB113Q30KQ7 82 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 PRAMEF5Q5TYX0 476 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 DCAF12L2Q5VW00 463 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 ZNF660Q6AZW8 331 aaPredicted RBP4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 DHRS7BQ6IAN0 325 aaPredicted RBP4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 FAM71F2Q6NXP2 309 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 LIAT1Q6ZQX7 453 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 TGIF2LYQ8IUE0 185 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 TGIF2LXQ8IUE1 241 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 SPAG16Q8N0X2 631 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 DRAM1Q8N682 238 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 KIR3DL3Q8N743 410 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 C8orf31Q8N9H6 132 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 OR52B4Q8NGK2 314 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 OR2T35Q8NGX2 323 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 OR4A16Q8NH70 328 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 VSTM2AQ8TAG5 236 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 C8orf46Q8TAG6 207 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 C10orf105Q8TEF2 133 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 ABHD14BQ96IU4 210 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 C2orf50Q96LR7 162 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 NMES1Q9C002 83 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 TOLLIPQ9H0E2 274 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 FXYD6Q9H0Q3 95 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 DCAF16Q9NXF7 216 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 FKBP11Q9NYL4 201 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 FAM96BQ9Y3D0 163 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 INSIG2Q9Y5U4 225 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 DCHS1Q96JQ0 3298 aa4.82□□□□□ -1.64
RNU1-88P-201ENST00000459274 DMXL2Q8TDJ6 3036 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 TRAV20A0A0B4J274 112 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 IGKV1-6A0A0C4DH72 117 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 A0A1B0GU03 582 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 TNFRSF13BO14836 293 aaPredicted RBP4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 SHOXO15266 292 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 ST8SIA3O43173 380 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 GPR137BO60478 399 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 FCGR3BO75015 233 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 NDUFS7O75251 213 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 IGHV3-7P01780 117 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 IGHV2-5P01817 119 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 C1QBP02746 253 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 SULT1A3P0DMM9 295 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 SULT1A4P0DMN0 295 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 VSIG10L2P0DP72 767 aa4.81□□□□□ -1.64
RNU1-88P-201ENST00000459274 PAX1P15863 534 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms