RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 TMEM187Q14656 261 aa11.57□□□□□ -0.56
SF3B4-202ENST00000457312 ZSCAN26Q16670 478 aa11.57□□□□□ -0.56
SF3B4-202ENST00000457312 C12orf74Q32Q52 190 aa11.57□□□□□ -0.56
SF3B4-202ENST00000457312 APRG1Q8IVJ8 170 aa11.57□□□□□ -0.56
SF3B4-202ENST00000457312 CENPSQ8N2Z9 138 aa11.57□□□□□ -0.56
SF3B4-202ENST00000457312 PRR18Q8N4B5 295 aa11.57□□□□□ -0.56
SF3B4-202ENST00000457312 MRPS24Q96EL2 167 aaKnown RBP11.57□□□□□ -0.56
SF3B4-202ENST00000457312 C6orf62Q9GZU0 229 aaPredicted RBP11.57□□□□□ -0.56
SF3B4-202ENST00000457312 MAGEL2Q9UJ55 1249 aa11.57□□□□□ -0.56
SF3B4-202ENST00000457312 LRP2P98164 4655 aa11.57□□□□□ -0.56
SF3B4-202ENST00000457312 KRTAP9-6A0A140TA67 174 aa11.56□□□□□ -0.56
SF3B4-202ENST00000457312 H3BNX3 289 aa11.56□□□□□ -0.56
SF3B4-202ENST00000457312 AIPO00170 330 aa11.56□□□□□ -0.56
SF3B4-202ENST00000457312 SPDEFO95238 335 aa11.56□□□□□ -0.56
SF3B4-202ENST00000457312 CA1P00915 261 aaPredicted RBP11.56□□□□□ -0.56
SF3B4-202ENST00000457312 APELAP0DMC3 54 aa11.56□□□□□ -0.56
SF3B4-202ENST00000457312 TMEM225BP0DP42 221 aa11.56□□□□□ -0.56
SF3B4-202ENST00000457312 HMGA2P52926 109 aa11.56□□□□□ -0.56
SF3B4-202ENST00000457312 ATP5G2Q06055 141 aa11.56□□□□□ -0.56
SF3B4-202ENST00000457312 OR10AC1Q8NH08 325 aa11.56□□□□□ -0.56
SF3B4-202ENST00000457312 TSPAN4O14817 238 aa11.55□□□□□ -0.56
SF3B4-202ENST00000457312 CCNB2O95067 398 aa11.55□□□□□ -0.56
SF3B4-202ENST00000457312 PRH1P02810 166 aa11.55□□□□□ -0.56
SF3B4-202ENST00000457312 SMR3BP02814 79 aaPredicted RBP11.55□□□□□ -0.56
SF3B4-202ENST00000457312 MT-ND2P03891 347 aa11.55□□□□□ -0.56
SF3B4-202ENST00000457312 MT-ND4P03905 459 aa11.55□□□□□ -0.56
SF3B4-202ENST00000457312 FABP3P05413 133 aa11.55□□□□□ -0.56
SF3B4-202ENST00000457312 C8orf88P0DMB2 117 aa11.55□□□□□ -0.56
SF3B4-202ENST00000457312 CT45A6P0DMU7 189 aa11.55□□□□□ -0.56
SF3B4-202ENST00000457312 CT45A5P0DMU8 189 aa11.55□□□□□ -0.56
SF3B4-202ENST00000457312 CT45A7P0DMV0 189 aa11.55□□□□□ -0.56
SF3B4-202ENST00000457312 PPP1CCP36873 323 aaKnown RBP11.55□□□□□ -0.56
SF3B4-202ENST00000457312 PJVKQ0ZLH3 352 aa11.55□□□□□ -0.56
SF3B4-202ENST00000457312 RIPK1Q13546 671 aa11.55□□□□□ -0.56
SF3B4-202ENST00000457312 FAM71F2Q6NXP2 309 aa11.55□□□□□ -0.56
SF3B4-202ENST00000457312 ZNF497Q6ZNH5 498 aa11.55□□□□□ -0.56
SF3B4-202ENST00000457312 RNF5Q99942 180 aa11.55□□□□□ -0.56
SF3B4-202ENST00000457312 KCTD14Q9BQ13 255 aaPredicted RBP11.55□□□□□ -0.56
SF3B4-202ENST00000457312 SULT4A1Q9BR01 284 aa11.55□□□□□ -0.56
SF3B4-202ENST00000457312 ADI1Q9BV57 179 aa11.55□□□□□ -0.56
SF3B4-202ENST00000457312 ALG8Q9BVK2 526 aa11.55□□□□□ -0.56
SF3B4-202ENST00000457312 OR2S2Q9NQN1 319 aa11.55□□□□□ -0.56
SF3B4-202ENST00000457312 ING4Q9UNL4 249 aa11.55□□□□□ -0.56
SF3B4-202ENST00000457312 WASHC3Q9Y3C0 194 aa11.55□□□□□ -0.56
SF3B4-202ENST00000457312 TRBV9A0A0B4J1U6 114 aa11.54□□□□□ -0.56
SF3B4-202ENST00000457312 NBDYA0A0U1RRE5 68 aa11.54□□□□□ -0.56
SF3B4-202ENST00000457312 ZNF320A2RRD8 509 aa11.54□□□□□ -0.56
SF3B4-202ENST00000457312 H7C2Y5 167 aa11.54□□□□□ -0.56
SF3B4-202ENST00000457312 OCM2P0CE71 109 aa11.54□□□□□ -0.56
SF3B4-202ENST00000457312 OCMP0CE72 109 aaPredicted RBP11.54□□□□□ -0.56
SF3B4-202ENST00000457312 ACTR3P61158 418 aa11.54□□□□□ -0.56
SF3B4-202ENST00000457312 SETD9Q8NE22 299 aa11.54□□□□□ -0.56
SF3B4-202ENST00000457312 OR13C9Q8NGT0 318 aa11.54□□□□□ -0.56
SF3B4-202ENST00000457312 ASB9Q96DX5 294 aa11.54□□□□□ -0.56
SF3B4-202ENST00000457312 PYURFQ96I23 114 aa11.54□□□□□ -0.56
SF3B4-202ENST00000457312 IFI27L2Q9H2X8 130 aa11.54□□□□□ -0.56
SF3B4-202ENST00000457312 C5orf66Q9H5L9 145 aa11.54□□□□□ -0.56
SF3B4-202ENST00000457312 IFT22Q9H7X7 185 aa11.54□□□□□ -0.56
SF3B4-202ENST00000457312 RAB9BQ9NP90 201 aa11.54□□□□□ -0.56
SF3B4-202ENST00000457312 TNFRSF11BO00300 401 aa11.53□□□□□ -0.56
SF3B4-202ENST00000457312 GMNNO75496 209 aa11.53□□□□□ -0.56
SF3B4-202ENST00000457312 KRT36O76013 467 aa11.53□□□□□ -0.56
SF3B4-202ENST00000457312 T-ENOLP0DO92 83 aa11.53□□□□□ -0.56
SF3B4-202ENST00000457312 ZNF20P17024 532 aa11.53□□□□□ -0.56
SF3B4-202ENST00000457312 GLYATQ6IB77 296 aa11.53□□□□□ -0.56
SF3B4-202ENST00000457312 OR4A47Q6IF82 309 aa11.53□□□□□ -0.56
SF3B4-202ENST00000457312 SERPINA12Q8IW75 414 aa11.53□□□□□ -0.56
SF3B4-202ENST00000457312 OR52L2PQ8NGH6 319 aa11.53□□□□□ -0.56
SF3B4-202ENST00000457312 FGGYQ96C11 551 aa11.53□□□□□ -0.56
SF3B4-202ENST00000457312 CNN2Q99439 309 aaKnown RBP11.53□□□□□ -0.56
SF3B4-202ENST00000457312 ADGRL4Q9HBW9 690 aa11.53□□□□□ -0.56
SF3B4-202ENST00000457312 ENOPH1Q9UHY7 261 aa11.53□□□□□ -0.56
SF3B4-202ENST00000457312 FAM90A7PA6NKC0 464 aa11.52□□□□□ -0.57
SF3B4-202ENST00000457312 H3BN98 237 aa11.52□□□□□ -0.57
SF3B4-202ENST00000457312 SNX3O60493 162 aa11.52□□□□□ -0.57
SF3B4-202ENST00000457312 OR7C1O76099 320 aaPredicted RBP11.52□□□□□ -0.57
SF3B4-202ENST00000457312 OR9G9P0C7N8 305 aa11.52□□□□□ -0.57
SF3B4-202ENST00000457312 MIFP14174 115 aa11.52□□□□□ -0.57
SF3B4-202ENST00000457312 MED21Q13503 144 aa11.52□□□□□ -0.57
SF3B4-202ENST00000457312 MAPRE2Q15555 327 aa11.52□□□□□ -0.57
SF3B4-202ENST00000457312 ZNF585BQ52M93 769 aa11.52□□□□□ -0.57
SF3B4-202ENST00000457312 RPL39P5Q59GN2 51 aa11.52□□□□□ -0.57
SF3B4-202ENST00000457312 FAM209BQ5JX69 171 aa11.52□□□□□ -0.57
SF3B4-202ENST00000457312 C6orf141Q5SZD1 244 aa11.52□□□□□ -0.57
SF3B4-202ENST00000457312 SYT6Q5T7P8 510 aaPredicted RBP11.52□□□□□ -0.57
SF3B4-202ENST00000457312 PRSS35Q8N3Z0 413 aa11.52□□□□□ -0.57
SF3B4-202ENST00000457312 OR5AN1Q8NGI8 311 aa11.52□□□□□ -0.57
SF3B4-202ENST00000457312 OR10K1Q8NGX5 313 aa11.52□□□□□ -0.57
SF3B4-202ENST00000457312 MARC2Q969Z3 335 aa11.52□□□□□ -0.57
SF3B4-202ENST00000457312 MCUR1Q96AQ8 359 aa11.52□□□□□ -0.57
SF3B4-202ENST00000457312 TSNAXQ99598 290 aaKnown RBP11.52□□□□□ -0.57
SF3B4-202ENST00000457312 RNF167Q9H6Y7 350 aa11.52□□□□□ -0.57
SF3B4-202ENST00000457312 IGKV1-16P04430 117 aa11.51□□□□□ -0.57
SF3B4-202ENST00000457312 UBCP0CG48 685 aaKnown RBP11.51□□□□□ -0.57
SF3B4-202ENST00000457312 EPHA2P29317 976 aa11.51□□□□□ -0.57
SF3B4-202ENST00000457312 MC5RP33032 325 aa11.51□□□□□ -0.57
SF3B4-202ENST00000457312 MAGOHP61326 146 aaKnown RBP11.51□□□□□ -0.57
SF3B4-202ENST00000457312 PPP1R8Q12972 351 aaKnown RBP11.51□□□□□ -0.57
SF3B4-202ENST00000457312 C15orf32Q32M92 178 aa11.51□□□□□ -0.57
SF3B4-202ENST00000457312 C6orf183Q5T699 404 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms