RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 OR10J5Q8NHC4 309 aa14.36□□□□□ -0.11
PDLIM2-215ENST00000456545 ABHD14BQ96IU4 210 aa14.36□□□□□ -0.11
PDLIM2-215ENST00000456545 NABP2Q9BQ15 211 aa14.36□□□□□ -0.11
PDLIM2-215ENST00000456545 MRPL20Q9BYC9 149 aaKnown RBP14.36□□□□□ -0.11
PDLIM2-215ENST00000456545 C11orf54Q9H0W9 315 aaPredicted RBP14.36□□□□□ -0.11
PDLIM2-215ENST00000456545 RNF150Q9ULK6 438 aa14.36□□□□□ -0.11
PDLIM2-215ENST00000456545 TCRBV4S1A1TA0A5B7 111 aa14.35□□□□□ -0.11
PDLIM2-215ENST00000456545 ITGB1BP1O14713 200 aa14.35□□□□□ -0.11
PDLIM2-215ENST00000456545 NDUFA11Q86Y39 141 aa14.35□□□□□ -0.11
PDLIM2-215ENST00000456545 CROCCP3Q8IVE0 287 aa14.35□□□□□ -0.11
PDLIM2-215ENST00000456545 MAFIPQ8WZ33 124 aa14.35□□□□□ -0.11
PDLIM2-215ENST00000456545 CITED2Q99967 270 aaPredicted RBP14.35□□□□□ -0.11
PDLIM2-215ENST00000456545 ZNF251Q9BRH9 671 aa14.35□□□□□ -0.11
PDLIM2-215ENST00000456545 IFI27L2Q9H2X8 130 aa14.35□□□□□ -0.11
PDLIM2-215ENST00000456545 LIN7CQ9NUP9 197 aaKnown RBP14.35□□□□□ -0.11
PDLIM2-215ENST00000456545 RHBDL2Q9NX52 303 aa14.35□□□□□ -0.11
PDLIM2-215ENST00000456545 ZNF230Q9UIE0 474 aaPredicted RBP14.35□□□□□ -0.11
PDLIM2-215ENST00000456545 RBM7Q9Y580 266 aaKnown RBP14.35□□□□□ -0.11
PDLIM2-215ENST00000456545 ETV7Q9Y603 341 aa14.35□□□□□ -0.11
PDLIM2-215ENST00000456545 PSMB11A5LHX3 300 aa14.34□□□□□ -0.11
PDLIM2-215ENST00000456545 OPN1MWP04001 364 aa14.34□□□□□ -0.11
PDLIM2-215ENST00000456545 GSTT2P0CG29 244 aa14.34□□□□□ -0.11
PDLIM2-215ENST00000456545 GSTT2BP0CG30 244 aa14.34□□□□□ -0.11
PDLIM2-215ENST00000456545 OPN1MW2P0DN77 364 aa14.34□□□□□ -0.11
PDLIM2-215ENST00000456545 OPN1MW3P0DN78 364 aa14.34□□□□□ -0.11
PDLIM2-215ENST00000456545 GPR12P47775 334 aa14.34□□□□□ -0.11
PDLIM2-215ENST00000456545 SCAND1P57086 179 aa14.34□□□□□ -0.11
PDLIM2-215ENST00000456545 GNG2P59768 71 aa14.34□□□□□ -0.11
PDLIM2-215ENST00000456545 SLC35B1P78383 322 aa14.34□□□□□ -0.11
PDLIM2-215ENST00000456545 PITPNAQ00169 270 aa14.34□□□□□ -0.11
PDLIM2-215ENST00000456545 MMDQ15546 238 aa14.34□□□□□ -0.11
PDLIM2-215ENST00000456545 RPL39P5Q59GN2 51 aa14.34□□□□□ -0.11
PDLIM2-215ENST00000456545 KHDC1LQ5JSQ8 128 aa14.34□□□□□ -0.11
PDLIM2-215ENST00000456545 FAM71F2Q6NXP2 309 aa14.34□□□□□ -0.11
PDLIM2-215ENST00000456545 Q8N6K4 173 aa14.34□□□□□ -0.11
PDLIM2-215ENST00000456545 CHPT1Q8WUD6 406 aa14.34□□□□□ -0.11
PDLIM2-215ENST00000456545 YIPF6Q96EC8 236 aa14.34□□□□□ -0.11
PDLIM2-215ENST00000456545 GINS4Q9BRT9 223 aa14.34□□□□□ -0.11
PDLIM2-215ENST00000456545 ST6GALNAC5Q9BVH7 336 aa14.34□□□□□ -0.11
PDLIM2-215ENST00000456545 PARP12Q9H0J9 701 aaKnown RBP14.34□□□□□ -0.11
PDLIM2-215ENST00000456545 RDH8Q9NYR8 311 aa14.34□□□□□ -0.11
PDLIM2-215ENST00000456545 A0A1W2PRX2 142 aa14.33□□□□□ -0.12
PDLIM2-215ENST00000456545 H7C2Y5 167 aa14.33□□□□□ -0.12
PDLIM2-215ENST00000456545 GSTP1P09211 210 aaKnown RBP14.33□□□□□ -0.12
PDLIM2-215ENST00000456545 MC5RP33032 325 aa14.33□□□□□ -0.12
PDLIM2-215ENST00000456545 F2RL1P55085 397 aa14.33□□□□□ -0.12
PDLIM2-215ENST00000456545 IGSF11Q5DX21 431 aa14.33□□□□□ -0.12
PDLIM2-215ENST00000456545 HACD4Q5VWC8 232 aa14.33□□□□□ -0.12
PDLIM2-215ENST00000456545 Q8N9W7 124 aa14.33□□□□□ -0.12
PDLIM2-215ENST00000456545 OR4F17Q8NGA8 305 aa14.33□□□□□ -0.12
PDLIM2-215ENST00000456545 R3HDM4Q96D70 268 aa14.33□□□□□ -0.12
PDLIM2-215ENST00000456545 OR4F4Q96R69 305 aa14.33□□□□□ -0.12
PDLIM2-215ENST00000456545 ABCG5Q9H222 651 aa14.33□□□□□ -0.12
PDLIM2-215ENST00000456545 DIABLOQ9NR28 239 aa14.33□□□□□ -0.12
PDLIM2-215ENST00000456545 KIAA1456Q9P272 454 aa14.33□□□□□ -0.12
PDLIM2-215ENST00000456545 LINC00527Q9UJ94 153 aa14.33□□□□□ -0.12
PDLIM2-215ENST00000456545 IGKV1-6A0A0C4DH72 117 aa14.32□□□□□ -0.12
PDLIM2-215ENST00000456545 KCNAB3O43448 404 aa14.32□□□□□ -0.12
PDLIM2-215ENST00000456545 TMEM127O75204 238 aa14.32□□□□□ -0.12
PDLIM2-215ENST00000456545 IGHG2P01859 326 aa14.32□□□□□ -0.12
PDLIM2-215ENST00000456545 DTYMKP23919 212 aa14.32□□□□□ -0.12
PDLIM2-215ENST00000456545 SOX6P35712 828 aa14.32□□□□□ -0.12
PDLIM2-215ENST00000456545 ACTBP60709 375 aa14.32□□□□□ -0.12
PDLIM2-215ENST00000456545 SRSF7Q16629 238 aaKnown RBP eCLIP14.32□□□□□ -0.12
PDLIM2-215ENST00000456545 ZNF329Q86UD4 541 aa14.32□□□□□ -0.12
PDLIM2-215ENST00000456545 OR5H6Q8NGV6 325 aa14.32□□□□□ -0.12
PDLIM2-215ENST00000456545 WIPF2Q8TF74 440 aaPredicted RBP14.32□□□□□ -0.12
PDLIM2-215ENST00000456545 RBMXL1Q96E39 390 aaKnown RBP14.32□□□□□ -0.12
PDLIM2-215ENST00000456545 NOL4LQ96MY1 436 aaPredicted RBP14.32□□□□□ -0.12
PDLIM2-215ENST00000456545 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.32□□□□□ -0.12
PDLIM2-215ENST00000456545 PLSCR3Q9NRY6 295 aa14.32□□□□□ -0.12
PDLIM2-215ENST00000456545 ELF5Q9UKW6 265 aaPredicted RBP14.32□□□□□ -0.12
PDLIM2-215ENST00000456545 TRAV18A0A075B6X5 111 aa14.31□□□□□ -0.12
PDLIM2-215ENST00000456545 TMEM235A6NFC5 223 aa14.31□□□□□ -0.12
PDLIM2-215ENST00000456545 AP4M1O00189 453 aa14.31□□□□□ -0.12
PDLIM2-215ENST00000456545 OR8U9P0C7N5 309 aa14.31□□□□□ -0.12
PDLIM2-215ENST00000456545 TGFBR1P36897 503 aa14.31□□□□□ -0.12
PDLIM2-215ENST00000456545 CD83Q01151 205 aa14.31□□□□□ -0.12
PDLIM2-215ENST00000456545 PNLIPRP3Q17RR3 467 aa14.31□□□□□ -0.12
PDLIM2-215ENST00000456545 FAM131AQ6UXB0 335 aa14.31□□□□□ -0.12
PDLIM2-215ENST00000456545 GLDNQ6ZMI3 551 aaPredicted RBP14.31□□□□□ -0.12
PDLIM2-215ENST00000456545 OR8U1Q8NH10 309 aa14.31□□□□□ -0.12
PDLIM2-215ENST00000456545 AGMATQ9BSE5 352 aa14.31□□□□□ -0.12
PDLIM2-215ENST00000456545 GON7Q9BXV9 100 aa14.31□□□□□ -0.12
PDLIM2-215ENST00000456545 SPATA2Q9UM82 520 aa14.31□□□□□ -0.12
PDLIM2-215ENST00000456545 TSSC4Q9Y5U2 329 aaPredicted RBP14.31□□□□□ -0.12
PDLIM2-215ENST00000456545 TRBV6-7A0A0A0MS04 114 aa14.3□□□□□ -0.12
PDLIM2-215ENST00000456545 OR5H14A6NHG9 310 aa14.3□□□□□ -0.12
PDLIM2-215ENST00000456545 CT45A6P0DMU7 189 aa14.3□□□□□ -0.12
PDLIM2-215ENST00000456545 CT45A5P0DMU8 189 aa14.3□□□□□ -0.12
PDLIM2-215ENST00000456545 CT45A7P0DMV0 189 aa14.3□□□□□ -0.12
PDLIM2-215ENST00000456545 PF4V1P10720 104 aa14.3□□□□□ -0.12
PDLIM2-215ENST00000456545 RPS19P39019 145 aaKnown RBP14.3□□□□□ -0.12
PDLIM2-215ENST00000456545 PLGLAQ15195 96 aa14.3□□□□□ -0.12
PDLIM2-215ENST00000456545 ZNF260Q3ZCT1 412 aa14.3□□□□□ -0.12
PDLIM2-215ENST00000456545 C10orf99Q6UWK7 81 aa14.3□□□□□ -0.12
PDLIM2-215ENST00000456545 NUDCD2Q8WVJ2 157 aa14.3□□□□□ -0.12
PDLIM2-215ENST00000456545 CABLES2Q9BTV7 478 aa14.3□□□□□ -0.12
PDLIM2-215ENST00000456545 FUNDC2Q9BWH2 189 aa14.3□□□□□ -0.12
PDLIM2-215ENST00000456545 DCSTAMPQ9H295 470 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms