RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 CD2P06729 351 aa4.57□□□□□ -1.68
HLA-DPA3-207ENST00000454398 GZMHP20718 246 aa4.57□□□□□ -1.68
HLA-DPA3-207ENST00000454398 SSBP2P81877 361 aaPredicted RBP4.57□□□□□ -1.68
HLA-DPA3-207ENST00000454398 PJVKQ0ZLH3 352 aa4.57□□□□□ -1.68
HLA-DPA3-207ENST00000454398 DYRK1AQ13627 763 aa4.57□□□□□ -1.68
HLA-DPA3-207ENST00000454398 PMS2P11Q13670 270 aa4.57□□□□□ -1.68
HLA-DPA3-207ENST00000454398 LIN54Q6MZP7 749 aa4.57□□□□□ -1.68
HLA-DPA3-207ENST00000454398 C19orf35Q6ZS72 473 aa4.57□□□□□ -1.68
HLA-DPA3-207ENST00000454398 PPP1R27Q86WC6 154 aa4.57□□□□□ -1.68
HLA-DPA3-207ENST00000454398 OR2AK2Q8NG84 335 aa4.57□□□□□ -1.68
HLA-DPA3-207ENST00000454398 SETD6Q8TBK2 473 aa4.57□□□□□ -1.68
HLA-DPA3-207ENST00000454398 SMIM19Q96E16 107 aa4.57□□□□□ -1.68
HLA-DPA3-207ENST00000454398 MRPS24Q96EL2 167 aaKnown RBP4.57□□□□□ -1.68
HLA-DPA3-207ENST00000454398 Q96M66 194 aa4.57□□□□□ -1.68
HLA-DPA3-207ENST00000454398 S100A13Q99584 98 aa4.57□□□□□ -1.68
HLA-DPA3-207ENST00000454398 SULT4A1Q9BR01 284 aa4.57□□□□□ -1.68
HLA-DPA3-207ENST00000454398 SPATA25Q9BR10 227 aa4.57□□□□□ -1.68
HLA-DPA3-207ENST00000454398 NICN1Q9BSH3 213 aa4.57□□□□□ -1.68
HLA-DPA3-207ENST00000454398 BATF3Q9NR55 127 aa4.57□□□□□ -1.68
HLA-DPA3-207ENST00000454398 ZNF355PQ9NSJ1 428 aa4.57□□□□□ -1.68
HLA-DPA3-207ENST00000454398 C19orf73Q9NVV2 129 aa4.57□□□□□ -1.68
HLA-DPA3-207ENST00000454398 CNOT2Q9NZN8 540 aaKnown RBP4.57□□□□□ -1.68
HLA-DPA3-207ENST00000454398 METTL1Q9UBP6 276 aaKnown RBP4.57□□□□□ -1.68
HLA-DPA3-207ENST00000454398 STUB1Q9UNE7 303 aa4.57□□□□□ -1.68
HLA-DPA3-207ENST00000454398 DNAH11Q96DT5 4516 aa4.57□□□□□ -1.68
HLA-DPA3-207ENST00000454398 TRBV5-5A0A0J9YX44 114 aa4.56□□□□□ -1.68
HLA-DPA3-207ENST00000454398 SLC25A17O43808 307 aa4.56□□□□□ -1.68
HLA-DPA3-207ENST00000454398 PDCD6O75340 191 aa4.56□□□□□ -1.68
HLA-DPA3-207ENST00000454398 WBP4O75554 376 aaKnown RBP4.56□□□□□ -1.68
HLA-DPA3-207ENST00000454398 PRH1P02810 166 aa4.56□□□□□ -1.68
HLA-DPA3-207ENST00000454398 CT45A6P0DMU7 189 aa4.56□□□□□ -1.68
HLA-DPA3-207ENST00000454398 CT45A5P0DMU8 189 aa4.56□□□□□ -1.68
HLA-DPA3-207ENST00000454398 CT45A7P0DMV0 189 aa4.56□□□□□ -1.68
HLA-DPA3-207ENST00000454398 IGFBP3P17936 291 aaPredicted RBP4.56□□□□□ -1.68
HLA-DPA3-207ENST00000454398 FSTP19883 344 aa4.56□□□□□ -1.68
HLA-DPA3-207ENST00000454398 VEGFCP49767 419 aa4.56□□□□□ -1.68
HLA-DPA3-207ENST00000454398 ALDH3A2P51648 485 aa4.56□□□□□ -1.68
HLA-DPA3-207ENST00000454398 RPS11P62280 158 aaKnown RBP eCLIP4.56□□□□□ -1.68
HLA-DPA3-207ENST00000454398 SLC25A30Q5SVS4 291 aa4.56□□□□□ -1.68
HLA-DPA3-207ENST00000454398 C6orf141Q5SZD1 244 aa4.56□□□□□ -1.68
HLA-DPA3-207ENST00000454398 MEDAGQ5VYS4 303 aa4.56□□□□□ -1.68
HLA-DPA3-207ENST00000454398 IL34Q6ZMJ4 242 aa4.56□□□□□ -1.68
HLA-DPA3-207ENST00000454398 C6orf201Q7Z4U5 140 aa4.56□□□□□ -1.68
HLA-DPA3-207ENST00000454398 LINC00596Q86U02 117 aa4.56□□□□□ -1.68
HLA-DPA3-207ENST00000454398 LYPD6Q86Y78 171 aa4.56□□□□□ -1.68
HLA-DPA3-207ENST00000454398 GAPTQ8N292 157 aa4.56□□□□□ -1.68
HLA-DPA3-207ENST00000454398 SVOPQ8N4V2 548 aa4.56□□□□□ -1.68
HLA-DPA3-207ENST00000454398 NPBQ8NG41 125 aa4.56□□□□□ -1.68
HLA-DPA3-207ENST00000454398 OR5T1Q8NG75 326 aa4.56□□□□□ -1.68
HLA-DPA3-207ENST00000454398 GHSRQ92847 366 aa4.56□□□□□ -1.68
HLA-DPA3-207ENST00000454398 MRPL48Q96GC5 212 aaKnown RBP4.56□□□□□ -1.68
HLA-DPA3-207ENST00000454398 PGLYRP3Q96LB9 341 aa4.56□□□□□ -1.68
HLA-DPA3-207ENST00000454398 SLC29A1Q99808 456 aa4.56□□□□□ -1.68
HLA-DPA3-207ENST00000454398 THAP7Q9BT49 309 aaPredicted RBP4.56□□□□□ -1.68
HLA-DPA3-207ENST00000454398 CST11Q9H112 138 aa4.56□□□□□ -1.68
HLA-DPA3-207ENST00000454398 GHITMQ9H3K2 345 aa4.56□□□□□ -1.68
HLA-DPA3-207ENST00000454398 TUBA4BQ9H853 241 aa4.56□□□□□ -1.68
HLA-DPA3-207ENST00000454398 CHMP1AQ9HD42 196 aaPredicted RBP4.56□□□□□ -1.68
HLA-DPA3-207ENST00000454398 MBNL3Q9NUK0 354 aaKnown RBP4.56□□□□□ -1.68
HLA-DPA3-207ENST00000454398 CKLFQ9UBR5 152 aa4.56□□□□□ -1.68
HLA-DPA3-207ENST00000454398 SLC23A1Q9UHI7 598 aa4.56□□□□□ -1.68
HLA-DPA3-207ENST00000454398 JPT1Q9UK76 154 aa4.56□□□□□ -1.68
HLA-DPA3-207ENST00000454398 RNF150Q9ULK6 438 aa4.56□□□□□ -1.68
HLA-DPA3-207ENST00000454398 PKHD1P08F94 4074 aa4.56□□□□□ -1.68
HLA-DPA3-207ENST00000454398 DNAH17Q9UFH2 4485 aa4.55□□□□□ -1.68
HLA-DPA3-207ENST00000454398 TRBV5-7A0A0A0MS05 114 aa4.55□□□□□ -1.68
HLA-DPA3-207ENST00000454398 A0A0A6YYD4 124 aa4.55□□□□□ -1.68
HLA-DPA3-207ENST00000454398 CIB2O75838 187 aa4.55□□□□□ -1.68
HLA-DPA3-207ENST00000454398 SC5DO75845 299 aa4.55□□□□□ -1.68
HLA-DPA3-207ENST00000454398 RGS11O94810 467 aa4.55□□□□□ -1.68
HLA-DPA3-207ENST00000454398 HSPB1P04792 205 aaKnown RBP4.55□□□□□ -1.68
HLA-DPA3-207ENST00000454398 GSTP1P09211 210 aaKnown RBP4.55□□□□□ -1.68
HLA-DPA3-207ENST00000454398 CD7P09564 240 aa4.55□□□□□ -1.68
HLA-DPA3-207ENST00000454398 CD3GP09693 182 aa4.55□□□□□ -1.68
HLA-DPA3-207ENST00000454398 CRIP2P52943 208 aaPredicted RBP4.55□□□□□ -1.68
HLA-DPA3-207ENST00000454398 CD81P60033 236 aa4.55□□□□□ -1.68
HLA-DPA3-207ENST00000454398 TAGLNQ01995 201 aaKnown RBP4.55□□□□□ -1.68
HLA-DPA3-207ENST00000454398 RAB40BQ12829 278 aa4.55□□□□□ -1.68
HLA-DPA3-207ENST00000454398 PSG5Q15238 335 aa4.55□□□□□ -1.68
HLA-DPA3-207ENST00000454398 HMGN3Q15651 99 aa4.55□□□□□ -1.68
HLA-DPA3-207ENST00000454398 Q3ZCU0 254 aa4.55□□□□□ -1.68
HLA-DPA3-207ENST00000454398 RPL22L1Q6P5R6 122 aaKnown RBP4.55□□□□□ -1.68
HLA-DPA3-207ENST00000454398 IDO2Q6ZQW0 420 aa4.55□□□□□ -1.68
HLA-DPA3-207ENST00000454398 GTSCR1Q86UQ5 136 aa4.55□□□□□ -1.68
HLA-DPA3-207ENST00000454398 DEFB125Q8N687 156 aa4.55□□□□□ -1.68
HLA-DPA3-207ENST00000454398 ZNF383Q8NA42 475 aa4.55□□□□□ -1.68
HLA-DPA3-207ENST00000454398 POC5Q8NA72 575 aa4.55□□□□□ -1.68
HLA-DPA3-207ENST00000454398 OR9G4Q8NGQ1 327 aa4.55□□□□□ -1.68
HLA-DPA3-207ENST00000454398 RHOXF1Q8NHV9 184 aa4.55□□□□□ -1.68
HLA-DPA3-207ENST00000454398 TRUB1Q8WWH5 349 aaKnown RBP4.55□□□□□ -1.68
HLA-DPA3-207ENST00000454398 CACNG8Q8WXS5 425 aa4.55□□□□□ -1.68
HLA-DPA3-207ENST00000454398 C5orf30Q96GV9 206 aa4.55□□□□□ -1.68
HLA-DPA3-207ENST00000454398 DERL3Q96Q80 235 aa4.55□□□□□ -1.68
HLA-DPA3-207ENST00000454398 FAAP24Q9BTP7 215 aa4.55□□□□□ -1.68
HLA-DPA3-207ENST00000454398 HIPK2Q9H2X6 1198 aa4.55□□□□□ -1.68
HLA-DPA3-207ENST00000454398 SPACA1Q9HBV2 294 aa4.55□□□□□ -1.68
HLA-DPA3-207ENST00000454398 PAK1IP1Q9NWT1 392 aaPredicted RBP4.55□□□□□ -1.68
HLA-DPA3-207ENST00000454398 KCNIP1Q9NZI2 227 aa4.55□□□□□ -1.68
HLA-DPA3-207ENST00000454398 WASHC3Q9Y3C0 194 aa4.55□□□□□ -1.68
HLA-DPA3-207ENST00000454398 CEPT1Q9Y6K0 416 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms