RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 EBI3Q14213 229 aa15.93■□□□□ 0.14
COL9A3-202ENST00000452372 IZUMO1Q8IYV9 350 aa15.93■□□□□ 0.14
COL9A3-202ENST00000452372 NUDCD2Q8WVJ2 157 aa15.93■□□□□ 0.14
COL9A3-202ENST00000452372 WFDC12Q8WWY7 111 aa15.93■□□□□ 0.14
COL9A3-202ENST00000452372 AGMATQ9BSE5 352 aa15.93■□□□□ 0.14
COL9A3-202ENST00000452372 CABLES2Q9BTV7 478 aa15.93■□□□□ 0.14
COL9A3-202ENST00000452372 PRSS22Q9GZN4 317 aa15.93■□□□□ 0.14
COL9A3-202ENST00000452372 TOLLIPQ9H0E2 274 aa15.93■□□□□ 0.14
COL9A3-202ENST00000452372 PARP12Q9H0J9 701 aaKnown RBP15.93■□□□□ 0.14
COL9A3-202ENST00000452372 C11orf54Q9H0W9 315 aaPredicted RBP15.93■□□□□ 0.14
COL9A3-202ENST00000452372 IFI27L2Q9H2X8 130 aa15.93■□□□□ 0.14
COL9A3-202ENST00000452372 IGKV1D-8A0A087WSZ0 117 aa15.92■□□□□ 0.14
COL9A3-202ENST00000452372 TRBV6-7A0A0A0MS04 114 aa15.92■□□□□ 0.14
COL9A3-202ENST00000452372 ST8SIA5O15466 376 aa15.92■□□□□ 0.14
COL9A3-202ENST00000452372 SSX5O60225 188 aa15.92■□□□□ 0.14
COL9A3-202ENST00000452372 IGKV1D-33P01593 117 aa15.92■□□□□ 0.14
COL9A3-202ENST00000452372 IGKV1-33P01594 117 aa15.92■□□□□ 0.14
COL9A3-202ENST00000452372 CD1BP29016 333 aa15.92■□□□□ 0.14
COL9A3-202ENST00000452372 BLCAPP62952 87 aa15.92■□□□□ 0.14
COL9A3-202ENST00000452372 HES1Q14469 280 aa15.92■□□□□ 0.14
COL9A3-202ENST00000452372 IGSF11Q5DX21 431 aa15.92■□□□□ 0.14
COL9A3-202ENST00000452372 ZNF833PQ6ZTB9 187 aa15.92■□□□□ 0.14
COL9A3-202ENST00000452372 CLVS1Q8IUQ0 354 aaPredicted RBP15.92■□□□□ 0.14
COL9A3-202ENST00000452372 Q8N2B8 174 aa15.92■□□□□ 0.14
COL9A3-202ENST00000452372 OR2T6Q8NHC8 308 aa15.92■□□□□ 0.14
COL9A3-202ENST00000452372 ACOT12Q8WYK0 555 aa15.92■□□□□ 0.14
COL9A3-202ENST00000452372 CMTM3Q96MX0 182 aa15.92■□□□□ 0.14
COL9A3-202ENST00000452372 ST6GALNAC5Q9BVH7 336 aa15.92■□□□□ 0.14
COL9A3-202ENST00000452372 AUNIPQ9H7T9 357 aa15.92■□□□□ 0.14
COL9A3-202ENST00000452372 ZNF702PQ9H963 129 aa15.92■□□□□ 0.14
COL9A3-202ENST00000452372 RDH8Q9NYR8 311 aa15.92■□□□□ 0.14
COL9A3-202ENST00000452372 PIPOXQ9P0Z9 390 aa15.92■□□□□ 0.14
COL9A3-202ENST00000452372 SAA2-SAA4A0A096LPE2 208 aa15.91■□□□□ 0.14
COL9A3-202ENST00000452372 RAB29O14966 203 aa15.91■□□□□ 0.14
COL9A3-202ENST00000452372 BET1O15155 118 aa15.91■□□□□ 0.14
COL9A3-202ENST00000452372 SAA2P0DJI9 122 aaPredicted RBP15.91■□□□□ 0.14
COL9A3-202ENST00000452372 OR3A3P47888 321 aa15.91■□□□□ 0.14
COL9A3-202ENST00000452372 C11orf88Q6PI97 169 aa15.91■□□□□ 0.14
COL9A3-202ENST00000452372 OR10J5Q8NHC4 309 aa15.91■□□□□ 0.14
COL9A3-202ENST00000452372 CITED1Q99966 193 aa15.91■□□□□ 0.14
COL9A3-202ENST00000452372 BCL7BQ9BQE9 202 aa15.91■□□□□ 0.14
COL9A3-202ENST00000452372 COMMD3Q9UBI1 195 aa15.91■□□□□ 0.14
COL9A3-202ENST00000452372 SCOCQ9UIL1 159 aa15.91■□□□□ 0.14
COL9A3-202ENST00000452372 SIGLEC9Q9Y336 463 aa15.91■□□□□ 0.14
COL9A3-202ENST00000452372 PRKDCP78527 4128 aaKnown RBP15.91■□□□□ 0.14
COL9A3-202ENST00000452372 IGHV3-72A0A0B4J1Y9 119 aa15.9■□□□□ 0.14
COL9A3-202ENST00000452372 ZNF736B4DX44 427 aaPredicted RBP15.9■□□□□ 0.14
COL9A3-202ENST00000452372 ZNF182P17025 639 aaPredicted RBP15.9■□□□□ 0.14
COL9A3-202ENST00000452372 TMEM11P17152 192 aa15.9■□□□□ 0.14
COL9A3-202ENST00000452372 TMBIM6P55061 237 aa15.9■□□□□ 0.14
COL9A3-202ENST00000452372 FAM71F2Q6NXP2 309 aa15.9■□□□□ 0.14
COL9A3-202ENST00000452372 OR2T10Q8NGZ9 312 aa15.9■□□□□ 0.14
COL9A3-202ENST00000452372 RAB2BQ8WUD1 216 aa15.9■□□□□ 0.14
COL9A3-202ENST00000452372 ABHD14BQ96IU4 210 aa15.9■□□□□ 0.14
COL9A3-202ENST00000452372 EAF1Q96JC9 268 aaPredicted RBP15.9■□□□□ 0.14
COL9A3-202ENST00000452372 S1PR3Q99500 378 aa15.9■□□□□ 0.14
COL9A3-202ENST00000452372 ZNF251Q9BRH9 671 aa15.9■□□□□ 0.14
COL9A3-202ENST00000452372 M0QZK8 103 aa15.89■□□□□ 0.13
COL9A3-202ENST00000452372 APOA1P02647 267 aa15.89■□□□□ 0.13
COL9A3-202ENST00000452372 AMY1AP04745 511 aa15.89■□□□□ 0.13
COL9A3-202ENST00000452372 AMY2AP04746 511 aa15.89■□□□□ 0.13
COL9A3-202ENST00000452372 HNF4GQ14541 408 aa15.89■□□□□ 0.13
COL9A3-202ENST00000452372 Q6ZS46 218 aa15.89■□□□□ 0.13
COL9A3-202ENST00000452372 Q8N6K4 173 aa15.89■□□□□ 0.13
COL9A3-202ENST00000452372 AP3S1Q92572 193 aa15.89■□□□□ 0.13
COL9A3-202ENST00000452372 NABP2Q9BQ15 211 aa15.89■□□□□ 0.13
COL9A3-202ENST00000452372 MOB4Q9Y3A3 225 aa15.89■□□□□ 0.13
COL9A3-202ENST00000452372 EIF4EP06730 217 aaKnown RBP15.88■□□□□ 0.13
COL9A3-202ENST00000452372 CTXN2P0C2S0 81 aa15.88■□□□□ 0.13
COL9A3-202ENST00000452372 LSAMPQ13449 338 aa15.88■□□□□ 0.13
COL9A3-202ENST00000452372 SPCS2Q15005 226 aa15.88■□□□□ 0.13
COL9A3-202ENST00000452372 TMEM69Q5SWH9 247 aa15.88■□□□□ 0.13
COL9A3-202ENST00000452372 MZT2AQ6P582 158 aa15.88■□□□□ 0.13
COL9A3-202ENST00000452372 GINS4Q9BRT9 223 aa15.88■□□□□ 0.13
COL9A3-202ENST00000452372 MRPL20Q9BYC9 149 aaKnown RBP15.88■□□□□ 0.13
COL9A3-202ENST00000452372 SERTAD4Q9NUC0 356 aa15.88■□□□□ 0.13
COL9A3-202ENST00000452372 RNF150Q9ULK6 438 aa15.88■□□□□ 0.13
COL9A3-202ENST00000452372 FGF16O43320 207 aa15.87■□□□□ 0.13
COL9A3-202ENST00000452372 MOSP00540 346 aa15.87■□□□□ 0.13
COL9A3-202ENST00000452372 RPL39P5Q59GN2 51 aa15.87■□□□□ 0.13
COL9A3-202ENST00000452372 CNIH2Q6PI25 160 aa15.87■□□□□ 0.13
COL9A3-202ENST00000452372 ANXA10Q9UJ72 324 aa15.87■□□□□ 0.13
COL9A3-202ENST00000452372 ZNF221Q9UK13 617 aa15.87■□□□□ 0.13
COL9A3-202ENST00000452372 HPGDSO60760 199 aa15.86■□□□□ 0.13
COL9A3-202ENST00000452372 PROP1O75360 226 aa15.86■□□□□ 0.13
COL9A3-202ENST00000452372 OR8U9P0C7N5 309 aa15.86■□□□□ 0.13
COL9A3-202ENST00000452372 CT45A6P0DMU7 189 aa15.86■□□□□ 0.13
COL9A3-202ENST00000452372 CT45A5P0DMU8 189 aa15.86■□□□□ 0.13
COL9A3-202ENST00000452372 CT45A7P0DMV0 189 aa15.86■□□□□ 0.13
COL9A3-202ENST00000452372 PTHLHP12272 177 aa15.86■□□□□ 0.13
COL9A3-202ENST00000452372 TAS2R20P59543 309 aa15.86■□□□□ 0.13
COL9A3-202ENST00000452372 DEFA6Q01524 100 aa15.86■□□□□ 0.13
COL9A3-202ENST00000452372 ABCA11PQ4W5N1 156 aa15.86■□□□□ 0.13
COL9A3-202ENST00000452372 HOGA1Q86XE5 327 aa15.86■□□□□ 0.13
COL9A3-202ENST00000452372 H1FOOQ8IZA3 346 aaPredicted RBP15.86■□□□□ 0.13
COL9A3-202ENST00000452372 OR8U1Q8NH10 309 aa15.86■□□□□ 0.13
COL9A3-202ENST00000452372 GAB2Q9UQC2 676 aa15.86■□□□□ 0.13
COL9A3-202ENST00000452372 SMIM31A0A1B0GVY4 71 aa15.85■□□□□ 0.13
COL9A3-202ENST00000452372 ELK1P19419 428 aa15.85■□□□□ 0.13
COL9A3-202ENST00000452372 SOX6P35712 828 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms