RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 HLA-DRB1P01911 266 aa9.76□□□□□ -0.85
CPSF4-208ENST00000452047 VDAC1P21796 283 aa9.76□□□□□ -0.85
CPSF4-208ENST00000452047 PSMB8P28062 276 aa9.76□□□□□ -0.85
CPSF4-208ENST00000452047 CDX1P47902 265 aaPredicted RBP9.76□□□□□ -0.85
CPSF4-208ENST00000452047 HSPA13P48723 471 aa9.76□□□□□ -0.85
CPSF4-208ENST00000452047 CLDN12P56749 244 aa9.76□□□□□ -0.85
CPSF4-208ENST00000452047 RAB11BQ15907 218 aa9.76□□□□□ -0.85
CPSF4-208ENST00000452047 DEFB136Q30KP8 78 aa9.76□□□□□ -0.85
CPSF4-208ENST00000452047 MYOZ3Q8TDC0 251 aa9.76□□□□□ -0.85
CPSF4-208ENST00000452047 KCTD7Q96MP8 289 aa9.76□□□□□ -0.85
CPSF4-208ENST00000452047 AGMATQ9BSE5 352 aa9.76□□□□□ -0.85
CPSF4-208ENST00000452047 GPR61Q9BZJ8 451 aa9.76□□□□□ -0.85
CPSF4-208ENST00000452047 PIPOXQ9P0Z9 390 aa9.76□□□□□ -0.85
CPSF4-208ENST00000452047 SLC23A1Q9UHI7 598 aa9.76□□□□□ -0.85
CPSF4-208ENST00000452047 IGHV7-81A0A0B4J1V7 117 aa9.75□□□□□ -0.85
CPSF4-208ENST00000452047 WI2-2373I1.2A0A1W2PRP0 233 aa9.75□□□□□ -0.85
CPSF4-208ENST00000452047 ITGB1BP1O14713 200 aa9.75□□□□□ -0.85
CPSF4-208ENST00000452047 RAB29O14966 203 aa9.75□□□□□ -0.85
CPSF4-208ENST00000452047 NBR2O15453 112 aa9.75□□□□□ -0.85
CPSF4-208ENST00000452047 NDUFA3O95167 84 aa9.75□□□□□ -0.85
CPSF4-208ENST00000452047 OR5H8P0DN80 308 aa9.75□□□□□ -0.85
CPSF4-208ENST00000452047 PPIFP30405 207 aaKnown RBP9.75□□□□□ -0.85
CPSF4-208ENST00000452047 HLA-DRB3P79483 266 aa9.75□□□□□ -0.85
CPSF4-208ENST00000452047 PLA2G7Q13093 441 aa9.75□□□□□ -0.85
CPSF4-208ENST00000452047 SSX1Q16384 188 aa9.75□□□□□ -0.85
CPSF4-208ENST00000452047 C5orf64Q2M2E5 130 aa9.75□□□□□ -0.85
CPSF4-208ENST00000452047 RPL39P5Q59GN2 51 aa9.75□□□□□ -0.85
CPSF4-208ENST00000452047 PLAC9Q5JTB6 97 aa9.75□□□□□ -0.85
CPSF4-208ENST00000452047 FAM131AQ6UXB0 335 aa9.75□□□□□ -0.85
CPSF4-208ENST00000452047 NPBQ8NG41 125 aa9.75□□□□□ -0.85
CPSF4-208ENST00000452047 SETD6Q8TBK2 473 aa9.75□□□□□ -0.85
CPSF4-208ENST00000452047 FAM3DQ96BQ1 224 aa9.75□□□□□ -0.85
CPSF4-208ENST00000452047 ARHGAP5-AS1Q96IT6 56 aa9.75□□□□□ -0.85
CPSF4-208ENST00000452047 CNBD2Q96M20 576 aa9.75□□□□□ -0.85
CPSF4-208ENST00000452047 MCRIP2Q9BUT9 160 aaKnown RBP9.75□□□□□ -0.85
CPSF4-208ENST00000452047 Q9N2K0 584 aa9.75□□□□□ -0.85
CPSF4-208ENST00000452047 ACOT13Q9NPJ3 140 aa9.75□□□□□ -0.85
CPSF4-208ENST00000452047 C12orf4Q9NQ89 552 aa9.75□□□□□ -0.85
CPSF4-208ENST00000452047 OR1A1Q9P1Q5 309 aa9.75□□□□□ -0.85
CPSF4-208ENST00000452047 SHISA3A0PJX4 238 aa9.74□□□□□ -0.85
CPSF4-208ENST00000452047 G3V318 75 aa9.74□□□□□ -0.85
CPSF4-208ENST00000452047 ATP6V0E1O15342 81 aa9.74□□□□□ -0.85
CPSF4-208ENST00000452047 CT45A6P0DMU7 189 aa9.74□□□□□ -0.85
CPSF4-208ENST00000452047 CT45A5P0DMU8 189 aa9.74□□□□□ -0.85
CPSF4-208ENST00000452047 CT45A7P0DMV0 189 aa9.74□□□□□ -0.85
CPSF4-208ENST00000452047 VEGFCP49767 419 aa9.74□□□□□ -0.85
CPSF4-208ENST00000452047 KIR2DS1Q14954 304 aa9.74□□□□□ -0.85
CPSF4-208ENST00000452047 C2orf76Q3KRA6 126 aa9.74□□□□□ -0.85
CPSF4-208ENST00000452047 CD200R1LQ6Q8B3 271 aa9.74□□□□□ -0.85
CPSF4-208ENST00000452047 ZNF367Q7RTV3 350 aa9.74□□□□□ -0.85
CPSF4-208ENST00000452047 OR8U1Q8NH10 309 aa9.74□□□□□ -0.85
CPSF4-208ENST00000452047 C4orf3Q8WVX3 66 aa9.74□□□□□ -0.85
CPSF4-208ENST00000452047 ABHD14BQ96IU4 210 aa9.74□□□□□ -0.85
CPSF4-208ENST00000452047 CHCHD6Q9BRQ6 235 aa9.74□□□□□ -0.85
CPSF4-208ENST00000452047 PECRQ9BY49 303 aa9.74□□□□□ -0.85
CPSF4-208ENST00000452047 OR51J1Q9H342 316 aa9.74□□□□□ -0.85
CPSF4-208ENST00000452047 NDUFB11Q9NX14 153 aa9.74□□□□□ -0.85
CPSF4-208ENST00000452047 MGAT4AQ9UM21 535 aa9.74□□□□□ -0.85
CPSF4-208ENST00000452047 V9GY05 133 aa9.74□□□□□ -0.85
CPSF4-208ENST00000452047 DNAH9Q9NYC9 4486 aa9.74□□□□□ -0.85
CPSF4-208ENST00000452047 IGKV1-6A0A0C4DH72 117 aa9.73□□□□□ -0.85
CPSF4-208ENST00000452047 TMEM272A0A1B0GTI8 110 aa9.73□□□□□ -0.85
CPSF4-208ENST00000452047 OR5H14A6NHG9 310 aa9.73□□□□□ -0.85
CPSF4-208ENST00000452047 H0YJW9 148 aa9.73□□□□□ -0.85
CPSF4-208ENST00000452047 DENRO43583 198 aaKnown RBP9.73□□□□□ -0.85
CPSF4-208ENST00000452047 PROP1O75360 226 aa9.73□□□□□ -0.85
CPSF4-208ENST00000452047 IGLV1-40P01703 118 aa9.73□□□□□ -0.85
CPSF4-208ENST00000452047 SCTP09683 121 aa9.73□□□□□ -0.85
CPSF4-208ENST00000452047 ZBTB25P24278 435 aa9.73□□□□□ -0.85
CPSF4-208ENST00000452047 PSMD7P51665 324 aa9.73□□□□□ -0.85
CPSF4-208ENST00000452047 NDPQ00604 133 aa9.73□□□□□ -0.85
CPSF4-208ENST00000452047 FHL3Q13643 280 aa9.73□□□□□ -0.85
CPSF4-208ENST00000452047 KIAA0141Q14154 515 aaPredicted RBP9.73□□□□□ -0.85
CPSF4-208ENST00000452047 C19orf54Q5BKX5 351 aa9.73□□□□□ -0.85
CPSF4-208ENST00000452047 HES5Q5TA89 166 aa9.73□□□□□ -0.85
CPSF4-208ENST00000452047 GLDNQ6ZMI3 551 aaPredicted RBP9.73□□□□□ -0.85
CPSF4-208ENST00000452047 OR56B1Q8NGI3 324 aa9.73□□□□□ -0.85
CPSF4-208ENST00000452047 OR5AN1Q8NGI8 311 aa9.73□□□□□ -0.85
CPSF4-208ENST00000452047 EDARADDQ8WWZ3 215 aa9.73□□□□□ -0.85
CPSF4-208ENST00000452047 DPF1Q92782 380 aa9.73□□□□□ -0.85
CPSF4-208ENST00000452047 PTX4Q96A99 478 aa9.73□□□□□ -0.85
CPSF4-208ENST00000452047 CMSS1Q9BQ75 279 aaKnown RBP9.73□□□□□ -0.85
CPSF4-208ENST00000452047 C11orf54Q9H0W9 315 aaPredicted RBP9.73□□□□□ -0.85
CPSF4-208ENST00000452047 KLK15Q9H2R5 256 aa9.73□□□□□ -0.85
CPSF4-208ENST00000452047 GHITMQ9H3K2 345 aa9.73□□□□□ -0.85
CPSF4-208ENST00000452047 PARP11Q9NR21 331 aa9.73□□□□□ -0.85
CPSF4-208ENST00000452047 BLOC1S6Q9UL45 172 aa9.73□□□□□ -0.85
CPSF4-208ENST00000452047 KCNK7Q9Y2U2 307 aa9.73□□□□□ -0.85
CPSF4-208ENST00000452047 WSB1Q9Y6I7 421 aa9.73□□□□□ -0.85
CPSF4-208ENST00000452047 TRAV1-2A0A0B4J238 106 aa9.72□□□□□ -0.85
CPSF4-208ENST00000452047 CEACAM6P40199 344 aa9.72□□□□□ -0.85
CPSF4-208ENST00000452047 CRIP2P52943 208 aaPredicted RBP9.72□□□□□ -0.85
CPSF4-208ENST00000452047 OR10A3P58181 314 aa9.72□□□□□ -0.85
CPSF4-208ENST00000452047 MOGAT2Q3SYC2 334 aa9.72□□□□□ -0.85
CPSF4-208ENST00000452047 LIN54Q6MZP7 749 aa9.72□□□□□ -0.85
CPSF4-208ENST00000452047 KIAA1456Q9P272 454 aa9.72□□□□□ -0.85
CPSF4-208ENST00000452047 RAB22AQ9UL26 194 aa9.72□□□□□ -0.85
CPSF4-208ENST00000452047 RAB26Q9ULW5 256 aa9.72□□□□□ -0.85
CPSF4-208ENST00000452047 FBXO7Q9Y3I1 522 aa9.72□□□□□ -0.85
CPSF4-208ENST00000452047 TRAV41A0A0B4J266 112 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms