RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 ABCG5Q9H222 651 aa10.07□□□□□ -0.8
PRPF40A-203ENST00000448428 LIN7CQ9NUP9 197 aaKnown RBP10.07□□□□□ -0.8
PRPF40A-203ENST00000448428 PIPOXQ9P0Z9 390 aa10.07□□□□□ -0.8
PRPF40A-203ENST00000448428 DAPK2Q9UIK4 370 aa10.07□□□□□ -0.8
PRPF40A-203ENST00000448428 LINC00527Q9UJ94 153 aa10.07□□□□□ -0.8
PRPF40A-203ENST00000448428 VWFP04275 2813 aa10.07□□□□□ -0.8
PRPF40A-203ENST00000448428 LOC100506127A0A0U1RQW1 187 aa10.06□□□□□ -0.8
PRPF40A-203ENST00000448428 PSMB11A5LHX3 300 aa10.06□□□□□ -0.8
PRPF40A-203ENST00000448428 SERPINE3A8MV23 424 aa10.06□□□□□ -0.8
PRPF40A-203ENST00000448428 RAB29O14966 203 aa10.06□□□□□ -0.8
PRPF40A-203ENST00000448428 KCNAB3O43448 404 aa10.06□□□□□ -0.8
PRPF40A-203ENST00000448428 CLEC2LP0C7M8 214 aa10.06□□□□□ -0.8
PRPF40A-203ENST00000448428 HIST1H1DP16402 221 aaKnown RBP10.06□□□□□ -0.8
PRPF40A-203ENST00000448428 MRPS15P82914 257 aaKnown RBP10.06□□□□□ -0.8
PRPF40A-203ENST00000448428 MXD1Q05195 221 aa10.06□□□□□ -0.8
PRPF40A-203ENST00000448428 RPL39P5Q59GN2 51 aa10.06□□□□□ -0.8
PRPF40A-203ENST00000448428 FAM71E2Q8N5Q1 922 aa10.06□□□□□ -0.8
PRPF40A-203ENST00000448428 OR4F17Q8NGA8 305 aa10.06□□□□□ -0.8
PRPF40A-203ENST00000448428 OR4X2Q8NGF9 303 aa10.06□□□□□ -0.8
PRPF40A-203ENST00000448428 CHPT1Q8WUD6 406 aa10.06□□□□□ -0.8
PRPF40A-203ENST00000448428 OR4F4Q96R69 305 aa10.06□□□□□ -0.8
PRPF40A-203ENST00000448428 RASL11BQ9BPW5 248 aa10.06□□□□□ -0.8
PRPF40A-203ENST00000448428 CENPOQ9BU64 300 aa10.06□□□□□ -0.8
PRPF40A-203ENST00000448428 ZNF230Q9UIE0 474 aaPredicted RBP10.06□□□□□ -0.8
PRPF40A-203ENST00000448428 ELF5Q9UKW6 265 aaPredicted RBP10.06□□□□□ -0.8
PRPF40A-203ENST00000448428 RNF150Q9ULK6 438 aa10.06□□□□□ -0.8
PRPF40A-203ENST00000448428 TSSC4Q9Y5U2 329 aaPredicted RBP10.06□□□□□ -0.8
PRPF40A-203ENST00000448428 WIPF1O43516 503 aa10.05□□□□□ -0.8
PRPF40A-203ENST00000448428 PROP1O75360 226 aa10.05□□□□□ -0.8
PRPF40A-203ENST00000448428 FCGR3AP08637 254 aa10.05□□□□□ -0.8
PRPF40A-203ENST00000448428 GSTT2P0CG29 244 aa10.05□□□□□ -0.8
PRPF40A-203ENST00000448428 GSTT2BP0CG30 244 aa10.05□□□□□ -0.8
PRPF40A-203ENST00000448428 CT45A6P0DMU7 189 aa10.05□□□□□ -0.8
PRPF40A-203ENST00000448428 CT45A5P0DMU8 189 aa10.05□□□□□ -0.8
PRPF40A-203ENST00000448428 CT45A7P0DMV0 189 aa10.05□□□□□ -0.8
PRPF40A-203ENST00000448428 SNRPBP14678 240 aaKnown RBP10.05□□□□□ -0.8
PRPF40A-203ENST00000448428 GPR12P47775 334 aa10.05□□□□□ -0.8
PRPF40A-203ENST00000448428 CDNFQ49AH0 187 aa10.05□□□□□ -0.8
PRPF40A-203ENST00000448428 IGSF11Q5DX21 431 aa10.05□□□□□ -0.8
PRPF40A-203ENST00000448428 FAM71F2Q6NXP2 309 aa10.05□□□□□ -0.8
PRPF40A-203ENST00000448428 SFXN4Q6P4A7 337 aa10.05□□□□□ -0.8
PRPF40A-203ENST00000448428 C1QL4Q86Z23 238 aa10.05□□□□□ -0.8
PRPF40A-203ENST00000448428 FOXRED2Q8IWF2 684 aa10.05□□□□□ -0.8
PRPF40A-203ENST00000448428 STPG2Q8N412 459 aa10.05□□□□□ -0.8
PRPF40A-203ENST00000448428 TSPAN14Q8NG11 270 aa10.05□□□□□ -0.8
PRPF40A-203ENST00000448428 OR4A4PQ8NGN8 299 aa10.05□□□□□ -0.8
PRPF40A-203ENST00000448428 EDARADDQ8WWZ3 215 aa10.05□□□□□ -0.8
PRPF40A-203ENST00000448428 MAFIPQ8WZ33 124 aa10.05□□□□□ -0.8
PRPF40A-203ENST00000448428 GHITMQ9H3K2 345 aa10.05□□□□□ -0.8
PRPF40A-203ENST00000448428 A0A087WXM4 84 aa10.04□□□□□ -0.8
PRPF40A-203ENST00000448428 AP4M1O00189 453 aa10.04□□□□□ -0.8
PRPF40A-203ENST00000448428 FABP7O15540 132 aa10.04□□□□□ -0.8
PRPF40A-203ENST00000448428 TNFAIP8O95379 198 aa10.04□□□□□ -0.8
PRPF40A-203ENST00000448428 CNTFRP26992 372 aa10.04□□□□□ -0.8
PRPF40A-203ENST00000448428 SOX6P35712 828 aa10.04□□□□□ -0.8
PRPF40A-203ENST00000448428 ACTBP60709 375 aa10.04□□□□□ -0.8
PRPF40A-203ENST00000448428 ARFRP1Q13795 201 aa10.04□□□□□ -0.8
PRPF40A-203ENST00000448428 KIR2DS1Q14954 304 aa10.04□□□□□ -0.8
PRPF40A-203ENST00000448428 MMDQ15546 238 aa10.04□□□□□ -0.8
PRPF40A-203ENST00000448428 GLDNQ6ZMI3 551 aaPredicted RBP10.04□□□□□ -0.8
PRPF40A-203ENST00000448428 LGALS14Q8TCE9 139 aa10.04□□□□□ -0.8
PRPF40A-203ENST00000448428 PHF21AQ96BD5 680 aa10.04□□□□□ -0.8
PRPF40A-203ENST00000448428 HSPB9Q9BQS6 159 aa10.04□□□□□ -0.8
PRPF40A-203ENST00000448428 TOLLIPQ9H0E2 274 aa10.04□□□□□ -0.8
PRPF40A-203ENST00000448428 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.04□□□□□ -0.89e-6■□□□□ 9.4
PRPF40A-203ENST00000448428 RDH8Q9NYR8 311 aa10.04□□□□□ -0.8
PRPF40A-203ENST00000448428 IGKV1D-8A0A087WSZ0 117 aa10.03□□□□□ -0.8
PRPF40A-203ENST00000448428 BET1O15155 118 aa10.03□□□□□ -0.8
PRPF40A-203ENST00000448428 TALDO1P37837 337 aa10.03□□□□□ -0.8
PRPF40A-203ENST00000448428 SERPINB10P48595 397 aa10.03□□□□□ -0.8
PRPF40A-203ENST00000448428 KHDC1LQ5JSQ8 128 aa10.03□□□□□ -0.8
PRPF40A-203ENST00000448428 IDNKQ5T6J7 187 aa10.03□□□□□ -0.8
PRPF40A-203ENST00000448428 FAM131AQ6UXB0 335 aa10.03□□□□□ -0.8
PRPF40A-203ENST00000448428 OR5H6Q8NGV6 325 aa10.03□□□□□ -0.8
PRPF40A-203ENST00000448428 ZNF221Q9UK13 617 aa10.03□□□□□ -0.8
PRPF40A-203ENST00000448428 TRBV6-7A0A0A0MS04 114 aa10.02□□□□□ -0.81
PRPF40A-203ENST00000448428 OR5H14A6NHG9 310 aa10.02□□□□□ -0.81
PRPF40A-203ENST00000448428 G3V4G9 280 aa10.02□□□□□ -0.81
PRPF40A-203ENST00000448428 H0YJW9 148 aa10.02□□□□□ -0.81
PRPF40A-203ENST00000448428 NBR2O15453 112 aa10.02□□□□□ -0.81
PRPF40A-203ENST00000448428 MC5RP33032 325 aa10.02□□□□□ -0.81
PRPF40A-203ENST00000448428 TGFBR1P36897 503 aa10.02□□□□□ -0.81
PRPF40A-203ENST00000448428 LINC00205P59089 165 aa10.02□□□□□ -0.81
PRPF40A-203ENST00000448428 SLC35B1P78383 322 aa10.02□□□□□ -0.81
PRPF40A-203ENST00000448428 ARL6IP1Q15041 203 aa10.02□□□□□ -0.81
PRPF40A-203ENST00000448428 SRSF7Q16629 238 aaKnown RBP eCLIP10.02□□□□□ -0.81
PRPF40A-203ENST00000448428 HACD4Q5VWC8 232 aa10.02□□□□□ -0.81
PRPF40A-203ENST00000448428 Q6ZS49 121 aa10.02□□□□□ -0.81
PRPF40A-203ENST00000448428 DRAXINQ8NBI3 349 aaPredicted RBP10.02□□□□□ -0.81
PRPF40A-203ENST00000448428 NPBQ8NG41 125 aa10.02□□□□□ -0.81
PRPF40A-203ENST00000448428 OR5AN1Q8NGI8 311 aa10.02□□□□□ -0.81
PRPF40A-203ENST00000448428 OR10J5Q8NHC4 309 aa10.02□□□□□ -0.81
PRPF40A-203ENST00000448428 YIPF6Q96EC8 236 aa10.02□□□□□ -0.81
PRPF40A-203ENST00000448428 CABLES2Q9BTV7 478 aa10.02□□□□□ -0.81
PRPF40A-203ENST00000448428 ZNF107Q9UII5 783 aaPredicted RBP10.02□□□□□ -0.81
PRPF40A-203ENST00000448428 TMEM235A6NFC5 223 aa10.01□□□□□ -0.81
PRPF40A-203ENST00000448428 TRIM64CA6NLI5 447 aa10.01□□□□□ -0.81
PRPF40A-203ENST00000448428 H7C2Y5 167 aa10.01□□□□□ -0.81
PRPF40A-203ENST00000448428 AIREO43918 545 aa10.01□□□□□ -0.81
PRPF40A-203ENST00000448428 DIRAS3O95661 229 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms