RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 BLCAPP62952 87 aa9.52□□□□□ -0.89
RFC4-208ENST00000447345 SPCS2Q15005 226 aa9.52□□□□□ -0.89
RFC4-208ENST00000447345 PNLIPRP3Q17RR3 467 aa9.52□□□□□ -0.89
RFC4-208ENST00000447345 ABCA11PQ4W5N1 156 aa9.52□□□□□ -0.89
RFC4-208ENST00000447345 RPL39P5Q59GN2 51 aa9.52□□□□□ -0.89
RFC4-208ENST00000447345 C9orf152Q5JTZ5 239 aa9.52□□□□□ -0.89
RFC4-208ENST00000447345 TMEM69Q5SWH9 247 aa9.52□□□□□ -0.89
RFC4-208ENST00000447345 HIST2H2BDQ6DRA6 164 aa9.52□□□□□ -0.89
RFC4-208ENST00000447345 OR10J5Q8NHC4 309 aa9.52□□□□□ -0.89
RFC4-208ENST00000447345 EDARADDQ8WWZ3 215 aa9.52□□□□□ -0.89
RFC4-208ENST00000447345 S100A16Q96FQ6 103 aaKnown RBP9.52□□□□□ -0.89
RFC4-208ENST00000447345 AKR1E2Q96JD6 320 aa9.52□□□□□ -0.89
RFC4-208ENST00000447345 GINS4Q9BRT9 223 aa9.52□□□□□ -0.89
RFC4-208ENST00000447345 CABLES2Q9BTV7 478 aa9.52□□□□□ -0.89
RFC4-208ENST00000447345 ZNF747Q9BV97 191 aa9.52□□□□□ -0.89
RFC4-208ENST00000447345 PRSS22Q9GZN4 317 aa9.52□□□□□ -0.89
RFC4-208ENST00000447345 C11orf54Q9H0W9 315 aaPredicted RBP9.52□□□□□ -0.89
RFC4-208ENST00000447345 SCOCQ9UIL1 159 aa9.52□□□□□ -0.89
RFC4-208ENST00000447345 RNF150Q9ULK6 438 aa9.52□□□□□ -0.89
RFC4-208ENST00000447345 MOB4Q9Y3A3 225 aa9.52□□□□□ -0.89
RFC4-208ENST00000447345 A0A0A6YYH2 397 aa9.51□□□□□ -0.89
RFC4-208ENST00000447345 A6NJ64 397 aa9.51□□□□□ -0.89
RFC4-208ENST00000447345 J3QRK9 145 aa9.51□□□□□ -0.89
RFC4-208ENST00000447345 LANCL1O43813 399 aa9.51□□□□□ -0.89
RFC4-208ENST00000447345 HPGDSO60760 199 aa9.51□□□□□ -0.89
RFC4-208ENST00000447345 NOL3O60936 208 aaKnown RBP9.51□□□□□ -0.89
RFC4-208ENST00000447345 RPL5P46777 297 aaKnown RBP9.51□□□□□ -0.89
RFC4-208ENST00000447345 PROK1P58294 105 aa9.51□□□□□ -0.89
RFC4-208ENST00000447345 KRTAP10-3P60369 221 aa9.51□□□□□ -0.89
RFC4-208ENST00000447345 PITPNAQ00169 270 aa9.51□□□□□ -0.89
RFC4-208ENST00000447345 LSAMPQ13449 338 aa9.51□□□□□ -0.89
RFC4-208ENST00000447345 LY6G6FQ5SQ64 297 aa9.51□□□□□ -0.89
RFC4-208ENST00000447345 ZNF833PQ6ZTB9 187 aa9.51□□□□□ -0.89
RFC4-208ENST00000447345 C16orf82Q7Z2V1 217 aa9.51□□□□□ -0.89
RFC4-208ENST00000447345 KLHDC1Q8N7A1 406 aa9.51□□□□□ -0.89
RFC4-208ENST00000447345 GVQW1Q8N7I0 195 aa9.51□□□□□ -0.89
RFC4-208ENST00000447345 KCTD12Q96CX2 325 aaKnown RBP9.51□□□□□ -0.89
RFC4-208ENST00000447345 EAF1Q96JC9 268 aaPredicted RBP9.51□□□□□ -0.89
RFC4-208ENST00000447345 ABCG5Q9H222 651 aa9.51□□□□□ -0.89
RFC4-208ENST00000447345 AUNIPQ9H7T9 357 aa9.51□□□□□ -0.89
RFC4-208ENST00000447345 TRBV6-7A0A0A0MS04 114 aa9.5□□□□□ -0.89
RFC4-208ENST00000447345 NCBP2LA6PVI3 153 aaKnown RBP9.5□□□□□ -0.89
RFC4-208ENST00000447345 RAB29O14966 203 aa9.5□□□□□ -0.89
RFC4-208ENST00000447345 XRCC3O43542 346 aa9.5□□□□□ -0.89
RFC4-208ENST00000447345 PEX14O75381 377 aa9.5□□□□□ -0.89
RFC4-208ENST00000447345 AMY1AP04745 511 aa9.5□□□□□ -0.89
RFC4-208ENST00000447345 AMY2AP04746 511 aa9.5□□□□□ -0.89
RFC4-208ENST00000447345 OR8U9P0C7N5 309 aa9.5□□□□□ -0.89
RFC4-208ENST00000447345 VDAC2P45880 294 aaPredicted RBP9.5□□□□□ -0.89
RFC4-208ENST00000447345 GPR12P47775 334 aa9.5□□□□□ -0.89
RFC4-208ENST00000447345 TAS2R20P59543 309 aa9.5□□□□□ -0.89
RFC4-208ENST00000447345 SHISA2Q6UWI4 295 aa9.5□□□□□ -0.89
RFC4-208ENST00000447345 GLDNQ6ZMI3 551 aaPredicted RBP9.5□□□□□ -0.89
RFC4-208ENST00000447345 THNSL2Q86YJ6 484 aa9.5□□□□□ -0.89
RFC4-208ENST00000447345 C11orf44Q8N8P7 122 aa9.5□□□□□ -0.89
RFC4-208ENST00000447345 OR2T10Q8NGZ9 312 aa9.5□□□□□ -0.89
RFC4-208ENST00000447345 OR8U1Q8NH10 309 aa9.5□□□□□ -0.89
RFC4-208ENST00000447345 RAB2BQ8WUD1 216 aa9.5□□□□□ -0.89
RFC4-208ENST00000447345 AP3S1Q92572 193 aa9.5□□□□□ -0.89
RFC4-208ENST00000447345 S1PR3Q99500 378 aa9.5□□□□□ -0.89
RFC4-208ENST00000447345 NABP2Q9BQ15 211 aa9.5□□□□□ -0.89
RFC4-208ENST00000447345 OR2D2Q9H210 308 aa9.5□□□□□ -0.89
RFC4-208ENST00000447345 PIPOXQ9P0Z9 390 aa9.5□□□□□ -0.89
RFC4-208ENST00000447345 ZNF221Q9UK13 617 aa9.5□□□□□ -0.89
RFC4-208ENST00000447345 RBM7Q9Y580 266 aaKnown RBP9.5□□□□□ -0.89
RFC4-208ENST00000447345 CCDC160A6NGH7 325 aa9.49□□□□□ -0.89
RFC4-208ENST00000447345 FAM25AB3EWG3 89 aa9.49□□□□□ -0.89
RFC4-208ENST00000447345 FAM25CB3EWG5 89 aa9.49□□□□□ -0.89
RFC4-208ENST00000447345 FAM25GB3EWG6 89 aa9.49□□□□□ -0.89
RFC4-208ENST00000447345 MOSP00540 346 aa9.49□□□□□ -0.89
RFC4-208ENST00000447345 ZNF182P17025 639 aaPredicted RBP9.49□□□□□ -0.89
RFC4-208ENST00000447345 ELK1P19419 428 aa9.49□□□□□ -0.89
RFC4-208ENST00000447345 CD1BP29016 333 aa9.49□□□□□ -0.89
RFC4-208ENST00000447345 ARPC4P59998 168 aa9.49□□□□□ -0.89
RFC4-208ENST00000447345 SRSF7Q16629 238 aaKnown RBP eCLIP9.49□□□□□ -0.892e-6■■■■□ 21.1
RFC4-208ENST00000447345 FAM131AQ6UXB0 335 aa9.49□□□□□ -0.89
RFC4-208ENST00000447345 Q6ZS49 121 aa9.49□□□□□ -0.89
RFC4-208ENST00000447345 C5orf56Q8N8D9 126 aa9.49□□□□□ -0.89
RFC4-208ENST00000447345 DRAXINQ8NBI3 349 aaPredicted RBP9.49□□□□□ -0.89
RFC4-208ENST00000447345 BEST4Q8NFU0 473 aa9.49□□□□□ -0.89
RFC4-208ENST00000447345 ACOT12Q8WYK0 555 aa9.49□□□□□ -0.89
RFC4-208ENST00000447345 ZNF251Q9BRH9 671 aa9.49□□□□□ -0.89
RFC4-208ENST00000447345 AGMATQ9BSE5 352 aa9.49□□□□□ -0.89
RFC4-208ENST00000447345 IFT46Q9NQC8 304 aa9.49□□□□□ -0.89
RFC4-208ENST00000447345 SERTAD4Q9NUC0 356 aa9.49□□□□□ -0.89
RFC4-208ENST00000447345 ANXA10Q9UJ72 324 aa9.49□□□□□ -0.89
RFC4-208ENST00000447345 MRPS7Q9Y2R9 242 aaKnown RBP9.49□□□□□ -0.89
RFC4-208ENST00000447345 M0QZK8 103 aa9.48□□□□□ -0.89
RFC4-208ENST00000447345 M0R1X1 148 aa9.48□□□□□ -0.89
RFC4-208ENST00000447345 ITGB1BP1O14713 200 aa9.48□□□□□ -0.89
RFC4-208ENST00000447345 APOA1P02647 267 aa9.48□□□□□ -0.89
RFC4-208ENST00000447345 NFYAP23511 347 aaPredicted RBP9.48□□□□□ -0.89
RFC4-208ENST00000447345 SOX6P35712 828 aa9.48□□□□□ -0.89
RFC4-208ENST00000447345 TMBIM6P55061 237 aa9.48□□□□□ -0.89
RFC4-208ENST00000447345 EBI3Q14213 229 aa9.48□□□□□ -0.89
RFC4-208ENST00000447345 RNASE12Q5GAN4 147 aaKnown RBP9.48□□□□□ -0.89
RFC4-208ENST00000447345 FAM71F2Q6NXP2 309 aa9.48□□□□□ -0.89
RFC4-208ENST00000447345 MZT2AQ6P582 158 aa9.48□□□□□ -0.89
RFC4-208ENST00000447345 C11orf88Q6PI97 169 aa9.48□□□□□ -0.89
RFC4-208ENST00000447345 SNX29P2Q8IUI4 249 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms