RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 CD1BP29016 333 aa13.95□□□□□ -0.18
SMARCAL1-209ENST00000444508 RPL5P46777 297 aaKnown RBP13.95□□□□□ -0.18
SMARCAL1-209ENST00000444508 PROK1P58294 105 aa13.95□□□□□ -0.18
SMARCAL1-209ENST00000444508 HNF4GQ14541 408 aa13.95□□□□□ -0.18
SMARCAL1-209ENST00000444508 IGSF11Q5DX21 431 aa13.95□□□□□ -0.18
SMARCAL1-209ENST00000444508 CLVS1Q8IUQ0 354 aaPredicted RBP13.95□□□□□ -0.18
SMARCAL1-209ENST00000444508 ODF3L1Q8IXM7 274 aa13.95□□□□□ -0.18
SMARCAL1-209ENST00000444508 OR2T10Q8NGZ9 312 aa13.95□□□□□ -0.18
SMARCAL1-209ENST00000444508 ACOT12Q8WYK0 555 aa13.95□□□□□ -0.18
SMARCAL1-209ENST00000444508 AP3S1Q92572 193 aa13.95□□□□□ -0.18
SMARCAL1-209ENST00000444508 S1PR3Q99500 378 aa13.95□□□□□ -0.18
SMARCAL1-209ENST00000444508 CABLES2Q9BTV7 478 aa13.95□□□□□ -0.18
SMARCAL1-209ENST00000444508 ST6GALNAC5Q9BVH7 336 aa13.95□□□□□ -0.18
SMARCAL1-209ENST00000444508 PARP12Q9H0J9 701 aaKnown RBP13.95□□□□□ -0.18
SMARCAL1-209ENST00000444508 C11orf54Q9H0W9 315 aaPredicted RBP13.95□□□□□ -0.18
SMARCAL1-209ENST00000444508 RDH8Q9NYR8 311 aa13.95□□□□□ -0.18
SMARCAL1-209ENST00000444508 OR3A3P47888 321 aa13.94□□□□□ -0.18
SMARCAL1-209ENST00000444508 BLCAPP62952 87 aa13.94□□□□□ -0.18
SMARCAL1-209ENST00000444508 HERPUD1Q15011 391 aa13.94□□□□□ -0.18
SMARCAL1-209ENST00000444508 FBLN7Q53RD9 439 aa13.94□□□□□ -0.18
SMARCAL1-209ENST00000444508 FAM71F2Q6NXP2 309 aa13.94□□□□□ -0.18
SMARCAL1-209ENST00000444508 ZNF833PQ6ZTB9 187 aa13.94□□□□□ -0.18
SMARCAL1-209ENST00000444508 Q8N2B8 174 aa13.94□□□□□ -0.18
SMARCAL1-209ENST00000444508 GINS4Q9BRT9 223 aa13.94□□□□□ -0.18
SMARCAL1-209ENST00000444508 AUNIPQ9H7T9 357 aa13.94□□□□□ -0.18
SMARCAL1-209ENST00000444508 COMMD3Q9UBI1 195 aa13.94□□□□□ -0.18
SMARCAL1-209ENST00000444508 SCOCQ9UIL1 159 aa13.94□□□□□ -0.18
SMARCAL1-209ENST00000444508 TRBV6-7A0A0A0MS04 114 aa13.93□□□□□ -0.18
SMARCAL1-209ENST00000444508 XRCC3O43542 346 aa13.93□□□□□ -0.18
SMARCAL1-209ENST00000444508 SSX5O60225 188 aa13.93□□□□□ -0.18
SMARCAL1-209ENST00000444508 NOL3O60936 208 aaKnown RBP13.93□□□□□ -0.18
SMARCAL1-209ENST00000444508 PEX14O75381 377 aa13.93□□□□□ -0.18
SMARCAL1-209ENST00000444508 MOSP00540 346 aa13.93□□□□□ -0.18
SMARCAL1-209ENST00000444508 LSAMPQ13449 338 aa13.93□□□□□ -0.18
SMARCAL1-209ENST00000444508 EBI3Q14213 229 aa13.93□□□□□ -0.18
SMARCAL1-209ENST00000444508 ABCA11PQ4W5N1 156 aa13.93□□□□□ -0.18
SMARCAL1-209ENST00000444508 TMEM69Q5SWH9 247 aa13.93□□□□□ -0.18
SMARCAL1-209ENST00000444508 MZT2AQ6P582 158 aa13.93□□□□□ -0.18
SMARCAL1-209ENST00000444508 RAB2BQ8WUD1 216 aa13.93□□□□□ -0.18
SMARCAL1-209ENST00000444508 ABHD14BQ96IU4 210 aa13.93□□□□□ -0.18
SMARCAL1-209ENST00000444508 EAF1Q96JC9 268 aaPredicted RBP13.93□□□□□ -0.18
SMARCAL1-209ENST00000444508 MRPL20Q9BYC9 149 aaKnown RBP13.93□□□□□ -0.18
SMARCAL1-209ENST00000444508 TOLLIPQ9H0E2 274 aa13.93□□□□□ -0.18
SMARCAL1-209ENST00000444508 ZNF221Q9UK13 617 aa13.93□□□□□ -0.18
SMARCAL1-209ENST00000444508 CTXN2P0C2S0 81 aa13.92□□□□□ -0.18
SMARCAL1-209ENST00000444508 VDAC2P45880 294 aaPredicted RBP13.92□□□□□ -0.18
SMARCAL1-209ENST00000444508 GPR12P47775 334 aa13.92□□□□□ -0.18
SMARCAL1-209ENST00000444508 RPL39P5Q59GN2 51 aa13.92□□□□□ -0.18
SMARCAL1-209ENST00000444508 CMTM3Q96MX0 182 aa13.92□□□□□ -0.18
SMARCAL1-209ENST00000444508 NABP2Q9BQ15 211 aa13.92□□□□□ -0.18
SMARCAL1-209ENST00000444508 AGMATQ9BSE5 352 aa13.92□□□□□ -0.18
SMARCAL1-209ENST00000444508 RNF150Q9ULK6 438 aa13.92□□□□□ -0.18
SMARCAL1-209ENST00000444508 IGKV1D-8A0A087WSZ0 117 aa13.91□□□□□ -0.18
SMARCAL1-209ENST00000444508 NCBP2LA6PVI3 153 aaKnown RBP13.91□□□□□ -0.18
SMARCAL1-209ENST00000444508 ZNF736B4DX44 427 aaPredicted RBP13.91□□□□□ -0.18
SMARCAL1-209ENST00000444508 FGF16O43320 207 aa13.91□□□□□ -0.18
SMARCAL1-209ENST00000444508 APOA1P02647 267 aa13.91□□□□□ -0.18
SMARCAL1-209ENST00000444508 VSIG10L2P0DP72 767 aa13.91□□□□□ -0.18
SMARCAL1-209ENST00000444508 ZNF182P17025 639 aaPredicted RBP13.91□□□□□ -0.18
SMARCAL1-209ENST00000444508 CBX5P45973 191 aa13.91□□□□□ -0.18
SMARCAL1-209ENST00000444508 TMBIM6P55061 237 aa13.91□□□□□ -0.18
SMARCAL1-209ENST00000444508 C9orf152Q5JTZ5 239 aa13.91□□□□□ -0.18
SMARCAL1-209ENST00000444508 KLHDC1Q8N7A1 406 aa13.91□□□□□ -0.18
SMARCAL1-209ENST00000444508 CITED1Q99966 193 aa13.91□□□□□ -0.18
SMARCAL1-209ENST00000444508 BCL7BQ9BQE9 202 aa13.91□□□□□ -0.18
SMARCAL1-209ENST00000444508 RBM7Q9Y580 266 aaKnown RBP13.91□□□□□ -0.18
SMARCAL1-209ENST00000444508 SMIM31A0A1B0GVY4 71 aa13.9□□□□□ -0.18
SMARCAL1-209ENST00000444508 EIF4EP06730 217 aaKnown RBP13.9□□□□□ -0.18
SMARCAL1-209ENST00000444508 SOX6P35712 828 aa13.9□□□□□ -0.18
SMARCAL1-209ENST00000444508 TAS2R20P59543 309 aa13.9□□□□□ -0.18
SMARCAL1-209ENST00000444508 SRSF4Q08170 494 aaKnown RBP13.9□□□□□ -0.18
SMARCAL1-209ENST00000444508 CNIH2Q6PI25 160 aa13.9□□□□□ -0.18
SMARCAL1-209ENST00000444508 Q6ZS46 218 aa13.9□□□□□ -0.18
SMARCAL1-209ENST00000444508 Q8N6K4 173 aa13.9□□□□□ -0.18
SMARCAL1-209ENST00000444508 BEST4Q8NFU0 473 aa13.9□□□□□ -0.18
SMARCAL1-209ENST00000444508 OR8H1Q8NGG4 311 aa13.9□□□□□ -0.18
SMARCAL1-209ENST00000444508 ZNF251Q9BRH9 671 aa13.9□□□□□ -0.18
SMARCAL1-209ENST00000444508 SERTAD4Q9NUC0 356 aa13.9□□□□□ -0.18
SMARCAL1-209ENST00000444508 ANXA10Q9UJ72 324 aa13.9□□□□□ -0.18
SMARCAL1-209ENST00000444508 SH2D7A6NKC9 451 aaPredicted RBP13.89□□□□□ -0.19
SMARCAL1-209ENST00000444508 AMY1AP04745 511 aa13.89□□□□□ -0.19
SMARCAL1-209ENST00000444508 AMY2AP04746 511 aa13.89□□□□□ -0.19
SMARCAL1-209ENST00000444508 OR8U9P0C7N5 309 aa13.89□□□□□ -0.19
SMARCAL1-209ENST00000444508 ARPC4P59998 168 aa13.89□□□□□ -0.19
SMARCAL1-209ENST00000444508 KRTAP10-3P60369 221 aa13.89□□□□□ -0.19
SMARCAL1-209ENST00000444508 SPCS2Q15005 226 aa13.89□□□□□ -0.19
SMARCAL1-209ENST00000444508 HOGA1Q86XE5 327 aa13.89□□□□□ -0.19
SMARCAL1-209ENST00000444508 H1FOOQ8IZA3 346 aaPredicted RBP13.89□□□□□ -0.19
SMARCAL1-209ENST00000444508 C5orf56Q8N8D9 126 aa13.89□□□□□ -0.19
SMARCAL1-209ENST00000444508 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.89□□□□□ -0.19
SMARCAL1-209ENST00000444508 OR8U1Q8NH10 309 aa13.89□□□□□ -0.19
SMARCAL1-209ENST00000444508 SGMS2Q8NHU3 365 aa13.89□□□□□ -0.19
SMARCAL1-209ENST00000444508 OR2D2Q9H210 308 aa13.89□□□□□ -0.19
SMARCAL1-209ENST00000444508 OR5H14A6NHG9 310 aa13.88□□□□□ -0.19
SMARCAL1-209ENST00000444508 HPGDSO60760 199 aa13.88□□□□□ -0.19
SMARCAL1-209ENST00000444508 CT45A6P0DMU7 189 aa13.88□□□□□ -0.19
SMARCAL1-209ENST00000444508 CT45A5P0DMU8 189 aa13.88□□□□□ -0.19
SMARCAL1-209ENST00000444508 CT45A7P0DMV0 189 aa13.88□□□□□ -0.19
SMARCAL1-209ENST00000444508 PTHLHP12272 177 aa13.88□□□□□ -0.19
SMARCAL1-209ENST00000444508 TMEM95Q3KNT9 176 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms