RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 ABCA11PQ4W5N1 156 aa8.27□□□□□ -1.09
HLA-DQB1-206ENST00000443574 C9orf152Q5JTZ5 239 aa8.27□□□□□ -1.09
HLA-DQB1-206ENST00000443574 ZNF833PQ6ZTB9 187 aa8.27□□□□□ -1.09
HLA-DQB1-206ENST00000443574 AP3S1Q92572 193 aa8.27□□□□□ -1.09
HLA-DQB1-206ENST00000443574 SLC25A46Q96AG3 418 aa8.27□□□□□ -1.09
HLA-DQB1-206ENST00000443574 S100A16Q96FQ6 103 aaKnown RBP8.27□□□□□ -1.09
HLA-DQB1-206ENST00000443574 CITED1Q99966 193 aa8.27□□□□□ -1.09
HLA-DQB1-206ENST00000443574 CABLES2Q9BTV7 478 aa8.27□□□□□ -1.09
HLA-DQB1-206ENST00000443574 DCSTAMPQ9H295 470 aa8.27□□□□□ -1.09
HLA-DQB1-206ENST00000443574 IFI27L2Q9H2X8 130 aa8.27□□□□□ -1.09
HLA-DQB1-206ENST00000443574 ZNF221Q9UK13 617 aa8.27□□□□□ -1.09
HLA-DQB1-206ENST00000443574 KCNK7Q9Y2U2 307 aa8.27□□□□□ -1.09
HLA-DQB1-206ENST00000443574 IGHV3-72A0A0B4J1Y9 119 aa8.26□□□□□ -1.09
HLA-DQB1-206ENST00000443574 TMEM235A6NFC5 223 aa8.26□□□□□ -1.09
HLA-DQB1-206ENST00000443574 OR5H14A6NHG9 310 aa8.26□□□□□ -1.09
HLA-DQB1-206ENST00000443574 NCBP2LA6PVI3 153 aaKnown RBP8.26□□□□□ -1.09
HLA-DQB1-206ENST00000443574 GABARAPO95166 117 aa8.26□□□□□ -1.09
HLA-DQB1-206ENST00000443574 SCTP09683 121 aa8.26□□□□□ -1.09
HLA-DQB1-206ENST00000443574 CTXN2P0C2S0 81 aa8.26□□□□□ -1.09
HLA-DQB1-206ENST00000443574 GPR12P47775 334 aa8.26□□□□□ -1.09
HLA-DQB1-206ENST00000443574 NCS1P62166 190 aa8.26□□□□□ -1.09
HLA-DQB1-206ENST00000443574 EBI3Q14213 229 aa8.26□□□□□ -1.09
HLA-DQB1-206ENST00000443574 HNF4GQ14541 408 aa8.26□□□□□ -1.09
HLA-DQB1-206ENST00000443574 Q6ZPA2 131 aa8.26□□□□□ -1.09
HLA-DQB1-206ENST00000443574 Q6ZS49 121 aa8.26□□□□□ -1.09
HLA-DQB1-206ENST00000443574 FOXRED2Q8IWF2 684 aa8.26□□□□□ -1.09
HLA-DQB1-206ENST00000443574 SAMD12Q8N8I0 201 aa8.26□□□□□ -1.09
HLA-DQB1-206ENST00000443574 ACOT12Q8WYK0 555 aa8.26□□□□□ -1.09
HLA-DQB1-206ENST00000443574 SLC25A38Q96DW6 304 aa8.26□□□□□ -1.09
HLA-DQB1-206ENST00000443574 CYYR1Q96J86 154 aa8.26□□□□□ -1.09
HLA-DQB1-206ENST00000443574 EAF1Q96JC9 268 aaPredicted RBP8.26□□□□□ -1.09
HLA-DQB1-206ENST00000443574 LIN7CQ9NUP9 197 aaKnown RBP8.26□□□□□ -1.09
HLA-DQB1-206ENST00000443574 RDH8Q9NYR8 311 aa8.26□□□□□ -1.09
HLA-DQB1-206ENST00000443574 OR1A1Q9P1Q5 309 aa8.26□□□□□ -1.09
HLA-DQB1-206ENST00000443574 SIGLEC9Q9Y336 463 aa8.26□□□□□ -1.09
HLA-DQB1-206ENST00000443574 RBM7Q9Y580 266 aaKnown RBP8.26□□□□□ -1.09
HLA-DQB1-206ENST00000443574 FBN3Q75N90 2809 aa8.26□□□□□ -1.09
HLA-DQB1-206ENST00000443574 TRAV18A0A075B6X5 111 aa8.25□□□□□ -1.09
HLA-DQB1-206ENST00000443574 KCNAB3O43448 404 aa8.25□□□□□ -1.09
HLA-DQB1-206ENST00000443574 FBXO24O75426 580 aa8.25□□□□□ -1.09
HLA-DQB1-206ENST00000443574 APOA2P02652 100 aa8.25□□□□□ -1.09
HLA-DQB1-206ENST00000443574 MC5RP33032 325 aa8.25□□□□□ -1.09
HLA-DQB1-206ENST00000443574 TGFBR1P36897 503 aa8.25□□□□□ -1.09
HLA-DQB1-206ENST00000443574 RPS19P39019 145 aaKnown RBP8.25□□□□□ -1.09
HLA-DQB1-206ENST00000443574 CBX5P45973 191 aa8.25□□□□□ -1.09
HLA-DQB1-206ENST00000443574 ARPC4P59998 168 aa8.25□□□□□ -1.09
HLA-DQB1-206ENST00000443574 VBP1P61758 197 aa8.25□□□□□ -1.09
HLA-DQB1-206ENST00000443574 BLCAPP62952 87 aa8.25□□□□□ -1.09
HLA-DQB1-206ENST00000443574 CBX3Q13185 183 aa8.25□□□□□ -1.09
HLA-DQB1-206ENST00000443574 MMDQ15546 238 aa8.25□□□□□ -1.09
HLA-DQB1-206ENST00000443574 ZNF260Q3ZCT1 412 aa8.25□□□□□ -1.09
HLA-DQB1-206ENST00000443574 PRR31Q5SQ13 230 aa8.25□□□□□ -1.09
HLA-DQB1-206ENST00000443574 TMEM69Q5SWH9 247 aa8.25□□□□□ -1.09
HLA-DQB1-206ENST00000443574 FAM53AQ6NSI3 398 aaPredicted RBP8.25□□□□□ -1.09
HLA-DQB1-206ENST00000443574 MZT2AQ6P582 158 aa8.25□□□□□ -1.09
HLA-DQB1-206ENST00000443574 ANKRD13BQ86YJ7 626 aa8.25□□□□□ -1.09
HLA-DQB1-206ENST00000443574 ODF3L1Q8IXM7 274 aa8.25□□□□□ -1.09
HLA-DQB1-206ENST00000443574 C5orf56Q8N8D9 126 aa8.25□□□□□ -1.09
HLA-DQB1-206ENST00000443574 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.25□□□□□ -1.09
HLA-DQB1-206ENST00000443574 OR4X2Q8NGF9 303 aa8.25□□□□□ -1.09
HLA-DQB1-206ENST00000443574 OR5H6Q8NGV6 325 aa8.25□□□□□ -1.09
HLA-DQB1-206ENST00000443574 NUDCD2Q8WVJ2 157 aa8.25□□□□□ -1.09
HLA-DQB1-206ENST00000443574 MAFIPQ8WZ33 124 aa8.25□□□□□ -1.09
HLA-DQB1-206ENST00000443574 RASL11BQ9BPW5 248 aa8.25□□□□□ -1.09
HLA-DQB1-206ENST00000443574 MRPL20Q9BYC9 149 aaKnown RBP8.25□□□□□ -1.09
HLA-DQB1-206ENST00000443574 C11orf54Q9H0W9 315 aaPredicted RBP8.25□□□□□ -1.09
HLA-DQB1-206ENST00000443574 ABCG5Q9H222 651 aa8.25□□□□□ -1.09
HLA-DQB1-206ENST00000443574 SERTAD4Q9NUC0 356 aa8.25□□□□□ -1.09
HLA-DQB1-206ENST00000443574 KIAA1456Q9P272 454 aa8.25□□□□□ -1.09
HLA-DQB1-206ENST00000443574 ZNF230Q9UIE0 474 aaPredicted RBP8.25□□□□□ -1.09
HLA-DQB1-206ENST00000443574 TRBV6-7A0A0A0MS04 114 aa8.24□□□□□ -1.09
HLA-DQB1-206ENST00000443574 SMIM31A0A1B0GVY4 71 aa8.24□□□□□ -1.09
HLA-DQB1-206ENST00000443574 H7C2Y5 167 aa8.24□□□□□ -1.09
HLA-DQB1-206ENST00000443574 RBBP9O75884 186 aa8.24□□□□□ -1.09
HLA-DQB1-206ENST00000443574 GSTT2P0CG29 244 aa8.24□□□□□ -1.09
HLA-DQB1-206ENST00000443574 GSTT2BP0CG30 244 aa8.24□□□□□ -1.09
HLA-DQB1-206ENST00000443574 SOX6P35712 828 aa8.24□□□□□ -1.09
HLA-DQB1-206ENST00000443574 OR3A3P47888 321 aa8.24□□□□□ -1.09
HLA-DQB1-206ENST00000443574 RORCP51449 518 aa8.24□□□□□ -1.09
HLA-DQB1-206ENST00000443574 IGSF11Q5DX21 431 aa8.24□□□□□ -1.09
HLA-DQB1-206ENST00000443574 GPR107Q5VW38 600 aa8.24□□□□□ -1.09
HLA-DQB1-206ENST00000443574 C5orf24Q7Z6I8 188 aa8.24□□□□□ -1.09
HLA-DQB1-206ENST00000443574 SLC35E3Q7Z769 313 aa8.24□□□□□ -1.09
HLA-DQB1-206ENST00000443574 Q8N6K4 173 aa8.24□□□□□ -1.09
HLA-DQB1-206ENST00000443574 RAB2BQ8WUD1 216 aa8.24□□□□□ -1.09
HLA-DQB1-206ENST00000443574 ABHD14BQ96IU4 210 aa8.24□□□□□ -1.09
HLA-DQB1-206ENST00000443574 CMTM3Q96MX0 182 aa8.24□□□□□ -1.09
HLA-DQB1-206ENST00000443574 NABP2Q9BQ15 211 aa8.24□□□□□ -1.09
HLA-DQB1-206ENST00000443574 BCL7BQ9BQE9 202 aa8.24□□□□□ -1.09
HLA-DQB1-206ENST00000443574 ZNF251Q9BRH9 671 aa8.24□□□□□ -1.09
HLA-DQB1-206ENST00000443574 ST6GALNAC5Q9BVH7 336 aa8.24□□□□□ -1.09
HLA-DQB1-206ENST00000443574 GON7Q9BXV9 100 aa8.24□□□□□ -1.09
HLA-DQB1-206ENST00000443574 TOLLIPQ9H0E2 274 aa8.24□□□□□ -1.09
HLA-DQB1-206ENST00000443574 OR2D2Q9H210 308 aa8.24□□□□□ -1.09
HLA-DQB1-206ENST00000443574 IFT46Q9NQC8 304 aa8.24□□□□□ -1.09
HLA-DQB1-206ENST00000443574 WASHC3Q9Y3C0 194 aa8.24□□□□□ -1.09
HLA-DQB1-206ENST00000443574 NBEAL1Q6ZS30 2694 aa8.23□□□□□ -1.09
HLA-DQB1-206ENST00000443574 IGKV1-6A0A0C4DH72 117 aa8.23□□□□□ -1.09
HLA-DQB1-206ENST00000443574 XRCC3O43542 346 aa8.23□□□□□ -1.09
HLA-DQB1-206ENST00000443574 APOA1P02647 267 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms