RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 TM2D1Q9BX74 207 aa9.19□□□□□ -0.94
TTC28-203ENST00000442232 IFI27L2Q9H2X8 130 aa9.19□□□□□ -0.94
TTC28-203ENST00000442232 RNF150Q9ULK6 438 aa9.19□□□□□ -0.94
TTC28-203ENST00000442232 ZNF256Q9Y2P7 627 aaPredicted RBP9.19□□□□□ -0.94
TTC28-203ENST00000442232 IGHV7-81A0A0B4J1V7 117 aa9.18□□□□□ -0.94
TTC28-203ENST00000442232 A0A1W2PN81 502 aa9.18□□□□□ -0.94
TTC28-203ENST00000442232 G3V318 75 aa9.18□□□□□ -0.94
TTC28-203ENST00000442232 CASQ2O14958 399 aaPredicted RBP9.18□□□□□ -0.94
TTC28-203ENST00000442232 SLC22A1O15245 554 aa9.18□□□□□ -0.94
TTC28-203ENST00000442232 RBBP9O75884 186 aa9.18□□□□□ -0.94
TTC28-203ENST00000442232 NDUFA3O95167 84 aa9.18□□□□□ -0.94
TTC28-203ENST00000442232 CD40LGP29965 261 aa9.18□□□□□ -0.94
TTC28-203ENST00000442232 PPIFP30405 207 aaKnown RBP9.18□□□□□ -0.94
TTC28-203ENST00000442232 MC5RP33032 325 aa9.18□□□□□ -0.94
TTC28-203ENST00000442232 CHRNA7P36544 502 aa9.18□□□□□ -0.94
TTC28-203ENST00000442232 MRPS15P82914 257 aaKnown RBP9.18□□□□□ -0.94
TTC28-203ENST00000442232 RUNX1Q01196 453 aa9.18□□□□□ -0.94
TTC28-203ENST00000442232 TMEM267Q0VDI3 215 aaPredicted RBP9.18□□□□□ -0.94
TTC28-203ENST00000442232 INSL4Q14641 139 aa9.18□□□□□ -0.94
TTC28-203ENST00000442232 TRAM1Q15629 374 aa9.18□□□□□ -0.94
TTC28-203ENST00000442232 LAIR2Q6ISS4 152 aa9.18□□□□□ -0.94
TTC28-203ENST00000442232 TCTEX1D1Q8N7M0 179 aa9.18□□□□□ -0.94
TTC28-203ENST00000442232 NPBQ8NG41 125 aa9.18□□□□□ -0.94
TTC28-203ENST00000442232 MYOZ3Q8TDC0 251 aa9.18□□□□□ -0.94
TTC28-203ENST00000442232 RBMXL1Q96E39 390 aaKnown RBP9.18□□□□□ -0.94
TTC28-203ENST00000442232 GHITMQ9H3K2 345 aa9.18□□□□□ -0.94
TTC28-203ENST00000442232 GNB4Q9HAV0 340 aa9.18□□□□□ -0.94
TTC28-203ENST00000442232 SLC23A1Q9UHI7 598 aa9.18□□□□□ -0.94
TTC28-203ENST00000442232 FOXA2Q9Y261 457 aaPredicted RBP9.18□□□□□ -0.94
TTC28-203ENST00000442232 WASHC3Q9Y3C0 194 aa9.18□□□□□ -0.94
TTC28-203ENST00000442232 TPRKBQ9Y3C4 175 aa9.18□□□□□ -0.94
TTC28-203ENST00000442232 A3GALT2U3KPV4 340 aa9.18□□□□□ -0.94
TTC28-203ENST00000442232 RRHO14718 337 aa9.17□□□□□ -0.94
TTC28-203ENST00000442232 OVOL1O14753 267 aa9.17□□□□□ -0.94
TTC28-203ENST00000442232 ARL6IP5O75915 188 aa9.17□□□□□ -0.94
TTC28-203ENST00000442232 NAPSAO96009 420 aa9.17□□□□□ -0.94
TTC28-203ENST00000442232 IGLV1-40P01703 118 aa9.17□□□□□ -0.94
TTC28-203ENST00000442232 APOA2P02652 100 aa9.17□□□□□ -0.94
TTC28-203ENST00000442232 UCHL1P09936 223 aa9.17□□□□□ -0.94
TTC28-203ENST00000442232 HSMCR30P0CW71 290 aa9.17□□□□□ -0.94
TTC28-203ENST00000442232 ARSBP15848 533 aa9.17□□□□□ -0.94
TTC28-203ENST00000442232 ZBTB25P24278 435 aa9.17□□□□□ -0.94
TTC28-203ENST00000442232 RAB9AP51151 201 aa9.17□□□□□ -0.94
TTC28-203ENST00000442232 HLA-DRB3P79483 266 aa9.17□□□□□ -0.94
TTC28-203ENST00000442232 UNC119Q13432 240 aa9.17□□□□□ -0.94
TTC28-203ENST00000442232 RPL39P5Q59GN2 51 aa9.17□□□□□ -0.94
TTC28-203ENST00000442232 LIPKQ5VXJ0 399 aa9.17□□□□□ -0.94
TTC28-203ENST00000442232 ZNF660Q6AZW8 331 aaPredicted RBP9.17□□□□□ -0.94
TTC28-203ENST00000442232 PYHIN1Q6K0P9 492 aa9.17□□□□□ -0.94
TTC28-203ENST00000442232 C5orf24Q7Z6I8 188 aa9.17□□□□□ -0.94
TTC28-203ENST00000442232 ZNF429Q86V71 674 aa9.17□□□□□ -0.94
TTC28-203ENST00000442232 KLK15Q9H2R5 256 aa9.17□□□□□ -0.94
TTC28-203ENST00000442232 KCNK15Q9H427 330 aa9.17□□□□□ -0.94
TTC28-203ENST00000442232 FBXL15Q9H469 300 aa9.17□□□□□ -0.94
TTC28-203ENST00000442232 ISYNA1Q9NPH2 558 aa9.17□□□□□ -0.94
TTC28-203ENST00000442232 C12orf4Q9NQ89 552 aa9.17□□□□□ -0.94
TTC28-203ENST00000442232 ZNF221Q9UK13 617 aa9.17□□□□□ -0.94
TTC28-203ENST00000442232 U3KQK5 164 aa9.17□□□□□ -0.94
TTC28-203ENST00000442232 ERICH4A6NGS2 130 aa9.16□□□□□ -0.94
TTC28-203ENST00000442232 TMEM14DPA8MWL7 114 aa9.16□□□□□ -0.94
TTC28-203ENST00000442232 LINC01619G3V211 115 aa9.16□□□□□ -0.94
TTC28-203ENST00000442232 I3L521 148 aa9.16□□□□□ -0.94
TTC28-203ENST00000442232 ITGB1BP1O14713 200 aa9.16□□□□□ -0.94
TTC28-203ENST00000442232 SAP30O75446 220 aa9.16□□□□□ -0.94
TTC28-203ENST00000442232 CPEP16870 476 aa9.16□□□□□ -0.94
TTC28-203ENST00000442232 PSMA1P25786 263 aaKnown RBP9.16□□□□□ -0.94
TTC28-203ENST00000442232 GNB1P62873 340 aa9.16□□□□□ -0.94
TTC28-203ENST00000442232 P2RY14Q15391 338 aa9.16□□□□□ -0.94
TTC28-203ENST00000442232 RAB11BQ15907 218 aa9.16□□□□□ -0.94
TTC28-203ENST00000442232 ZNF880Q6PDB4 577 aa9.16□□□□□ -0.94
TTC28-203ENST00000442232 GLDNQ6ZMI3 551 aaPredicted RBP9.16□□□□□ -0.94
TTC28-203ENST00000442232 MINDY2Q8NBR6 621 aa9.16□□□□□ -0.94
TTC28-203ENST00000442232 ABHD14BQ96IU4 210 aa9.16□□□□□ -0.94
TTC28-203ENST00000442232 CYYR1Q96J86 154 aa9.16□□□□□ -0.94
TTC28-203ENST00000442232 RITA1Q96K30 269 aa9.16□□□□□ -0.94
TTC28-203ENST00000442232 AK3Q9UIJ7 227 aa9.16□□□□□ -0.94
TTC28-203ENST00000442232 LSM2Q9Y333 95 aaKnown RBP9.16□□□□□ -0.94
TTC28-203ENST00000442232 TENM3Q9P273 2699 aa9.16□□□□□ -0.94
TTC28-203ENST00000442232 SORL1Q92673 2214 aa9.15□□□□□ -0.94
TTC28-203ENST00000442232 TRBV6-6A0A0A6YYG2 114 aa9.15□□□□□ -0.94
TTC28-203ENST00000442232 H0YJW9 148 aa9.15□□□□□ -0.94
TTC28-203ENST00000442232 SLC17A2O00624 439 aa9.15□□□□□ -0.94
TTC28-203ENST00000442232 RGS10O43665 173 aa9.15□□□□□ -0.94
TTC28-203ENST00000442232 LGALS1P09382 135 aaKnown RBP9.15□□□□□ -0.94
TTC28-203ENST00000442232 CT45A6P0DMU7 189 aa9.15□□□□□ -0.94
TTC28-203ENST00000442232 CT45A5P0DMU8 189 aa9.15□□□□□ -0.94
TTC28-203ENST00000442232 CT45A7P0DMV0 189 aa9.15□□□□□ -0.94
TTC28-203ENST00000442232 CEACAM6P40199 344 aa9.15□□□□□ -0.94
TTC28-203ENST00000442232 CX3CL1P78423 397 aa9.15□□□□□ -0.94
TTC28-203ENST00000442232 QRFPP83859 136 aa9.15□□□□□ -0.94
TTC28-203ENST00000442232 NDPQ00604 133 aa9.15□□□□□ -0.94
TTC28-203ENST00000442232 CBX3Q13185 183 aa9.15□□□□□ -0.94
TTC28-203ENST00000442232 ACTBL2Q562R1 376 aa9.15□□□□□ -0.94
TTC28-203ENST00000442232 PPP1R27Q86WC6 154 aa9.15□□□□□ -0.94
TTC28-203ENST00000442232 OR56B1Q8NGI3 324 aa9.15□□□□□ -0.94
TTC28-203ENST00000442232 TMEM203Q969S6 136 aa9.15□□□□□ -0.94
TTC28-203ENST00000442232 CLCC1Q96S66 551 aa9.15□□□□□ -0.94
TTC28-203ENST00000442232 TSNAXQ99598 290 aaKnown RBP9.15□□□□□ -0.94
TTC28-203ENST00000442232 RNF5Q99942 180 aa9.15□□□□□ -0.94
TTC28-203ENST00000442232 CMSS1Q9BQ75 279 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms