RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 IFI27L2Q9H2X8 130 aa15.63■□□□□ 0.09
SHROOM1-204ENST00000440118 HSF4Q9ULV5 492 aa15.63■□□□□ 0.09
SHROOM1-204ENST00000440118 NBR2O15453 112 aa15.62■□□□□ 0.09
SHROOM1-204ENST00000440118 CD37P11049 281 aa15.62■□□□□ 0.09
SHROOM1-204ENST00000440118 ZBTB25P24278 435 aa15.62■□□□□ 0.09
SHROOM1-204ENST00000440118 THBS3P49746 956 aa15.62■□□□□ 0.09
SHROOM1-204ENST00000440118 FAM71F2Q6NXP2 309 aa15.62■□□□□ 0.09
SHROOM1-204ENST00000440118 ZNF880Q6PDB4 577 aa15.62■□□□□ 0.09
SHROOM1-204ENST00000440118 Q6ZPA2 131 aa15.62■□□□□ 0.09
SHROOM1-204ENST00000440118 C18orf65Q6ZTR6 163 aa15.62■□□□□ 0.09
SHROOM1-204ENST00000440118 MRPL41Q8IXM3 137 aaKnown RBP15.62■□□□□ 0.09
SHROOM1-204ENST00000440118 PARP11Q9NR21 331 aa15.62■□□□□ 0.09
SHROOM1-204ENST00000440118 NDUFB11Q9NX14 153 aa15.62■□□□□ 0.09
SHROOM1-204ENST00000440118 H7C2Y5 167 aa15.61■□□□□ 0.09
SHROOM1-204ENST00000440118 RPLP1P05386 114 aaKnown RBP15.61■□□□□ 0.09
SHROOM1-204ENST00000440118 MYCNOSP40205 109 aa15.61■□□□□ 0.09
SHROOM1-204ENST00000440118 GABARAPL2P60520 117 aa15.61■□□□□ 0.09
SHROOM1-204ENST00000440118 FOXE3Q13461 319 aa15.61■□□□□ 0.09
SHROOM1-204ENST00000440118 PLGLAQ15195 96 aa15.61■□□□□ 0.09
SHROOM1-204ENST00000440118 C2orf76Q3KRA6 126 aa15.61■□□□□ 0.09
SHROOM1-204ENST00000440118 FAM131AQ6UXB0 335 aa15.61■□□□□ 0.09
SHROOM1-204ENST00000440118 FAM89BQ8N5H3 189 aa15.61■□□□□ 0.09
SHROOM1-204ENST00000440118 MCRIP2Q9BUT9 160 aaKnown RBP15.61■□□□□ 0.09
SHROOM1-204ENST00000440118 PECRQ9BY49 303 aa15.61■□□□□ 0.09
SHROOM1-204ENST00000440118 TRBV6-6A0A0A6YYG2 114 aa15.6■□□□□ 0.09
SHROOM1-204ENST00000440118 TMEM272A0A1B0GTI8 110 aa15.6■□□□□ 0.09
SHROOM1-204ENST00000440118 ELANEP08246 267 aa15.6■□□□□ 0.09
SHROOM1-204ENST00000440118 CD3GP09693 182 aa15.6■□□□□ 0.09
SHROOM1-204ENST00000440118 GADD45AP24522 165 aa15.6■□□□□ 0.09
SHROOM1-204ENST00000440118 CEACAM6P40199 344 aa15.6■□□□□ 0.09
SHROOM1-204ENST00000440118 SSX1Q16384 188 aa15.6■□□□□ 0.09
SHROOM1-204ENST00000440118 RPL39P5Q59GN2 51 aa15.6■□□□□ 0.09
SHROOM1-204ENST00000440118 ETV3LQ6ZN32 361 aa15.6■□□□□ 0.09
SHROOM1-204ENST00000440118 LCNL1Q6ZST4 164 aa15.6■□□□□ 0.09
SHROOM1-204ENST00000440118 ABHD14BQ96IU4 210 aa15.6■□□□□ 0.09
SHROOM1-204ENST00000440118 DUX3Q96PT4 197 aa15.6■□□□□ 0.09
SHROOM1-204ENST00000440118 OR1A1Q9P1Q5 309 aa15.6■□□□□ 0.09
SHROOM1-204ENST00000440118 RAB22AQ9UL26 194 aa15.6■□□□□ 0.09
SHROOM1-204ENST00000440118 A0A075B6Q4 140 aa15.59■□□□□ 0.09
SHROOM1-204ENST00000440118 OR5H14A6NHG9 310 aa15.59■□□□□ 0.09
SHROOM1-204ENST00000440118 GSTP1P09211 210 aaKnown RBP15.59■□□□□ 0.09
SHROOM1-204ENST00000440118 CNTFRP26992 372 aa15.59■□□□□ 0.09
SHROOM1-204ENST00000440118 PSMB9P28065 219 aa15.59■□□□□ 0.09
SHROOM1-204ENST00000440118 OR10A3P58181 314 aa15.59■□□□□ 0.09
SHROOM1-204ENST00000440118 TMEM65Q6PI78 240 aa15.59■□□□□ 0.09
SHROOM1-204ENST00000440118 OR8U1Q8NH10 309 aa15.59■□□□□ 0.09
SHROOM1-204ENST00000440118 ABHD5Q8WTS1 349 aa15.59■□□□□ 0.09
SHROOM1-204ENST00000440118 RAB3CQ96E17 227 aa15.59■□□□□ 0.09
SHROOM1-204ENST00000440118 KCTD7Q96MP8 289 aa15.59■□□□□ 0.09
SHROOM1-204ENST00000440118 GHITMQ9H3K2 345 aa15.59■□□□□ 0.09
SHROOM1-204ENST00000440118 Q9N2K0 584 aa15.59■□□□□ 0.09
SHROOM1-204ENST00000440118 ZNF221Q9UK13 617 aa15.59■□□□□ 0.09
SHROOM1-204ENST00000440118 TRAV1-2A0A0B4J238 106 aa15.58■□□□□ 0.08
SHROOM1-204ENST00000440118 HLA-DRB1P01911 266 aa15.58■□□□□ 0.08
SHROOM1-204ENST00000440118 SCTP09683 121 aa15.58■□□□□ 0.08
SHROOM1-204ENST00000440118 RAB3BP20337 219 aa15.58■□□□□ 0.08
SHROOM1-204ENST00000440118 HOXD3P31249 432 aaPredicted RBP15.58■□□□□ 0.08
SHROOM1-204ENST00000440118 C5orf64Q2M2E5 130 aa15.58■□□□□ 0.08
SHROOM1-204ENST00000440118 DEFB136Q30KP8 78 aa15.58■□□□□ 0.08
SHROOM1-204ENST00000440118 C22orf42Q6IC83 251 aa15.58■□□□□ 0.08
SHROOM1-204ENST00000440118 GLDNQ6ZMI3 551 aaPredicted RBP15.58■□□□□ 0.08
SHROOM1-204ENST00000440118 PARP12Q9H0J9 701 aaKnown RBP15.58■□□□□ 0.08
SHROOM1-204ENST00000440118 WASHC3Q9Y3C0 194 aa15.58■□□□□ 0.08
SHROOM1-204ENST00000440118 WSB1Q9Y6I7 421 aa15.58■□□□□ 0.08
SHROOM1-204ENST00000440118 TRDV1A0A1B0GX56 115 aa15.57■□□□□ 0.08
SHROOM1-204ENST00000440118 IFITM5A6NNB3 132 aa15.57■□□□□ 0.08
SHROOM1-204ENST00000440118 FOXI3A8MTJ6 420 aaPredicted RBP15.57■□□□□ 0.08
SHROOM1-204ENST00000440118 TRDCB7Z8K6 153 aa15.57■□□□□ 0.08
SHROOM1-204ENST00000440118 CCL24O00175 119 aa15.57■□□□□ 0.08
SHROOM1-204ENST00000440118 ATP6V0E1O15342 81 aa15.57■□□□□ 0.08
SHROOM1-204ENST00000440118 MRPS14O60783 128 aaKnown RBP15.57■□□□□ 0.08
SHROOM1-204ENST00000440118 IGF1P05019 195 aa15.57■□□□□ 0.08
SHROOM1-204ENST00000440118 MC5RP33032 325 aa15.57■□□□□ 0.08
SHROOM1-204ENST00000440118 PLAC9Q5JTB6 97 aa15.57■□□□□ 0.08
SHROOM1-204ENST00000440118 LIN54Q6MZP7 749 aa15.57■□□□□ 0.08
SHROOM1-204ENST00000440118 RITA1Q96K30 269 aa15.57■□□□□ 0.08
SHROOM1-204ENST00000440118 C11orf54Q9H0W9 315 aaPredicted RBP15.57■□□□□ 0.08
SHROOM1-204ENST00000440118 OR51J1Q9H342 316 aa15.57■□□□□ 0.08
SHROOM1-204ENST00000440118 RNF150Q9ULK6 438 aa15.57■□□□□ 0.08
SHROOM1-204ENST00000440118 METTL21EPA6NDL7 271 aa15.56■□□□□ 0.08
SHROOM1-204ENST00000440118 ITGB1BP1O14713 200 aa15.56■□□□□ 0.08
SHROOM1-204ENST00000440118 IGHG4P01861 327 aa15.56■□□□□ 0.08
SHROOM1-204ENST00000440118 TMEM50BP56557 158 aa15.56■□□□□ 0.08
SHROOM1-204ENST00000440118 KIR2DS1Q14954 304 aa15.56■□□□□ 0.08
SHROOM1-204ENST00000440118 ECSCRQ19T08 205 aa15.56■□□□□ 0.08
SHROOM1-204ENST00000440118 FCGR1BQ92637 280 aa15.56■□□□□ 0.08
SHROOM1-204ENST00000440118 RAX2Q96IS3 184 aa15.56■□□□□ 0.08
SHROOM1-204ENST00000440118 CHCHD6Q9BRQ6 235 aa15.56■□□□□ 0.08
SHROOM1-204ENST00000440118 ZNF580Q9UK33 172 aa15.56■□□□□ 0.08
SHROOM1-204ENST00000440118 TRAV41A0A0B4J266 112 aa15.55■□□□□ 0.08
SHROOM1-204ENST00000440118 BET1O15155 118 aa15.55■□□□□ 0.08
SHROOM1-204ENST00000440118 LDLRAD4O15165 306 aa15.55■□□□□ 0.08
SHROOM1-204ENST00000440118 FABP7O15540 132 aa15.55■□□□□ 0.08
SHROOM1-204ENST00000440118 RBBP9O75884 186 aa15.55■□□□□ 0.08
SHROOM1-204ENST00000440118 TNFAIP8O95379 198 aa15.55■□□□□ 0.08
SHROOM1-204ENST00000440118 APOA2P02652 100 aa15.55■□□□□ 0.08
SHROOM1-204ENST00000440118 CT45A6P0DMU7 189 aa15.55■□□□□ 0.08
SHROOM1-204ENST00000440118 CT45A5P0DMU8 189 aa15.55■□□□□ 0.08
SHROOM1-204ENST00000440118 CT45A7P0DMV0 189 aa15.55■□□□□ 0.08
SHROOM1-204ENST00000440118 TALDO1P37837 337 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms