RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 NUP210LQ5VU65 1888 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 IGKV3D-15A0A087WSY6 115 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 IGHV3-35A0A0C4DH35 117 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 CORTO00230 105 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 RAMP1O60894 148 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 IGKV3-15P01624 115 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 HBZP02008 142 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 MYOD1P15172 320 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 RAB5AP20339 215 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 GATA3P23771 443 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 P2RX3P56373 397 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 PAX5Q02548 391 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 SMAGPQ0VAQ4 97 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 LRRC75BQ2VPJ9 315 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 ZNF525Q8N782 197 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 FAM216BQ8N7L0 139 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 ZNRF4Q8WWF5 429 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 REG4Q9BYZ8 158 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 MRPL37Q9BZE1 423 aaKnown RBP6.17□□□□□ -1.42
CNOT4-206ENST00000428680 WDR61Q9GZS3 305 aaKnown RBP6.17□□□□□ -1.42
CNOT4-206ENST00000428680 ZNF696Q9H7X3 374 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 CLEC2LP0C7M8 214 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 SP6Q3SY56 376 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 FAM201AQ5SY85 155 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 ZBTB34Q8NCN2 500 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 OR52I2Q8NH67 350 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 BTF3L4Q96K17 158 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 PKIBQ9C010 78 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 GABARAPL1Q9H0R8 117 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 LRRK1Q38SD2 2015 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 GTF3C1Q12789 2109 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 POLQO75417 2590 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 I3L521 148 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 OR2H2O95918 312 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 COMPP49747 757 aaPredicted RBP6.16□□□□□ -1.42
CNOT4-206ENST00000428680 RPL8P62917 257 aaKnown RBP6.16□□□□□ -1.42
CNOT4-206ENST00000428680 FAM3AP98173 230 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 HIST2H3PS2Q5TEC6 136 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 LCN15Q6UWW0 184 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 RNF141Q8WVD5 230 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 Q9N2K0 584 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 SPTBN4Q9H254 2564 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 A0A0U1RQV5 110 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 A0A1B0GU03 582 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 PSMB11A5LHX3 300 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 IGKV1D-33P01593 117 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 IGKV1-33P01594 117 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 IGKV3-20P01619 116 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 MSMBP08118 114 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 PTGDSP41222 190 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 MAGEB1P43366 347 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 MEF2CQ06413 473 aaPredicted RBP6.16□□□□□ -1.42
CNOT4-206ENST00000428680 KLF9Q13886 244 aaPredicted RBP6.16□□□□□ -1.42
CNOT4-206ENST00000428680 SRSF7Q16629 238 aaKnown RBP eCLIP6.16□□□□□ -1.42
CNOT4-206ENST00000428680 SLC25A47Q6Q0C1 308 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 HIST2H3AQ71DI3 136 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 RTN4RL2Q86UN3 420 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 SIAH3Q8IW03 269 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 OR52B4Q8NGK2 314 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 OR10Z1Q8NGY1 313 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 SCARB1Q8WTV0 552 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 SAMD10Q9BYL1 202 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 WNT5BQ9H1J7 359 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 HRH4Q9H3N8 390 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 RHOFQ9HBH0 211 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 ATPIF1Q9UII2 106 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 SLC45A2Q9UMX9 530 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 TMED3Q9Y3Q3 217 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 HELTA6NFD8 242 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 FXYD1O00168 92 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 CHATP28329 748 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 ZNF324BQ6AW86 544 aaPredicted RBP6.16□□□□□ -1.42
CNOT4-206ENST00000428680 AMMECR1LQ6DCA0 310 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 TMPRSS13Q9BYE2 586 aa6.16□□□□□ -1.42
CNOT4-206ENST00000428680 SIRT4Q9Y6E7 314 aaPredicted RBP6.16□□□□□ -1.42
CNOT4-206ENST00000428680 HIST1H1BP16401 226 aaKnown RBP6.15□□□□□ -1.42
CNOT4-206ENST00000428680 CRYGSP22914 178 aa6.15□□□□□ -1.42
CNOT4-206ENST00000428680 PIGYQ3MUY2 71 aa6.15□□□□□ -1.42
CNOT4-206ENST00000428680 TMEM78Q5T7P6 136 aa6.15□□□□□ -1.42
CNOT4-206ENST00000428680 ZNF767PQ75MW2 155 aa6.15□□□□□ -1.42
CNOT4-206ENST00000428680 ZNF439Q8NDP4 499 aa6.15□□□□□ -1.42
CNOT4-206ENST00000428680 TVP23CQ96ET8 276 aa6.15□□□□□ -1.42
CNOT4-206ENST00000428680 DERL3Q96Q80 235 aa6.15□□□□□ -1.42
CNOT4-206ENST00000428680 GABARAPL3Q9BY60 117 aa6.15□□□□□ -1.42
CNOT4-206ENST00000428680 FGF20Q9NP95 211 aaPredicted RBP6.15□□□□□ -1.42
CNOT4-206ENST00000428680 UFC1Q9Y3C8 167 aa6.15□□□□□ -1.42
CNOT4-206ENST00000428680 HEATR1Q9H583 2144 aaKnown RBP6.15□□□□□ -1.42
CNOT4-206ENST00000428680 CEACAM18A8MTB9 384 aa6.15□□□□□ -1.42
CNOT4-206ENST00000428680 SLC31A2O15432 143 aa6.15□□□□□ -1.42
CNOT4-206ENST00000428680 CD3DP04234 171 aa6.15□□□□□ -1.42
CNOT4-206ENST00000428680 CEBPDP49716 269 aaPredicted RBP6.15□□□□□ -1.42
CNOT4-206ENST00000428680 BRD3OSQ6XYD6 125 aa6.15□□□□□ -1.42
CNOT4-206ENST00000428680 GLDNQ6ZMI3 551 aaPredicted RBP6.15□□□□□ -1.42
CNOT4-206ENST00000428680 OR4A4PQ8NGN8 299 aa6.15□□□□□ -1.42
CNOT4-206ENST00000428680 CTHRC1Q96CG8 243 aa6.15□□□□□ -1.42
CNOT4-206ENST00000428680 LURAP1Q96LR2 239 aa6.15□□□□□ -1.42
CNOT4-206ENST00000428680 SEC22CQ9BRL7 303 aa6.15□□□□□ -1.42
CNOT4-206ENST00000428680 PLSCR4Q9NRQ2 329 aa6.15□□□□□ -1.42
CNOT4-206ENST00000428680 EPG5Q9HCE0 2579 aa6.15□□□□□ -1.43
CNOT4-206ENST00000428680 CENPVL1A0A0U1RR11 272 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms