RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 TOLLIPQ9H0E2 274 aa20.13■□□□□ 0.81
HERPUD2-205ENST00000427455 RDH8Q9NYR8 311 aa20.13■□□□□ 0.81
HERPUD2-205ENST00000427455 PIPOXQ9P0Z9 390 aa20.13■□□□□ 0.81
HERPUD2-205ENST00000427455 TRBV6-7A0A0A0MS04 114 aa20.12■□□□□ 0.81
HERPUD2-205ENST00000427455 APOA1P02647 267 aa20.12■□□□□ 0.81
HERPUD2-205ENST00000427455 HES1Q14469 280 aa20.12■□□□□ 0.81
HERPUD2-205ENST00000427455 TMEM69Q5SWH9 247 aa20.12■□□□□ 0.81
HERPUD2-205ENST00000427455 FAM71F2Q6NXP2 309 aa20.12■□□□□ 0.81
HERPUD2-205ENST00000427455 MZT2AQ6P582 158 aa20.12■□□□□ 0.81
HERPUD2-205ENST00000427455 ZNF833PQ6ZTB9 187 aa20.12■□□□□ 0.81
HERPUD2-205ENST00000427455 OR10J5Q8NHC4 309 aa20.12■□□□□ 0.81
HERPUD2-205ENST00000427455 ST6GALNAC5Q9BVH7 336 aa20.12■□□□□ 0.81
HERPUD2-205ENST00000427455 C11orf54Q9H0W9 315 aaPredicted RBP20.12■□□□□ 0.81
HERPUD2-205ENST00000427455 GHITMQ9H3K2 345 aa20.12■□□□□ 0.81
HERPUD2-205ENST00000427455 IGKV1D-8A0A087WSZ0 117 aa20.11■□□□□ 0.81
HERPUD2-205ENST00000427455 RAB29O14966 203 aa20.11■□□□□ 0.81
HERPUD2-205ENST00000427455 IGKV1D-33P01593 117 aa20.11■□□□□ 0.81
HERPUD2-205ENST00000427455 IGKV1-33P01594 117 aa20.11■□□□□ 0.81
HERPUD2-205ENST00000427455 EIF4EP06730 217 aaKnown RBP20.11■□□□□ 0.81
HERPUD2-205ENST00000427455 AGMATQ9BSE5 352 aa20.11■□□□□ 0.81
HERPUD2-205ENST00000427455 RNF114Q9Y508 228 aa20.11■□□□□ 0.81
HERPUD2-205ENST00000427455 IGHV3-72A0A0B4J1Y9 119 aa20.1■□□□□ 0.81
HERPUD2-205ENST00000427455 TMEM11P17152 192 aa20.1■□□□□ 0.81
HERPUD2-205ENST00000427455 CD1BP29016 333 aa20.1■□□□□ 0.81
HERPUD2-205ENST00000427455 SOX6P35712 828 aa20.1■□□□□ 0.81
HERPUD2-205ENST00000427455 OR3A3P47888 321 aa20.1■□□□□ 0.81
HERPUD2-205ENST00000427455 TAS2R20P59543 309 aa20.1■□□□□ 0.81
HERPUD2-205ENST00000427455 OR2T6Q8NHC8 308 aa20.1■□□□□ 0.81
HERPUD2-205ENST00000427455 ISOC1Q96CN7 298 aa20.1■□□□□ 0.81
HERPUD2-205ENST00000427455 GINS4Q9BRT9 223 aa20.1■□□□□ 0.81
HERPUD2-205ENST00000427455 ZNF747Q9BV97 191 aa20.1■□□□□ 0.81
HERPUD2-205ENST00000427455 ZNF702PQ9H963 129 aa20.1■□□□□ 0.81
HERPUD2-205ENST00000427455 M0QZK8 103 aa20.09■□□□□ 0.81
HERPUD2-205ENST00000427455 HPGDSO60760 199 aa20.09■□□□□ 0.81
HERPUD2-205ENST00000427455 EBI3Q14213 229 aa20.09■□□□□ 0.81
HERPUD2-205ENST00000427455 Q8N2B8 174 aa20.09■□□□□ 0.81
HERPUD2-205ENST00000427455 WFDC12Q8WWY7 111 aa20.09■□□□□ 0.81
HERPUD2-205ENST00000427455 ABHD14BQ96IU4 210 aa20.09■□□□□ 0.81
HERPUD2-205ENST00000427455 S1PR3Q99500 378 aa20.09■□□□□ 0.81
HERPUD2-205ENST00000427455 MRPL20Q9BYC9 149 aaKnown RBP20.09■□□□□ 0.81
HERPUD2-205ENST00000427455 PRSS22Q9GZN4 317 aa20.09■□□□□ 0.81
HERPUD2-205ENST00000427455 MOB4Q9Y3A3 225 aa20.09■□□□□ 0.81
HERPUD2-205ENST00000427455 H3BMQ9 156 aa20.08■□□□□ 0.81
HERPUD2-205ENST00000427455 CTXN2P0C2S0 81 aa20.08■□□□□ 0.81
HERPUD2-205ENST00000427455 CBX5P45973 191 aa20.08■□□□□ 0.81
HERPUD2-205ENST00000427455 PROK1P58294 105 aa20.08■□□□□ 0.81
HERPUD2-205ENST00000427455 LSAMPQ13449 338 aa20.08■□□□□ 0.81
HERPUD2-205ENST00000427455 OR2T10Q8NGZ9 312 aa20.08■□□□□ 0.81
HERPUD2-205ENST00000427455 ZNF251Q9BRH9 671 aa20.08■□□□□ 0.81
HERPUD2-205ENST00000427455 ANXA10Q9UJ72 324 aa20.08■□□□□ 0.81
HERPUD2-205ENST00000427455 SMIM31A0A1B0GVY4 71 aa20.07■□□□□ 0.8
HERPUD2-205ENST00000427455 PTHLHP12272 177 aa20.07■□□□□ 0.8
HERPUD2-205ENST00000427455 ELK1P19419 428 aa20.07■□□□□ 0.8
HERPUD2-205ENST00000427455 CNIH2Q6PI25 160 aa20.07■□□□□ 0.8
HERPUD2-205ENST00000427455 C11orf88Q6PI97 169 aa20.07■□□□□ 0.8
HERPUD2-205ENST00000427455 BEST4Q8NFU0 473 aa20.07■□□□□ 0.8
HERPUD2-205ENST00000427455 EAF1Q96JC9 268 aaPredicted RBP20.07■□□□□ 0.8
HERPUD2-205ENST00000427455 NABP2Q9BQ15 211 aa20.07■□□□□ 0.8
HERPUD2-205ENST00000427455 CCDC59Q9P031 241 aaKnown RBP20.07■□□□□ 0.8
HERPUD2-205ENST00000427455 ZNF221Q9UK13 617 aa20.07■□□□□ 0.8
HERPUD2-205ENST00000427455 ZNF736B4DX44 427 aaPredicted RBP20.06■□□□□ 0.8
HERPUD2-205ENST00000427455 MOSP00540 346 aa20.06■□□□□ 0.8
HERPUD2-205ENST00000427455 BLCAPP62952 87 aa20.06■□□□□ 0.8
HERPUD2-205ENST00000427455 HNF4GQ14541 408 aa20.06■□□□□ 0.8
HERPUD2-205ENST00000427455 RPL39P5Q59GN2 51 aa20.06■□□□□ 0.8
HERPUD2-205ENST00000427455 HOGA1Q86XE5 327 aa20.06■□□□□ 0.8
HERPUD2-205ENST00000427455 H1FOOQ8IZA3 346 aaPredicted RBP20.06■□□□□ 0.8
HERPUD2-205ENST00000427455 Q8N6K4 173 aa20.06■□□□□ 0.8
HERPUD2-205ENST00000427455 GVQW1Q8N7I0 195 aa20.06■□□□□ 0.8
HERPUD2-205ENST00000427455 DYNC2LI1Q8TCX1 351 aa20.06■□□□□ 0.8
HERPUD2-205ENST00000427455 SIGLEC9Q9Y336 463 aa20.06■□□□□ 0.8
HERPUD2-205ENST00000427455 CEPT1Q9Y6K0 416 aa20.06■□□□□ 0.8
HERPUD2-205ENST00000427455 GPR12P47775 334 aa20.05■□□□□ 0.8
HERPUD2-205ENST00000427455 SHISA2Q6UWI4 295 aa20.05■□□□□ 0.8
HERPUD2-205ENST00000427455 ZNF436-AS1Q8NC38 126 aaPredicted RBP20.05■□□□□ 0.8
HERPUD2-205ENST00000427455 RNF150Q9ULK6 438 aa20.05■□□□□ 0.8
HERPUD2-205ENST00000427455 FAM25AB3EWG3 89 aa20.04■□□□□ 0.8
HERPUD2-205ENST00000427455 FAM25CB3EWG5 89 aa20.04■□□□□ 0.8
HERPUD2-205ENST00000427455 FAM25GB3EWG6 89 aa20.04■□□□□ 0.8
HERPUD2-205ENST00000427455 FGF16O43320 207 aa20.04■□□□□ 0.8
HERPUD2-205ENST00000427455 AMY1AP04745 511 aa20.04■□□□□ 0.8
HERPUD2-205ENST00000427455 AMY2AP04746 511 aa20.04■□□□□ 0.8
HERPUD2-205ENST00000427455 OR8U9P0C7N5 309 aa20.04■□□□□ 0.8
HERPUD2-205ENST00000427455 ARPC4P59998 168 aa20.04■□□□□ 0.8
HERPUD2-205ENST00000427455 ABCA11PQ4W5N1 156 aa20.04■□□□□ 0.8
HERPUD2-205ENST00000427455 OR8U1Q8NH10 309 aa20.04■□□□□ 0.8
HERPUD2-205ENST00000427455 OR2D2Q9H210 308 aa20.04■□□□□ 0.8
HERPUD2-205ENST00000427455 IFT46Q9NQC8 304 aa20.04■□□□□ 0.8
HERPUD2-205ENST00000427455 HAX1O00165 279 aa20.03■□□□□ 0.8
HERPUD2-205ENST00000427455 HLA-DQB1P01920 261 aa20.03■□□□□ 0.8
HERPUD2-205ENST00000427455 PRSS3P35030 304 aa20.03■□□□□ 0.8
HERPUD2-205ENST00000427455 ARSJQ5FYB0 599 aaPredicted RBP20.03■□□□□ 0.8
HERPUD2-205ENST00000427455 C5orf56Q8N8D9 126 aa20.03■□□□□ 0.8
HERPUD2-205ENST00000427455 OR8H1Q8NGG4 311 aa20.03■□□□□ 0.8
HERPUD2-205ENST00000427455 MRPS7Q9Y2R9 242 aaKnown RBP20.03■□□□□ 0.8
HERPUD2-205ENST00000427455 RBM7Q9Y580 266 aaKnown RBP20.03■□□□□ 0.8
HERPUD2-205ENST00000427455 MEIS3P1A6NDR6 274 aa20.02■□□□□ 0.8
HERPUD2-205ENST00000427455 CCDC160A6NGH7 325 aa20.02■□□□□ 0.8
HERPUD2-205ENST00000427455 OR5H14A6NHG9 310 aa20.02■□□□□ 0.8
HERPUD2-205ENST00000427455 CT45A6P0DMU7 189 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms