RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 GNG12Q9UBI6 72 aa10□□□□□ -0.81
PTPRN-204ENST00000423636 POLDIP2Q9Y2S7 368 aa10□□□□□ -0.81
PTPRN-204ENST00000423636 HRNRQ86YZ3 2850 aaPredicted RBP10□□□□□ -0.81
PTPRN-204ENST00000423636 A0A1W2PPE2 198 aa9.99□□□□□ -0.81
PTPRN-204ENST00000423636 LINC00473A8K010 186 aa9.99□□□□□ -0.81
PTPRN-204ENST00000423636 RAC2P15153 192 aa9.99□□□□□ -0.81
PTPRN-204ENST00000423636 P2RY1P47900 373 aa9.99□□□□□ -0.81
PTPRN-204ENST00000423636 NAAAQ02083 359 aa9.99□□□□□ -0.81
PTPRN-204ENST00000423636 ASCL5Q7RTU5 278 aa9.99□□□□□ -0.81
PTPRN-204ENST00000423636 SPAG16Q8N0X2 631 aa9.99□□□□□ -0.81
PTPRN-204ENST00000423636 OR10Z1Q8NGY1 313 aa9.99□□□□□ -0.81
PTPRN-204ENST00000423636 MALRD1Q5VYJ5 2156 aa9.99□□□□□ -0.81
PTPRN-204ENST00000423636 UBE2L5PA0A1B0GUS4 154 aa9.99□□□□□ -0.81
PTPRN-204ENST00000423636 FAM87AP0C7U9 286 aa9.99□□□□□ -0.81
PTPRN-204ENST00000423636 UCP1P25874 307 aa9.99□□□□□ -0.81
PTPRN-204ENST00000423636 ZNF718Q3SXZ3 478 aa9.99□□□□□ -0.81
PTPRN-204ENST00000423636 RBMXL3Q8N7X1 1067 aaKnown RBP9.99□□□□□ -0.81
PTPRN-204ENST00000423636 OR5T1Q8NG75 326 aa9.99□□□□□ -0.81
PTPRN-204ENST00000423636 NINJ1Q92982 152 aa9.99□□□□□ -0.81
PTPRN-204ENST00000423636 GALMQ96C23 342 aa9.99□□□□□ -0.81
PTPRN-204ENST00000423636 PLK3Q9H4B4 646 aa9.99□□□□□ -0.81
PTPRN-204ENST00000423636 PSENENQ9NZ42 101 aa9.99□□□□□ -0.81
PTPRN-204ENST00000423636 KCNIP1Q9NZI2 227 aa9.99□□□□□ -0.81
PTPRN-204ENST00000423636 MLXQ9UH92 298 aa9.99□□□□□ -0.81
PTPRN-204ENST00000423636 hCG_1809904A0A1W2PP81 198 aa9.99□□□□□ -0.81
PTPRN-204ENST00000423636 A0A1W2PR64 198 aa9.99□□□□□ -0.81
PTPRN-204ENST00000423636 A0A1W2PRV1 198 aa9.99□□□□□ -0.81
PTPRN-204ENST00000423636 ACP7Q6ZNF0 438 aa9.99□□□□□ -0.81
PTPRN-204ENST00000423636 SSX7Q7RTT5 188 aa9.99□□□□□ -0.81
PTPRN-204ENST00000423636 TP53TG5Q9Y2B4 290 aa9.99□□□□□ -0.81
PTPRN-204ENST00000423636 NAV3Q8IVL0 2385 aa9.98□□□□□ -0.81
PTPRN-204ENST00000423636 IGKV3-15P01624 115 aa9.98□□□□□ -0.81
PTPRN-204ENST00000423636 IGHG3P01860 377 aa9.98□□□□□ -0.81
PTPRN-204ENST00000423636 UCP3P55916 312 aa9.98□□□□□ -0.81
PTPRN-204ENST00000423636 EIF5AL1Q6IS14 154 aaKnown RBP9.98□□□□□ -0.81
PTPRN-204ENST00000423636 ADAM5Q6NVV9 412 aa9.98□□□□□ -0.81
PTPRN-204ENST00000423636 INO80CQ6PI98 192 aaPredicted RBP9.98□□□□□ -0.81
PTPRN-204ENST00000423636 LILRB2Q8N423 598 aa9.98□□□□□ -0.81
PTPRN-204ENST00000423636 UBAC2Q8NBM4 344 aa9.98□□□□□ -0.81
PTPRN-204ENST00000423636 NEUROG1Q92886 237 aa9.98□□□□□ -0.81
PTPRN-204ENST00000423636 TMPRSS5Q9H3S3 457 aa9.98□□□□□ -0.81
PTPRN-204ENST00000423636 GNG13Q9P2W3 67 aa9.98□□□□□ -0.81
PTPRN-204ENST00000423636 SLC31A2O15432 143 aa9.98□□□□□ -0.81
PTPRN-204ENST00000423636 MDKP21741 143 aaPredicted RBP9.98□□□□□ -0.81
PTPRN-204ENST00000423636 ERVK11-1P61568 191 aa9.98□□□□□ -0.81
PTPRN-204ENST00000423636 EIF4E3Q8N5X7 224 aaKnown RBP9.98□□□□□ -0.81
PTPRN-204ENST00000423636 Q8NFD4 153 aa9.98□□□□□ -0.81
PTPRN-204ENST00000423636 IGFBPL1Q8WX77 278 aa9.98□□□□□ -0.81
PTPRN-204ENST00000423636 TMEM56Q96MV1 263 aa9.98□□□□□ -0.81
PTPRN-204ENST00000423636 TMEM56-RWDD3S4R434 201 aa9.98□□□□□ -0.81
PTPRN-204ENST00000423636 IQCF6A8MYZ5 107 aa9.97□□□□□ -0.81
PTPRN-204ENST00000423636 UMAD1C9J7I0 102 aa9.97□□□□□ -0.81
PTPRN-204ENST00000423636 ZG16O60844 167 aa9.97□□□□□ -0.81
PTPRN-204ENST00000423636 FCGR3BO75015 233 aa9.97□□□□□ -0.81
PTPRN-204ENST00000423636 PRDX2P32119 198 aa9.97□□□□□ -0.81
PTPRN-204ENST00000423636 AWAT1Q58HT5 328 aa9.97□□□□□ -0.81
PTPRN-204ENST00000423636 FAM24BQ8N5W8 94 aa9.97□□□□□ -0.81
PTPRN-204ENST00000423636 PLEKHF2Q9H8W4 249 aa9.97□□□□□ -0.81
PTPRN-204ENST00000423636 PLSCR2Q9NRY7 297 aa9.97□□□□□ -0.81
PTPRN-204ENST00000423636 AURKAIP1Q9NWT8 199 aaPredicted RBP9.97□□□□□ -0.81
PTPRN-204ENST00000423636 ATPIF1Q9UII2 106 aa9.97□□□□□ -0.81
PTPRN-204ENST00000423636 A0A1W2PPH5 198 aa9.97□□□□□ -0.81
PTPRN-204ENST00000423636 RAB19A4D1S5 217 aa9.97□□□□□ -0.81
PTPRN-204ENST00000423636 TAAR5O14804 337 aa9.97□□□□□ -0.81
PTPRN-204ENST00000423636 SNRPCP09234 159 aaKnown RBP9.97□□□□□ -0.81
PTPRN-204ENST00000423636 DANCRP0C864 163 aa9.97□□□□□ -0.81
PTPRN-204ENST00000423636 SPP1P10451 314 aa9.97□□□□□ -0.81
PTPRN-204ENST00000423636 SNCAP37840 140 aa9.97□□□□□ -0.81
PTPRN-204ENST00000423636 IL13RA2Q14627 380 aa9.97□□□□□ -0.81
PTPRN-204ENST00000423636 GPR157Q5UAW9 335 aa9.97□□□□□ -0.81
PTPRN-204ENST00000423636 C1orf229Q6ZS94 237 aaPredicted RBP9.97□□□□□ -0.81
PTPRN-204ENST00000423636 HAPLN4Q86UW8 402 aa9.97□□□□□ -0.81
PTPRN-204ENST00000423636 SAXO1Q8IYX7 474 aa9.97□□□□□ -0.81
PTPRN-204ENST00000423636 CCL13Q99616 98 aa9.97□□□□□ -0.81
PTPRN-204ENST00000423636 TMEM204Q9BSN7 226 aa9.97□□□□□ -0.81
PTPRN-204ENST00000423636 LYRM2Q9NU23 88 aaPredicted RBP9.97□□□□□ -0.81
PTPRN-204ENST00000423636 MMP24Q9Y5R2 645 aa9.97□□□□□ -0.81
PTPRN-204ENST00000423636 IGKV1D-17A0A075B6S4 117 aa9.97□□□□□ -0.81
PTPRN-204ENST00000423636 TRAV3A0A0B4J244 114 aa9.97□□□□□ -0.81
PTPRN-204ENST00000423636 SMCO3A2RU48 225 aa9.97□□□□□ -0.81
PTPRN-204ENST00000423636 GYPAP02724 150 aa9.97□□□□□ -0.81
PTPRN-204ENST00000423636 CRYBA1P05813 215 aa9.97□□□□□ -0.81
PTPRN-204ENST00000423636 ZNF134P52741 427 aa9.97□□□□□ -0.81
PTPRN-204ENST00000423636 BRWD1-AS2P59051 145 aa9.97□□□□□ -0.81
PTPRN-204ENST00000423636 NCR3LG1Q68D85 454 aa9.97□□□□□ -0.81
PTPRN-204ENST00000423636 FAM216BQ8N7L0 139 aa9.97□□□□□ -0.81
PTPRN-204ENST00000423636 CLRN3Q8NCR9 226 aa9.97□□□□□ -0.81
PTPRN-204ENST00000423636 PKIBQ9C010 78 aa9.97□□□□□ -0.81
PTPRN-204ENST00000423636 CACNA1AO00555 2505 aa9.96□□□□□ -0.81
PTPRN-204ENST00000423636 ZNF891A8MT65 544 aaPredicted RBP9.96□□□□□ -0.81
PTPRN-204ENST00000423636 H0Y980 276 aa9.96□□□□□ -0.81
PTPRN-204ENST00000423636 AQP7O14520 342 aa9.96□□□□□ -0.81
PTPRN-204ENST00000423636 CRYAAP02489 173 aa9.96□□□□□ -0.81
PTPRN-204ENST00000423636 ID3Q02535 119 aa9.96□□□□□ -0.81
PTPRN-204ENST00000423636 PEA15Q15121 130 aa9.96□□□□□ -0.81
PTPRN-204ENST00000423636 ZNF343Q6P1L6 599 aa9.96□□□□□ -0.81
PTPRN-204ENST00000423636 LRTM2Q8N967 370 aa9.96□□□□□ -0.81
PTPRN-204ENST00000423636 GATAD1Q8WUU5 269 aa9.96□□□□□ -0.81
PTPRN-204ENST00000423636 SDSLQ96GA7 329 aa9.96□□□□□ -0.81
PTPRN-204ENST00000423636 MRPL37Q9BZE1 423 aaKnown RBP9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms