RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 KIF25Q9UIL4 384 aa4.51□□□□□ -1.69
LINC00458-201ENST00000423442 TRAPPC2LQ9UL33 140 aa4.51□□□□□ -1.69
LINC00458-201ENST00000423442 TET2Q6N021 2002 aaPredicted RBP4.51□□□□□ -1.69
LINC00458-201ENST00000423442 TRBV5-5A0A0J9YX44 114 aa4.5□□□□□ -1.69
LINC00458-201ENST00000423442 TMEM30CPA0ZSE6 113 aa4.5□□□□□ -1.69
LINC00458-201ENST00000423442 SH2D7A6NKC9 451 aaPredicted RBP4.5□□□□□ -1.69
LINC00458-201ENST00000423442 BUB1B-PAK6H3BSN5 160 aa4.5□□□□□ -1.69
LINC00458-201ENST00000423442 M0QZK8 103 aa4.5□□□□□ -1.69
LINC00458-201ENST00000423442 AIPO00170 330 aa4.5□□□□□ -1.69
LINC00458-201ENST00000423442 GEMIN2O14893 280 aaKnown RBP4.5□□□□□ -1.69
LINC00458-201ENST00000423442 PIN1P1O15428 100 aa4.5□□□□□ -1.69
LINC00458-201ENST00000423442 CA11O75493 328 aa4.5□□□□□ -1.69
LINC00458-201ENST00000423442 ARL6IP5O75915 188 aa4.5□□□□□ -1.69
LINC00458-201ENST00000423442 PRB2P02812 416 aaPredicted RBP4.5□□□□□ -1.69
LINC00458-201ENST00000423442 GAPDHP04406 335 aaKnown RBP4.5□□□□□ -1.69
LINC00458-201ENST00000423442 GLAP06280 429 aa4.5□□□□□ -1.69
LINC00458-201ENST00000423442 UBBP0CG47 229 aa4.5□□□□□ -1.69
LINC00458-201ENST00000423442 LYL1P12980 280 aa4.5□□□□□ -1.69
LINC00458-201ENST00000423442 PSMA1P25786 263 aaKnown RBP4.5□□□□□ -1.69
LINC00458-201ENST00000423442 IL3RAP26951 378 aa4.5□□□□□ -1.69
LINC00458-201ENST00000423442 OR3A4PP47883 348 aa4.5□□□□□ -1.69
LINC00458-201ENST00000423442 DYNLT3P51808 116 aa4.5□□□□□ -1.69
LINC00458-201ENST00000423442 MADCAM1Q13477 382 aa4.5□□□□□ -1.69
LINC00458-201ENST00000423442 HES1Q14469 280 aa4.5□□□□□ -1.69
LINC00458-201ENST00000423442 LTC4SQ16873 150 aa4.5□□□□□ -1.69
LINC00458-201ENST00000423442 PIGYQ3MUY2 71 aa4.5□□□□□ -1.69
LINC00458-201ENST00000423442 RBM48Q5RL73 367 aaKnown RBP4.5□□□□□ -1.69
LINC00458-201ENST00000423442 C6orf183Q5T699 404 aa4.5□□□□□ -1.69
LINC00458-201ENST00000423442 PRAMEF5Q5TYX0 476 aa4.5□□□□□ -1.69
LINC00458-201ENST00000423442 RAB12Q6IQ22 244 aa4.5□□□□□ -1.69
LINC00458-201ENST00000423442 TRAT1Q6PIZ9 186 aa4.5□□□□□ -1.69
LINC00458-201ENST00000423442 Q8NFD4 153 aa4.5□□□□□ -1.69
LINC00458-201ENST00000423442 KCNG3Q8TAE7 436 aa4.5□□□□□ -1.69
LINC00458-201ENST00000423442 CCDC107Q8WV48 283 aa4.5□□□□□ -1.69
LINC00458-201ENST00000423442 PHYHIPQ92561 330 aa4.5□□□□□ -1.69
LINC00458-201ENST00000423442 ARL11Q969Q4 196 aa4.5□□□□□ -1.69
LINC00458-201ENST00000423442 DERL3Q96Q80 235 aa4.5□□□□□ -1.69
LINC00458-201ENST00000423442 UQCC2Q9BRT2 126 aa4.5□□□□□ -1.69
LINC00458-201ENST00000423442 TMED9Q9BVK6 235 aa4.5□□□□□ -1.69
LINC00458-201ENST00000423442 KRTAP4-4Q9BYR3 166 aa4.5□□□□□ -1.69
LINC00458-201ENST00000423442 SELENOIQ9C0D9 397 aa4.5□□□□□ -1.69
LINC00458-201ENST00000423442 RANBP3Q9H6Z4 567 aaPredicted RBP4.5□□□□□ -1.69
LINC00458-201ENST00000423442 PLGRKTQ9HBL7 147 aa4.5□□□□□ -1.69
LINC00458-201ENST00000423442 ACOT13Q9NPJ3 140 aa4.5□□□□□ -1.69
LINC00458-201ENST00000423442 CALYQ9NYX4 217 aa4.5□□□□□ -1.69
LINC00458-201ENST00000423442 IDI2-AS1Q9NZ38 188 aa4.5□□□□□ -1.69
LINC00458-201ENST00000423442 PEX16Q9Y5Y5 336 aa4.5□□□□□ -1.69
LINC00458-201ENST00000423442 DNAH9Q9NYC9 4486 aa4.5□□□□□ -1.69
LINC00458-201ENST00000423442 RYR2Q92736 4967 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 TRAV8-7A0A075B6U6 113 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 TRBV5-7A0A0A0MS05 114 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 TRAV24A0A0B4J272 114 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 FAM172BPA6NC97 362 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 FAM90A7PA6NKC0 464 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 FAM90A22PA8MWA6 464 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 FAM90A12PA8MX19 464 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 FAM90A23PA8MXZ1 464 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 ODF3BA8MYP8 253 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 J3QR06 171 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 SDCBPO00560 298 aaPredicted RBP4.49□□□□□ -1.69
LINC00458-201ENST00000423442 PDCD5O14737 125 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 ORC5O43913 435 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 MMP23AO75900 390 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 RGS11O94810 467 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 LALBAP00709 142 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 MT-ND4P03905 459 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 MGMTP16455 207 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 IGFBP3P17936 291 aaPredicted RBP4.49□□□□□ -1.69
LINC00458-201ENST00000423442 MYF6P23409 242 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 KRTAP5-9P26371 169 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 HTR2CP28335 458 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 RAB7AP51149 207 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 AQP4P55087 323 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 KRTAP10-3P60369 221 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 RPS11P62280 158 aaKnown RBP eCLIP4.49□□□□□ -1.69
LINC00458-201ENST00000423442 MRPS15P82914 257 aaKnown RBP4.49□□□□□ -1.69
LINC00458-201ENST00000423442 HERPUD1Q15011 391 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 C2orf68Q2NKX9 166 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 HSD17B12Q53GQ0 312 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 NHLRC3Q5JS37 347 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 C9orf152Q5JTZ5 239 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 SYT6Q5T7P8 510 aaPredicted RBP4.49□□□□□ -1.69
LINC00458-201ENST00000423442 LIPKQ5VXJ0 399 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 IZUMO2Q6UXV1 221 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 C16orf82Q7Z2V1 217 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 RNF144BQ7Z419 303 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 MOB3BQ86TA1 216 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 ZNF329Q86UD4 541 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 TMEM219Q86XT9 240 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 ZNF485Q8NCK3 441 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 OR13C5Q8NGS8 318 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 FAM110DQ8TAY7 271 aaPredicted RBP4.49□□□□□ -1.69
LINC00458-201ENST00000423442 MRGPRDQ8TDS7 321 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 RGP1Q92546 391 aaPredicted RBP4.49□□□□□ -1.69
LINC00458-201ENST00000423442 TOMM40LQ969M1 308 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 TMEM203Q969S6 136 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 ORAI1Q96D31 301 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 CNBD2Q96M20 576 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 CITED1Q99966 193 aa4.49□□□□□ -1.69
LINC00458-201ENST00000423442 URM1Q9BTM9 101 aaKnown RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms