RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 RIMS4Q9H426 269 aaPredicted RBP12.15□□□□□ -0.46
SPC24-201ENST00000423327 SLC23A1Q9UHI7 598 aa12.15□□□□□ -0.46
SPC24-201ENST00000423327 RAB27BO00194 218 aa12.14□□□□□ -0.47
SPC24-201ENST00000423327 PF4P02776 101 aa12.14□□□□□ -0.47
SPC24-201ENST00000423327 CT45A6P0DMU7 189 aa12.14□□□□□ -0.47
SPC24-201ENST00000423327 CT45A5P0DMU8 189 aa12.14□□□□□ -0.47
SPC24-201ENST00000423327 CT45A7P0DMV0 189 aa12.14□□□□□ -0.47
SPC24-201ENST00000423327 CD33P20138 364 aa12.14□□□□□ -0.47
SPC24-201ENST00000423327 GALP22466 123 aa12.14□□□□□ -0.47
SPC24-201ENST00000423327 ACTBP60709 375 aa12.14□□□□□ -0.47
SPC24-201ENST00000423327 FOXB2Q5VYV0 432 aa12.14□□□□□ -0.47
SPC24-201ENST00000423327 FAM71F2Q6NXP2 309 aa12.14□□□□□ -0.47
SPC24-201ENST00000423327 GLDNQ6ZMI3 551 aaPredicted RBP12.14□□□□□ -0.47
SPC24-201ENST00000423327 C8orf86Q6ZUL3 223 aa12.14□□□□□ -0.47
SPC24-201ENST00000423327 ABHD14BQ96IU4 210 aa12.14□□□□□ -0.47
SPC24-201ENST00000423327 RASL11BQ9BPW5 248 aa12.14□□□□□ -0.47
SPC24-201ENST00000423327 CMSS1Q9BQ75 279 aaKnown RBP12.14□□□□□ -0.47
SPC24-201ENST00000423327 ZNF107Q9UII5 783 aaPredicted RBP12.14□□□□□ -0.47
SPC24-201ENST00000423327 RAB22AQ9UL26 194 aa12.14□□□□□ -0.47
SPC24-201ENST00000423327 MFNGO00587 321 aa12.13□□□□□ -0.47
SPC24-201ENST00000423327 ITGB1BP1O14713 200 aa12.13□□□□□ -0.47
SPC24-201ENST00000423327 PDCD5O14737 125 aa12.13□□□□□ -0.47
SPC24-201ENST00000423327 NDUFA3O95167 84 aa12.13□□□□□ -0.47
SPC24-201ENST00000423327 RPLP1P05386 114 aaKnown RBP12.13□□□□□ -0.47
SPC24-201ENST00000423327 SNRPBP14678 240 aaKnown RBP12.13□□□□□ -0.47
SPC24-201ENST00000423327 RAB3BP20337 219 aa12.13□□□□□ -0.47
SPC24-201ENST00000423327 MYL9P24844 172 aa12.13□□□□□ -0.47
SPC24-201ENST00000423327 PSMB9P28065 219 aa12.13□□□□□ -0.47
SPC24-201ENST00000423327 SOX6P35712 828 aa12.13□□□□□ -0.47
SPC24-201ENST00000423327 PSMD7P51665 324 aa12.13□□□□□ -0.47
SPC24-201ENST00000423327 FAM131AQ6UXB0 335 aa12.13□□□□□ -0.47
SPC24-201ENST00000423327 MRPL41Q8IXM3 137 aaKnown RBP12.13□□□□□ -0.47
SPC24-201ENST00000423327 C11orf54Q9H0W9 315 aaPredicted RBP12.13□□□□□ -0.47
SPC24-201ENST00000423327 AURKAIP1Q9NWT8 199 aaPredicted RBP12.13□□□□□ -0.47
SPC24-201ENST00000423327 TXNL4BQ9NX01 149 aaKnown RBP12.13□□□□□ -0.47
SPC24-201ENST00000423327 IGHV7-81A0A0B4J1V7 117 aa12.12□□□□□ -0.47
SPC24-201ENST00000423327 H0YJW9 148 aa12.12□□□□□ -0.47
SPC24-201ENST00000423327 RAB29O14966 203 aa12.12□□□□□ -0.47
SPC24-201ENST00000423327 IGF1P05019 195 aa12.12□□□□□ -0.47
SPC24-201ENST00000423327 FCGR3AP08637 254 aa12.12□□□□□ -0.47
SPC24-201ENST00000423327 CD3GP09693 182 aa12.12□□□□□ -0.47
SPC24-201ENST00000423327 FGF9P31371 208 aaPredicted RBP12.12□□□□□ -0.47
SPC24-201ENST00000423327 CEACAM6P40199 344 aa12.12□□□□□ -0.47
SPC24-201ENST00000423327 THBS3P49746 956 aa12.12□□□□□ -0.47
SPC24-201ENST00000423327 SLC35B1P78383 322 aa12.12□□□□□ -0.47
SPC24-201ENST00000423327 NDPQ00604 133 aa12.12□□□□□ -0.47
SPC24-201ENST00000423327 RNF152Q8N8N0 203 aa12.12□□□□□ -0.47
SPC24-201ENST00000423327 NPBQ8NG41 125 aa12.12□□□□□ -0.47
SPC24-201ENST00000423327 OR10R2Q8NGX6 335 aa12.12□□□□□ -0.47
SPC24-201ENST00000423327 MAFIPQ8WZ33 124 aa12.12□□□□□ -0.47
SPC24-201ENST00000423327 PIPOXQ9P0Z9 390 aa12.12□□□□□ -0.47
SPC24-201ENST00000423327 ELF5Q9UKW6 265 aaPredicted RBP12.12□□□□□ -0.47
SPC24-201ENST00000423327 TRDCB7Z8K6 153 aa12.11□□□□□ -0.47
SPC24-201ENST00000423327 ATP6V0E1O15342 81 aa12.11□□□□□ -0.47
SPC24-201ENST00000423327 NBR2O15453 112 aa12.11□□□□□ -0.47
SPC24-201ENST00000423327 HLA-DRB1P01911 266 aa12.11□□□□□ -0.47
SPC24-201ENST00000423327 HIST1H1DP16402 221 aaKnown RBP12.11□□□□□ -0.47
SPC24-201ENST00000423327 GNB3P16520 340 aa12.11□□□□□ -0.47
SPC24-201ENST00000423327 RAB6AP20340 208 aa12.11□□□□□ -0.47
SPC24-201ENST00000423327 LINC00205P59089 165 aa12.11□□□□□ -0.47
SPC24-201ENST00000423327 PNLIPRP3Q17RR3 467 aa12.11□□□□□ -0.47
SPC24-201ENST00000423327 C5orf64Q2M2E5 130 aa12.11□□□□□ -0.47
SPC24-201ENST00000423327 ZNF773Q6PK81 442 aa12.11□□□□□ -0.47
SPC24-201ENST00000423327 COMMD1Q8N668 190 aa12.11□□□□□ -0.47
SPC24-201ENST00000423327 KLHL30-AS1Q8NEE0 82 aa12.11□□□□□ -0.47
SPC24-201ENST00000423327 FCGR1BQ92637 280 aa12.11□□□□□ -0.47
SPC24-201ENST00000423327 PTX4Q96A99 478 aa12.11□□□□□ -0.47
SPC24-201ENST00000423327 RAB3CQ96E17 227 aa12.11□□□□□ -0.47
SPC24-201ENST00000423327 C5orf30Q96GV9 206 aa12.11□□□□□ -0.47
SPC24-201ENST00000423327 DUX3Q96PT4 197 aa12.11□□□□□ -0.47
SPC24-201ENST00000423327 P2RX4Q99571 388 aa12.11□□□□□ -0.47
SPC24-201ENST00000423327 CABLES2Q9BTV7 478 aa12.11□□□□□ -0.47
SPC24-201ENST00000423327 YTHDF1Q9BYJ9 559 aaKnown RBP12.11□□□□□ -0.47
SPC24-201ENST00000423327 TOLLIPQ9H0E2 274 aa12.11□□□□□ -0.47
SPC24-201ENST00000423327 OR51E2Q9H255 320 aa12.11□□□□□ -0.47
SPC24-201ENST00000423327 Q9H521 79 aa12.11□□□□□ -0.47
SPC24-201ENST00000423327 RNF167Q9H6Y7 350 aa12.11□□□□□ -0.47
SPC24-201ENST00000423327 ZFP57Q9NU63 452 aa12.11□□□□□ -0.47
SPC24-201ENST00000423327 ZNF580Q9UK33 172 aa12.11□□□□□ -0.47
SPC24-201ENST00000423327 MGAT4AQ9UM21 535 aa12.11□□□□□ -0.47
SPC24-201ENST00000423327 STUB1Q9UNE7 303 aa12.11□□□□□ -0.47
SPC24-201ENST00000423327 FBXO7Q9Y3I1 522 aa12.11□□□□□ -0.47
SPC24-201ENST00000423327 G3V318 75 aa12.1□□□□□ -0.47
SPC24-201ENST00000423327 IGHG4P01861 327 aa12.1□□□□□ -0.47
SPC24-201ENST00000423327 ZBTB25P24278 435 aa12.1□□□□□ -0.47
SPC24-201ENST00000423327 PPIFP30405 207 aaKnown RBP12.1□□□□□ -0.47
SPC24-201ENST00000423327 FOXE3Q13461 319 aa12.1□□□□□ -0.47
SPC24-201ENST00000423327 DEFB136Q30KP8 78 aa12.1□□□□□ -0.47
SPC24-201ENST00000423327 IGSF11Q5DX21 431 aa12.1□□□□□ -0.47
SPC24-201ENST00000423327 TEX38Q6PEX7 206 aa12.1□□□□□ -0.47
SPC24-201ENST00000423327 OR5AN1Q8NGI8 311 aa12.1□□□□□ -0.47
SPC24-201ENST00000423327 MYOZ3Q8TDC0 251 aa12.1□□□□□ -0.47
SPC24-201ENST00000423327 RAX2Q96IS3 184 aa12.1□□□□□ -0.47
SPC24-201ENST00000423327 KCTD7Q96MP8 289 aa12.1□□□□□ -0.47
SPC24-201ENST00000423327 NECAP2Q9NVZ3 263 aa12.1□□□□□ -0.47
SPC24-201ENST00000423327 RDH8Q9NYR8 311 aa12.1□□□□□ -0.47
SPC24-201ENST00000423327 ZNF230Q9UIE0 474 aaPredicted RBP12.1□□□□□ -0.47
SPC24-201ENST00000423327 RNF150Q9ULK6 438 aa12.1□□□□□ -0.47
SPC24-201ENST00000423327 A0A075B6Q4 140 aa12.09□□□□□ -0.47
SPC24-201ENST00000423327 IGKV1D-8A0A087WSZ0 117 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms