RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 NCBP2LA6PVI3 153 aaKnown RBP11.98□□□□□ -0.49
USB1-202ENST00000423271 NAPSAO96009 420 aa11.98□□□□□ -0.49
USB1-202ENST00000423271 ZNF137PP52743 207 aa11.98□□□□□ -0.49
USB1-202ENST00000423271 SCAND1P57086 179 aa11.98□□□□□ -0.49
USB1-202ENST00000423271 RPL23AP62750 156 aaKnown RBP11.98□□□□□ -0.49
USB1-202ENST00000423271 TMEM30BQ3MIR4 351 aa11.98□□□□□ -0.49
USB1-202ENST00000423271 ETV3LQ6ZN32 361 aa11.98□□□□□ -0.49
USB1-202ENST00000423271 REC114Q7Z4M0 266 aa11.98□□□□□ -0.49
USB1-202ENST00000423271 TGIF2LXQ8IUE1 241 aa11.98□□□□□ -0.49
USB1-202ENST00000423271 CROCCP3Q8IVE0 287 aa11.98□□□□□ -0.49
USB1-202ENST00000423271 Q8N9W7 124 aa11.98□□□□□ -0.49
USB1-202ENST00000423271 OR2T10Q8NGZ9 312 aa11.98□□□□□ -0.49
USB1-202ENST00000423271 CHPT1Q8WUD6 406 aa11.98□□□□□ -0.49
USB1-202ENST00000423271 SLC25A38Q96DW6 304 aa11.98□□□□□ -0.49
USB1-202ENST00000423271 CHMP1AQ9HD42 196 aaPredicted RBP11.98□□□□□ -0.49
USB1-202ENST00000423271 MBNL3Q9NUK0 354 aaKnown RBP11.98□□□□□ -0.49
USB1-202ENST00000423271 RHBDL2Q9NX52 303 aa11.98□□□□□ -0.49
USB1-202ENST00000423271 ABRACLQ9P1F3 81 aa11.98□□□□□ -0.49
USB1-202ENST00000423271 KCNK7Q9Y2U2 307 aa11.98□□□□□ -0.49
USB1-202ENST00000423271 ETV7Q9Y603 341 aa11.98□□□□□ -0.49
USB1-202ENST00000423271 A0A075B6Q4 140 aa11.97□□□□□ -0.49
USB1-202ENST00000423271 MFNGO00587 321 aa11.97□□□□□ -0.49
USB1-202ENST00000423271 TMEM127O75204 238 aa11.97□□□□□ -0.49
USB1-202ENST00000423271 HIST1H1DP16402 221 aaKnown RBP11.97□□□□□ -0.49
USB1-202ENST00000423271 GNB3P16520 340 aa11.97□□□□□ -0.49
USB1-202ENST00000423271 CD1BP29016 333 aa11.97□□□□□ -0.49
USB1-202ENST00000423271 GPR12P47775 334 aa11.97□□□□□ -0.49
USB1-202ENST00000423271 ZNF880Q6PDB4 577 aa11.97□□□□□ -0.49
USB1-202ENST00000423271 TRAT1Q6PIZ9 186 aa11.97□□□□□ -0.49
USB1-202ENST00000423271 STPG2Q8N412 459 aa11.97□□□□□ -0.49
USB1-202ENST00000423271 OR52L2PQ8NGH6 319 aa11.97□□□□□ -0.49
USB1-202ENST00000423271 SETD6Q8TBK2 473 aa11.97□□□□□ -0.49
USB1-202ENST00000423271 MRAPQ8TCY5 172 aa11.97□□□□□ -0.49
USB1-202ENST00000423271 CMSS1Q9BQ75 279 aaKnown RBP11.97□□□□□ -0.49
USB1-202ENST00000423271 DCSTAMPQ9H295 470 aa11.97□□□□□ -0.49
USB1-202ENST00000423271 RAB9BQ9NP90 201 aa11.97□□□□□ -0.49
USB1-202ENST00000423271 OR2S2Q9NQN1 319 aa11.97□□□□□ -0.49
USB1-202ENST00000423271 PLSCR3Q9NRY6 295 aa11.97□□□□□ -0.49
USB1-202ENST00000423271 MOSP00540 346 aa11.96□□□□□ -0.49
USB1-202ENST00000423271 PPP1CCP36873 323 aaKnown RBP11.96□□□□□ -0.49
USB1-202ENST00000423271 MORN2Q502X0 79 aa11.96□□□□□ -0.49
USB1-202ENST00000423271 FOXRED2Q8IWF2 684 aa11.96□□□□□ -0.49
USB1-202ENST00000423271 LINC00482Q8N8I6 264 aa11.96□□□□□ -0.49
USB1-202ENST00000423271 S1PR3Q99500 378 aa11.96□□□□□ -0.49
USB1-202ENST00000423271 ABCG5Q9H222 651 aa11.96□□□□□ -0.49
USB1-202ENST00000423271 C12orf4Q9NQ89 552 aa11.96□□□□□ -0.49
USB1-202ENST00000423271 LIN7CQ9NUP9 197 aaKnown RBP11.96□□□□□ -0.49
USB1-202ENST00000423271 KCNIP1Q9NZI2 227 aa11.96□□□□□ -0.49
USB1-202ENST00000423271 ELF5Q9UKW6 265 aaPredicted RBP11.96□□□□□ -0.49
USB1-202ENST00000423271 SPATA2Q9UM82 520 aa11.96□□□□□ -0.49
USB1-202ENST00000423271 TRBV6-6A0A0A6YYG2 114 aa11.95□□□□□ -0.5
USB1-202ENST00000423271 TXNL1O43396 289 aa11.95□□□□□ -0.5
USB1-202ENST00000423271 CD3GP09693 182 aa11.95□□□□□ -0.5
USB1-202ENST00000423271 F2RL1P55085 397 aa11.95□□□□□ -0.5
USB1-202ENST00000423271 LSAMPQ13449 338 aa11.95□□□□□ -0.5
USB1-202ENST00000423271 SPCS2Q15005 226 aa11.95□□□□□ -0.5
USB1-202ENST00000423271 HMGN3Q15651 99 aa11.95□□□□□ -0.5
USB1-202ENST00000423271 CDNFQ49AH0 187 aa11.95□□□□□ -0.5
USB1-202ENST00000423271 C8orf86Q6ZUL3 223 aa11.95□□□□□ -0.5
USB1-202ENST00000423271 MOB1BQ7L9L4 216 aa11.95□□□□□ -0.5
USB1-202ENST00000423271 MRPL41Q8IXM3 137 aaKnown RBP11.95□□□□□ -0.5
USB1-202ENST00000423271 ODF3L1Q8IXM7 274 aa11.95□□□□□ -0.5
USB1-202ENST00000423271 RAB2BQ8WUD1 216 aa11.95□□□□□ -0.5
USB1-202ENST00000423271 HSPB9Q9BQS6 159 aa11.95□□□□□ -0.5
USB1-202ENST00000423271 ABHD14AQ9BUJ0 271 aa11.95□□□□□ -0.5
USB1-202ENST00000423271 RIMS4Q9H426 269 aaPredicted RBP11.95□□□□□ -0.5
USB1-202ENST00000423271 JPT1Q9UK76 154 aa11.95□□□□□ -0.5
USB1-202ENST00000423271 NUDT19A8MXV4 375 aa11.94□□□□□ -0.5
USB1-202ENST00000423271 AP4M1O00189 453 aa11.94□□□□□ -0.5
USB1-202ENST00000423271 LANCL1O43813 399 aa11.94□□□□□ -0.5
USB1-202ENST00000423271 SCGNO76038 276 aa11.94□□□□□ -0.5
USB1-202ENST00000423271 THBS3P49746 956 aa11.94□□□□□ -0.5
USB1-202ENST00000423271 TMBIM6P55061 237 aa11.94□□□□□ -0.5
USB1-202ENST00000423271 SLC35B1P78383 322 aa11.94□□□□□ -0.5
USB1-202ENST00000423271 LCNL1Q6ZST4 164 aa11.94□□□□□ -0.5
USB1-202ENST00000423271 ZNF554Q86TJ5 538 aa11.94□□□□□ -0.5
USB1-202ENST00000423271 FAM71E2Q8N5Q1 922 aa11.94□□□□□ -0.5
USB1-202ENST00000423271 SAMD12Q8N8I0 201 aa11.94□□□□□ -0.5
USB1-202ENST00000423271 KLHL30-AS1Q8NEE0 82 aa11.94□□□□□ -0.5
USB1-202ENST00000423271 KCTD12Q96CX2 325 aaKnown RBP11.94□□□□□ -0.5
USB1-202ENST00000423271 RCC1LQ96I51 464 aaKnown RBP11.94□□□□□ -0.5
USB1-202ENST00000423271 MRPL20Q9BYC9 149 aaKnown RBP11.94□□□□□ -0.5
USB1-202ENST00000423271 Q9N2K0 584 aa11.94□□□□□ -0.5
USB1-202ENST00000423271 RORCP51449 518 aa11.93□□□□□ -0.5
USB1-202ENST00000423271 KRTAP10-11P60412 298 aa11.93□□□□□ -0.5
USB1-202ENST00000423271 MRPS15P82914 257 aaKnown RBP11.93□□□□□ -0.5
USB1-202ENST00000423271 HTD2P86397 168 aa11.93□□□□□ -0.5
USB1-202ENST00000423271 STEAP3Q658P3 488 aa11.93□□□□□ -0.5
USB1-202ENST00000423271 COMMD1Q8N668 190 aa11.93□□□□□ -0.5
USB1-202ENST00000423271 ISOC1Q96CN7 298 aa11.93□□□□□ -0.5
USB1-202ENST00000423271 DUX3Q96PT4 197 aa11.93□□□□□ -0.5
USB1-202ENST00000423271 RASL11BQ9BPW5 248 aa11.93□□□□□ -0.5
USB1-202ENST00000423271 BCL7BQ9BQE9 202 aa11.93□□□□□ -0.5
USB1-202ENST00000423271 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.93□□□□□ -0.5
USB1-202ENST00000423271 COMMD3Q9UBI1 195 aa11.93□□□□□ -0.5
USB1-202ENST00000423271 CEPT1Q9Y6K0 416 aa11.93□□□□□ -0.5
USB1-202ENST00000423271 TRAV18A0A075B6X5 111 aa11.92□□□□□ -0.5
USB1-202ENST00000423271 TMEM235A6NFC5 223 aa11.92□□□□□ -0.5
USB1-202ENST00000423271 H3BMQ9 156 aa11.92□□□□□ -0.5
USB1-202ENST00000423271 YPEL1O60688 119 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 179.5 ms