RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 ARHGDIBP52566 201 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 EFNB2P52799 333 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 PRRX1P54821 245 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 GABARAPL2P60520 117 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 RPS27AP62979 156 aaKnown RBP5.53□□□□□ -1.52
HMGN1-205ENST00000419378 VAMP2P63027 116 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 FABP5Q01469 135 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 UNC119Q13432 240 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 TRAM1Q15629 374 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 SSX1Q16384 188 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 SIGIRRQ6IA17 410 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 C11orf88Q6PI97 169 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 GAPTQ8N292 157 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 Q8N2B8 174 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 OR10A7Q8NGE5 316 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 OR6M1Q8NGM8 313 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 OR4K15Q8NH41 348 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 OR9G1Q8NH87 305 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 OR2T6Q8NHC8 308 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 UBALD1Q8TB05 177 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 GFI1Q99684 422 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 TMEM59Q9BXS4 323 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 KRTAP4-5Q9BYR2 181 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 KCNK15Q9H427 330 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 Q9H521 79 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 ZNF702PQ9H963 129 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 PSG11Q9UQ72 335 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 AMMECR1Q9Y4X0 333 aaPredicted RBP5.53□□□□□ -1.52
HMGN1-205ENST00000419378 PEX16Q9Y5Y5 336 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 WNK1Q9H4A3 2382 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 A0A1W2PPI3 338 aa5.52□□□□□ -1.53
HMGN1-205ENST00000419378 TMEM14DPA8MWL7 114 aa5.52□□□□□ -1.53
HMGN1-205ENST00000419378 OOSP1A8MZH6 123 aa5.52□□□□□ -1.53
HMGN1-205ENST00000419378 C12orf77C9JDV5 145 aa5.52□□□□□ -1.53
HMGN1-205ENST00000419378 J3QR06 171 aa5.52□□□□□ -1.53
HMGN1-205ENST00000419378 M0QZ24 198 aa5.52□□□□□ -1.53
HMGN1-205ENST00000419378 SDCBPO00560 298 aaPredicted RBP5.52□□□□□ -1.53
HMGN1-205ENST00000419378 SLC17A2O00624 439 aa5.52□□□□□ -1.53
HMGN1-205ENST00000419378 DENRO43583 198 aaKnown RBP5.52□□□□□ -1.53
HMGN1-205ENST00000419378 ORC5O43913 435 aa5.52□□□□□ -1.53
HMGN1-205ENST00000419378 MRPS14O60783 128 aaKnown RBP5.52□□□□□ -1.53
HMGN1-205ENST00000419378 PDCD6O75340 191 aa5.52□□□□□ -1.53
HMGN1-205ENST00000419378 CA11O75493 328 aa5.52□□□□□ -1.53
HMGN1-205ENST00000419378 GLAP06280 429 aa5.52□□□□□ -1.53
HMGN1-205ENST00000419378 GZMHP20718 246 aa5.52□□□□□ -1.53
HMGN1-205ENST00000419378 FUT3P21217 361 aa5.52□□□□□ -1.53
HMGN1-205ENST00000419378 CD24P25063 80 aa5.52□□□□□ -1.53
HMGN1-205ENST00000419378 CALRP27797 417 aaKnown RBP5.52□□□□□ -1.53
HMGN1-205ENST00000419378 CHATP28329 748 aa5.52□□□□□ -1.53
HMGN1-205ENST00000419378 BRS3P32247 399 aa5.52□□□□□ -1.53
HMGN1-205ENST00000419378 EMX1Q04741 257 aaPredicted RBP5.52□□□□□ -1.53
HMGN1-205ENST00000419378 MADCAM1Q13477 382 aa5.52□□□□□ -1.53
HMGN1-205ENST00000419378 DIAPH2-AS1Q14236 149 aa5.52□□□□□ -1.53
HMGN1-205ENST00000419378 P2RY14Q15391 338 aa5.52□□□□□ -1.53
HMGN1-205ENST00000419378 ANXA2RQ3ZCQ2 193 aa5.52□□□□□ -1.53
HMGN1-205ENST00000419378 SYT6Q5T7P8 510 aaPredicted RBP5.52□□□□□ -1.53
HMGN1-205ENST00000419378 OR10K2Q6IF99 312 aa5.52□□□□□ -1.53
HMGN1-205ENST00000419378 SLC16A12Q6ZSM3 486 aa5.52□□□□□ -1.53
HMGN1-205ENST00000419378 KLHDC1Q8N7A1 406 aa5.52□□□□□ -1.53
HMGN1-205ENST00000419378 OR52M1Q8NGK5 317 aa5.52□□□□□ -1.53
HMGN1-205ENST00000419378 TOMM40LQ969M1 308 aa5.52□□□□□ -1.53
HMGN1-205ENST00000419378 ARL11Q969Q4 196 aa5.52□□□□□ -1.53
HMGN1-205ENST00000419378 RPEQ96AT9 228 aa5.52□□□□□ -1.53
HMGN1-205ENST00000419378 NDUFB11Q9NX14 153 aa5.52□□□□□ -1.53
HMGN1-205ENST00000419378 TRAPPC2LQ9UL33 140 aa5.52□□□□□ -1.53
HMGN1-205ENST00000419378 AK6Q9Y3D8 172 aaKnown RBP5.52□□□□□ -1.53
HMGN1-205ENST00000419378 A0A0A6YYD4 124 aa5.51□□□□□ -1.53
HMGN1-205ENST00000419378 IGHV3-43A0A0B4J1X8 118 aa5.51□□□□□ -1.53
HMGN1-205ENST00000419378 A0A1W2PPE3 182 aa5.51□□□□□ -1.53
HMGN1-205ENST00000419378 J3KRW8 73 aa5.51□□□□□ -1.53
HMGN1-205ENST00000419378 HSD17B6O14756 317 aa5.51□□□□□ -1.53
HMGN1-205ENST00000419378 TIMM23O14925 209 aa5.51□□□□□ -1.53
HMGN1-205ENST00000419378 SPINT2O43291 252 aa5.51□□□□□ -1.53
HMGN1-205ENST00000419378 IGHV3-43DP0DP04 118 aa5.51□□□□□ -1.53
HMGN1-205ENST00000419378 ARSBP15848 533 aa5.51□□□□□ -1.53
HMGN1-205ENST00000419378 RCC1P18754 421 aaPredicted RBP5.51□□□□□ -1.53
HMGN1-205ENST00000419378 MNDAP41218 407 aa5.51□□□□□ -1.53
HMGN1-205ENST00000419378 BLCAPP62952 87 aa5.51□□□□□ -1.53
HMGN1-205ENST00000419378 QRFPP83859 136 aa5.51□□□□□ -1.53
HMGN1-205ENST00000419378 HERPUD1Q15011 391 aa5.51□□□□□ -1.53
HMGN1-205ENST00000419378 RAB11BQ15907 218 aa5.51□□□□□ -1.53
HMGN1-205ENST00000419378 TMEM30BQ3MIR4 351 aa5.51□□□□□ -1.53
HMGN1-205ENST00000419378 C6orf183Q5T699 404 aa5.51□□□□□ -1.53
HMGN1-205ENST00000419378 UBE2UQ5VVX9 321 aa5.51□□□□□ -1.53
HMGN1-205ENST00000419378 FAM53AQ6NSI3 398 aaPredicted RBP5.51□□□□□ -1.53
HMGN1-205ENST00000419378 TRAT1Q6PIZ9 186 aa5.51□□□□□ -1.53
HMGN1-205ENST00000419378 CD200R1LQ6Q8B3 271 aa5.51□□□□□ -1.53
HMGN1-205ENST00000419378 C16orf82Q7Z2V1 217 aa5.51□□□□□ -1.53
HMGN1-205ENST00000419378 OR2W3Q7Z3T1 314 aa5.51□□□□□ -1.53
HMGN1-205ENST00000419378 LINC00311Q8N616 119 aa5.51□□□□□ -1.53
HMGN1-205ENST00000419378 C8orf31Q8N9H6 132 aa5.51□□□□□ -1.53
HMGN1-205ENST00000419378 OR10X1Q8NGY0 326 aa5.51□□□□□ -1.53
HMGN1-205ENST00000419378 OR56B4Q8NH76 319 aa5.51□□□□□ -1.53
HMGN1-205ENST00000419378 OR1L1Q8NH94 360 aa5.51□□□□□ -1.53
HMGN1-205ENST00000419378 KCNG3Q8TAE7 436 aa5.51□□□□□ -1.53
HMGN1-205ENST00000419378 MRPL30Q8TCC3 161 aaKnown RBP5.51□□□□□ -1.53
HMGN1-205ENST00000419378 SULT4A1Q9BR01 284 aa5.51□□□□□ -1.53
HMGN1-205ENST00000419378 NICN1Q9BSH3 213 aa5.51□□□□□ -1.53
HMGN1-205ENST00000419378 SLC25A33Q9BSK2 321 aa5.51□□□□□ -1.53
HMGN1-205ENST00000419378 TM2D2Q9BX73 214 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms