RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 OR51E2Q9H255 320 aa14.99□□□□□ -0.01
SF3A1-202ENST00000411423 RIMS4Q9H426 269 aaPredicted RBP14.99□□□□□ -0.01
SF3A1-202ENST00000411423 Q9H521 79 aa14.99□□□□□ -0.01
SF3A1-202ENST00000411423 RNF167Q9H6Y7 350 aa14.99□□□□□ -0.01
SF3A1-202ENST00000411423 SLC23A1Q9UHI7 598 aa14.99□□□□□ -0.01
SF3A1-202ENST00000411423 ELF5Q9UKW6 265 aaPredicted RBP14.99□□□□□ -0.01
SF3A1-202ENST00000411423 CD3GP09693 182 aa14.98□□□□□ -0.01
SF3A1-202ENST00000411423 CT45A6P0DMU7 189 aa14.98□□□□□ -0.01
SF3A1-202ENST00000411423 CT45A5P0DMU8 189 aa14.98□□□□□ -0.01
SF3A1-202ENST00000411423 CT45A7P0DMV0 189 aa14.98□□□□□ -0.01
SF3A1-202ENST00000411423 GNB3P16520 340 aa14.98□□□□□ -0.01
SF3A1-202ENST00000411423 FGF9P31371 208 aaPredicted RBP14.98□□□□□ -0.01
SF3A1-202ENST00000411423 LINC00205P59089 165 aa14.98□□□□□ -0.01
SF3A1-202ENST00000411423 GLDNQ6ZMI3 551 aaPredicted RBP14.98□□□□□ -0.01
SF3A1-202ENST00000411423 WFDC9Q8NEX5 89 aa14.98□□□□□ -0.01
SF3A1-202ENST00000411423 RASL11BQ9BPW5 248 aa14.98□□□□□ -0.01
SF3A1-202ENST00000411423 C11orf54Q9H0W9 315 aaPredicted RBP14.98□□□□□ -0.01
SF3A1-202ENST00000411423 RRP15Q9Y3B9 282 aaKnown RBP14.98□□□□□ -0.01
SF3A1-202ENST00000411423 MFNGO00587 321 aa14.97□□□□□ -0.01
SF3A1-202ENST00000411423 PF4V1P10720 104 aa14.97□□□□□ -0.01
SF3A1-202ENST00000411423 IGLL1P15814 213 aa14.97□□□□□ -0.01
SF3A1-202ENST00000411423 CEACAM6P40199 344 aa14.97□□□□□ -0.01
SF3A1-202ENST00000411423 ACTBP60709 375 aa14.97□□□□□ -0.01
SF3A1-202ENST00000411423 RPL23AP62750 156 aaKnown RBP14.97□□□□□ -0.01
SF3A1-202ENST00000411423 CFHR3Q02985 330 aa14.97□□□□□ -0.01
SF3A1-202ENST00000411423 FOXRED2Q8IWF2 684 aa14.97□□□□□ -0.01
SF3A1-202ENST00000411423 OR8H1Q8NGG4 311 aa14.97□□□□□ -0.01
SF3A1-202ENST00000411423 OR10R2Q8NGX6 335 aa14.97□□□□□ -0.01
SF3A1-202ENST00000411423 MAFIPQ8WZ33 124 aa14.97□□□□□ -0.01
SF3A1-202ENST00000411423 FCGR1BQ92637 280 aa14.97□□□□□ -0.01
SF3A1-202ENST00000411423 RAB3CQ96E17 227 aa14.97□□□□□ -0.01
SF3A1-202ENST00000411423 ZNF107Q9UII5 783 aaPredicted RBP14.97□□□□□ -0.01
SF3A1-202ENST00000411423 STUB1Q9UNE7 303 aa14.97□□□□□ -0.01
SF3A1-202ENST00000411423 AP4M1O00189 453 aa14.96□□□□□ -0.01
SF3A1-202ENST00000411423 FCGR3AP08637 254 aa14.96□□□□□ -0.01
SF3A1-202ENST00000411423 CLEC2LP0C7M8 214 aa14.96□□□□□ -0.01
SF3A1-202ENST00000411423 RAB6AP20340 208 aa14.96□□□□□ -0.01
SF3A1-202ENST00000411423 MMDQ15546 238 aa14.96□□□□□ -0.01
SF3A1-202ENST00000411423 FAM131AQ6UXB0 335 aa14.96□□□□□ -0.01
SF3A1-202ENST00000411423 PHF21AQ96BD5 680 aa14.96□□□□□ -0.01
SF3A1-202ENST00000411423 ZNF230Q9UIE0 474 aaPredicted RBP14.96□□□□□ -0.01
SF3A1-202ENST00000411423 RNF150Q9ULK6 438 aa14.96□□□□□ -0.01
SF3A1-202ENST00000411423 A0A075B6Q4 140 aa14.95□□□□□ -0.02
SF3A1-202ENST00000411423 TRDCB7Z8K6 153 aa14.95□□□□□ -0.02
SF3A1-202ENST00000411423 ITGB1BP1O14713 200 aa14.95□□□□□ -0.02
SF3A1-202ENST00000411423 RAB29O14966 203 aa14.95□□□□□ -0.02
SF3A1-202ENST00000411423 HIST1H1DP16402 221 aaKnown RBP14.95□□□□□ -0.02
SF3A1-202ENST00000411423 IGSF11Q5DX21 431 aa14.95□□□□□ -0.02
SF3A1-202ENST00000411423 FAM71F2Q6NXP2 309 aa14.95□□□□□ -0.02
SF3A1-202ENST00000411423 C8orf86Q6ZUL3 223 aa14.95□□□□□ -0.02
SF3A1-202ENST00000411423 PTX4Q96A99 478 aa14.95□□□□□ -0.02
SF3A1-202ENST00000411423 PIPOXQ9P0Z9 390 aa14.95□□□□□ -0.02
SF3A1-202ENST00000411423 TGP01266 2768 aa14.95□□□□□ -0.02
SF3A1-202ENST00000411423 IGKV1D-8A0A087WSZ0 117 aa14.94□□□□□ -0.02
SF3A1-202ENST00000411423 H0YJW9 148 aa14.94□□□□□ -0.02
SF3A1-202ENST00000411423 NDUFA3O95167 84 aa14.94□□□□□ -0.02
SF3A1-202ENST00000411423 PF4P02776 101 aa14.94□□□□□ -0.02
SF3A1-202ENST00000411423 RPLP1P05386 114 aaKnown RBP14.94□□□□□ -0.02
SF3A1-202ENST00000411423 GSTT2P0CG29 244 aa14.94□□□□□ -0.02
SF3A1-202ENST00000411423 GSTT2BP0CG30 244 aa14.94□□□□□ -0.02
SF3A1-202ENST00000411423 CD33P20138 364 aa14.94□□□□□ -0.02
SF3A1-202ENST00000411423 ZBTB25P24278 435 aa14.94□□□□□ -0.02
SF3A1-202ENST00000411423 SOX6P35712 828 aa14.94□□□□□ -0.02
SF3A1-202ENST00000411423 LINC00482Q8N8I6 264 aa14.94□□□□□ -0.02
SF3A1-202ENST00000411423 DRAXINQ8NBI3 349 aaPredicted RBP14.94□□□□□ -0.02
SF3A1-202ENST00000411423 C5orf30Q96GV9 206 aa14.94□□□□□ -0.02
SF3A1-202ENST00000411423 DUX3Q96PT4 197 aa14.94□□□□□ -0.02
SF3A1-202ENST00000411423 RDH8Q9NYR8 311 aa14.94□□□□□ -0.02
SF3A1-202ENST00000411423 MGAT4AQ9UM21 535 aa14.94□□□□□ -0.02
SF3A1-202ENST00000411423 IGHV7-81A0A0B4J1V7 117 aa14.93□□□□□ -0.02
SF3A1-202ENST00000411423 NOTOA8MTQ0 251 aa14.93□□□□□ -0.02
SF3A1-202ENST00000411423 NBR2O15453 112 aa14.93□□□□□ -0.02
SF3A1-202ENST00000411423 HSPA12AO43301 675 aa14.93□□□□□ -0.02
SF3A1-202ENST00000411423 IGF1P05019 195 aa14.93□□□□□ -0.02
SF3A1-202ENST00000411423 GADD45AP24522 165 aa14.93□□□□□ -0.02
SF3A1-202ENST00000411423 SLC35B1P78383 322 aa14.93□□□□□ -0.02
SF3A1-202ENST00000411423 NDPQ00604 133 aa14.93□□□□□ -0.02
SF3A1-202ENST00000411423 NEDD8Q15843 81 aa14.93□□□□□ -0.02
SF3A1-202ENST00000411423 KCTD21Q4G0X4 260 aa14.93□□□□□ -0.02
SF3A1-202ENST00000411423 NPBQ8NG41 125 aa14.93□□□□□ -0.02
SF3A1-202ENST00000411423 CHCHD6Q9BRQ6 235 aa14.93□□□□□ -0.02
SF3A1-202ENST00000411423 CABLES2Q9BTV7 478 aa14.93□□□□□ -0.02
SF3A1-202ENST00000411423 TOLLIPQ9H0E2 274 aa14.93□□□□□ -0.02
SF3A1-202ENST00000411423 FBXO7Q9Y3I1 522 aa14.93□□□□□ -0.02
SF3A1-202ENST00000411423 NOTCH3Q9UM47 2321 aa14.92□□□□□ -0.02
SF3A1-202ENST00000411423 G3V318 75 aa14.92□□□□□ -0.02
SF3A1-202ENST00000411423 ATP6V0E1O15342 81 aa14.92□□□□□ -0.02
SF3A1-202ENST00000411423 FABP7O15540 132 aa14.92□□□□□ -0.02
SF3A1-202ENST00000411423 SDC2P34741 201 aa14.92□□□□□ -0.02
SF3A1-202ENST00000411423 THBS3P49746 956 aa14.92□□□□□ -0.02
SF3A1-202ENST00000411423 PNLIPRP3Q17RR3 467 aa14.92□□□□□ -0.02
SF3A1-202ENST00000411423 C5orf64Q2M2E5 130 aa14.92□□□□□ -0.02
SF3A1-202ENST00000411423 FOXB2Q5VYV0 432 aa14.92□□□□□ -0.02
SF3A1-202ENST00000411423 MRPL41Q8IXM3 137 aaKnown RBP14.92□□□□□ -0.02
SF3A1-202ENST00000411423 ZNF383Q8NA42 475 aa14.92□□□□□ -0.02
SF3A1-202ENST00000411423 KLHL30-AS1Q8NEE0 82 aa14.92□□□□□ -0.02
SF3A1-202ENST00000411423 OR5AN1Q8NGI8 311 aa14.92□□□□□ -0.02
SF3A1-202ENST00000411423 OR4A4PQ8NGN8 299 aa14.92□□□□□ -0.02
SF3A1-202ENST00000411423 KCTD7Q96MP8 289 aa14.92□□□□□ -0.02
SF3A1-202ENST00000411423 CENPOQ9BU64 300 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms