RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 C5orf24Q7Z6I8 188 aa8.73□□□□□ -1.01
CHMP3-205ENST00000409810 SAMD12Q8N8I0 201 aa8.73□□□□□ -1.01
CHMP3-205ENST00000409810 OR2T10Q8NGZ9 312 aa8.73□□□□□ -1.01
CHMP3-205ENST00000409810 RAB2BQ8WUD1 216 aa8.73□□□□□ -1.01
CHMP3-205ENST00000409810 NUDCD2Q8WVJ2 157 aa8.73□□□□□ -1.01
CHMP3-205ENST00000409810 CMTM3Q96MX0 182 aa8.73□□□□□ -1.01
CHMP3-205ENST00000409810 NAA50Q9GZZ1 169 aaKnown RBP8.73□□□□□ -1.01
CHMP3-205ENST00000409810 ABCG5Q9H222 651 aa8.73□□□□□ -1.01
CHMP3-205ENST00000409810 IFI27L2Q9H2X8 130 aa8.73□□□□□ -1.01
CHMP3-205ENST00000409810 RDH8Q9NYR8 311 aa8.73□□□□□ -1.01
CHMP3-205ENST00000409810 OR1A1Q9P1Q5 309 aa8.73□□□□□ -1.01
CHMP3-205ENST00000409810 ZNF230Q9UIE0 474 aaPredicted RBP8.73□□□□□ -1.01
CHMP3-205ENST00000409810 SMIM31A0A1B0GVY4 71 aa8.72□□□□□ -1.01
CHMP3-205ENST00000409810 BET1O15155 118 aa8.72□□□□□ -1.01
CHMP3-205ENST00000409810 FGF16O43320 207 aa8.72□□□□□ -1.01
CHMP3-205ENST00000409810 GSTT2P0CG29 244 aa8.72□□□□□ -1.01
CHMP3-205ENST00000409810 GSTT2BP0CG30 244 aa8.72□□□□□ -1.01
CHMP3-205ENST00000409810 ZNF182P17025 639 aaPredicted RBP8.72□□□□□ -1.01
CHMP3-205ENST00000409810 VDAC2P45880 294 aaPredicted RBP8.72□□□□□ -1.01
CHMP3-205ENST00000409810 PROK1P58294 105 aa8.72□□□□□ -1.01
CHMP3-205ENST00000409810 HERPUD1Q15011 391 aa8.72□□□□□ -1.01
CHMP3-205ENST00000409810 CLVS1Q8IUQ0 354 aaPredicted RBP8.72□□□□□ -1.01
CHMP3-205ENST00000409810 ODF3L1Q8IXM7 274 aa8.72□□□□□ -1.01
CHMP3-205ENST00000409810 Q8N2B8 174 aa8.72□□□□□ -1.01
CHMP3-205ENST00000409810 MAFIPQ8WZ33 124 aa8.72□□□□□ -1.01
CHMP3-205ENST00000409810 ST6GALNAC5Q9BVH7 336 aa8.72□□□□□ -1.01
CHMP3-205ENST00000409810 TOLLIPQ9H0E2 274 aa8.72□□□□□ -1.01
CHMP3-205ENST00000409810 ZNF702PQ9H963 129 aa8.72□□□□□ -1.01
CHMP3-205ENST00000409810 COMMD3Q9UBI1 195 aa8.72□□□□□ -1.01
CHMP3-205ENST00000409810 ZNF221Q9UK13 617 aa8.72□□□□□ -1.01
CHMP3-205ENST00000409810 ELF5Q9UKW6 265 aaPredicted RBP8.72□□□□□ -1.01
CHMP3-205ENST00000409810 TET2Q6N021 2002 aaPredicted RBP8.71□□□□□ -1.01
CHMP3-205ENST00000409810 TENM1Q9UKZ4 2725 aa8.71□□□□□ -1.01
CHMP3-205ENST00000409810 TRBV6-7A0A0A0MS04 114 aa8.71□□□□□ -1.02
CHMP3-205ENST00000409810 IGHV3-72A0A0B4J1Y9 119 aa8.71□□□□□ -1.02
CHMP3-205ENST00000409810 IGKV1-6A0A0C4DH72 117 aa8.71□□□□□ -1.02
CHMP3-205ENST00000409810 MOSP00540 346 aa8.71□□□□□ -1.02
CHMP3-205ENST00000409810 APOA1P02647 267 aa8.71□□□□□ -1.02
CHMP3-205ENST00000409810 CBX5P45973 191 aa8.71□□□□□ -1.02
CHMP3-205ENST00000409810 GPR12P47775 334 aa8.71□□□□□ -1.02
CHMP3-205ENST00000409810 TMBIM6P55061 237 aa8.71□□□□□ -1.02
CHMP3-205ENST00000409810 LSAMPQ13449 338 aa8.71□□□□□ -1.02
CHMP3-205ENST00000409810 EBI3Q14213 229 aa8.71□□□□□ -1.02
CHMP3-205ENST00000409810 ABCA11PQ4W5N1 156 aa8.71□□□□□ -1.02
CHMP3-205ENST00000409810 IGSF11Q5DX21 431 aa8.71□□□□□ -1.02
CHMP3-205ENST00000409810 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.71□□□□□ -1.02
CHMP3-205ENST00000409810 OR8H1Q8NGG4 311 aa8.71□□□□□ -1.02
CHMP3-205ENST00000409810 EAF1Q96JC9 268 aaPredicted RBP8.71□□□□□ -1.02
CHMP3-205ENST00000409810 MRPL20Q9BYC9 149 aaKnown RBP8.71□□□□□ -1.02
CHMP3-205ENST00000409810 C11orf54Q9H0W9 315 aaPredicted RBP8.71□□□□□ -1.02
CHMP3-205ENST00000409810 AUNIPQ9H7T9 357 aa8.71□□□□□ -1.02
CHMP3-205ENST00000409810 RBM7Q9Y580 266 aaKnown RBP8.71□□□□□ -1.02
CHMP3-205ENST00000409810 OR5H14A6NHG9 310 aa8.7□□□□□ -1.02
CHMP3-205ENST00000409810 NCBP2LA6PVI3 153 aaKnown RBP8.7□□□□□ -1.02
CHMP3-205ENST00000409810 OR3A3P47888 321 aa8.7□□□□□ -1.02
CHMP3-205ENST00000409810 TAS2R20P59543 309 aa8.7□□□□□ -1.02
CHMP3-205ENST00000409810 ARPC4P59998 168 aa8.7□□□□□ -1.02
CHMP3-205ENST00000409810 BLCAPP62952 87 aa8.7□□□□□ -1.02
CHMP3-205ENST00000409810 HNF4GQ14541 408 aa8.7□□□□□ -1.02
CHMP3-205ENST00000409810 C9orf152Q5JTZ5 239 aa8.7□□□□□ -1.02
CHMP3-205ENST00000409810 CNIH2Q6PI25 160 aa8.7□□□□□ -1.02
CHMP3-205ENST00000409810 C5orf56Q8N8D9 126 aa8.7□□□□□ -1.02
CHMP3-205ENST00000409810 SGMS2Q8NHU3 365 aa8.7□□□□□ -1.02
CHMP3-205ENST00000409810 ABHD14BQ96IU4 210 aa8.7□□□□□ -1.02
CHMP3-205ENST00000409810 CITED1Q99966 193 aa8.7□□□□□ -1.02
CHMP3-205ENST00000409810 NABP2Q9BQ15 211 aa8.7□□□□□ -1.02
CHMP3-205ENST00000409810 AGMATQ9BSE5 352 aa8.7□□□□□ -1.02
CHMP3-205ENST00000409810 OR2D2Q9H210 308 aa8.7□□□□□ -1.02
CHMP3-205ENST00000409810 IFT46Q9NQC8 304 aa8.7□□□□□ -1.02
CHMP3-205ENST00000409810 ANXA10Q9UJ72 324 aa8.7□□□□□ -1.02
CHMP3-205ENST00000409810 ADAM30Q9UKF2 790 aa8.7□□□□□ -1.02
CHMP3-205ENST00000409810 SIGLEC9Q9Y336 463 aa8.7□□□□□ -1.02
CHMP3-205ENST00000409810 FAM25AB3EWG3 89 aa8.69□□□□□ -1.02
CHMP3-205ENST00000409810 FAM25CB3EWG5 89 aa8.69□□□□□ -1.02
CHMP3-205ENST00000409810 FAM25GB3EWG6 89 aa8.69□□□□□ -1.02
CHMP3-205ENST00000409810 SSX5O60225 188 aa8.69□□□□□ -1.02
CHMP3-205ENST00000409810 EIF4EP06730 217 aaKnown RBP8.69□□□□□ -1.02
CHMP3-205ENST00000409810 VSIG10L2P0DP72 767 aa8.69□□□□□ -1.02
CHMP3-205ENST00000409810 MC5RP33032 325 aa8.69□□□□□ -1.02
CHMP3-205ENST00000409810 FBLN7Q53RD9 439 aa8.69□□□□□ -1.02
CHMP3-205ENST00000409810 RPL39P5Q59GN2 51 aa8.69□□□□□ -1.02
CHMP3-205ENST00000409810 HOGA1Q86XE5 327 aa8.69□□□□□ -1.02
CHMP3-205ENST00000409810 H1FOOQ8IZA3 346 aaPredicted RBP8.69□□□□□ -1.02
CHMP3-205ENST00000409810 Q8N6K4 173 aa8.69□□□□□ -1.02
CHMP3-205ENST00000409810 KLHDC1Q8N7A1 406 aa8.69□□□□□ -1.02
CHMP3-205ENST00000409810 BEST4Q8NFU0 473 aa8.69□□□□□ -1.02
CHMP3-205ENST00000409810 PARP12Q9H0J9 701 aaKnown RBP8.69□□□□□ -1.02
CHMP3-205ENST00000409810 SERTAD4Q9NUC0 356 aa8.69□□□□□ -1.02
CHMP3-205ENST00000409810 LIN7CQ9NUP9 197 aaKnown RBP8.69□□□□□ -1.02
CHMP3-205ENST00000409810 GAB2Q9UQC2 676 aa8.69□□□□□ -1.02
CHMP3-205ENST00000409810 IGKV1D-8A0A087WSZ0 117 aa8.68□□□□□ -1.02
CHMP3-205ENST00000409810 KCNAB3O43448 404 aa8.68□□□□□ -1.02
CHMP3-205ENST00000409810 HPGDSO60760 199 aa8.68□□□□□ -1.02
CHMP3-205ENST00000409810 RBBP9O75884 186 aa8.68□□□□□ -1.02
CHMP3-205ENST00000409810 SLC22A5O76082 557 aa8.68□□□□□ -1.02
CHMP3-205ENST00000409810 APOA2P02652 100 aa8.68□□□□□ -1.02
CHMP3-205ENST00000409810 AMY1AP04745 511 aa8.68□□□□□ -1.02
CHMP3-205ENST00000409810 AMY2AP04746 511 aa8.68□□□□□ -1.02
CHMP3-205ENST00000409810 OR8U9P0C7N5 309 aa8.68□□□□□ -1.02
CHMP3-205ENST00000409810 CBX3Q13185 183 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms