RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 DTYMKP23919 212 aa24.8■■□□□ 1.56
TRAF3IP1-203ENST00000409739 VDAC2P45880 294 aaPredicted RBP24.8■■□□□ 1.56
TRAF3IP1-203ENST00000409739 SRSF7Q16629 238 aaKnown RBP eCLIP24.8■■□□□ 1.56
TRAF3IP1-203ENST00000409739 Q6ZS49 121 aa24.8■■□□□ 1.56
TRAF3IP1-203ENST00000409739 C5orf56Q8N8D9 126 aa24.8■■□□□ 1.56
TRAF3IP1-203ENST00000409739 OR2T10Q8NGZ9 312 aa24.8■■□□□ 1.56
TRAF3IP1-203ENST00000409739 NUDCD2Q8WVJ2 157 aa24.8■■□□□ 1.56
TRAF3IP1-203ENST00000409739 SLC25A46Q96AG3 418 aa24.8■■□□□ 1.56
TRAF3IP1-203ENST00000409739 AGMATQ9BSE5 352 aa24.8■■□□□ 1.56
TRAF3IP1-203ENST00000409739 NAA50Q9GZZ1 169 aaKnown RBP24.8■■□□□ 1.56
TRAF3IP1-203ENST00000409739 C11orf54Q9H0W9 315 aaPredicted RBP24.8■■□□□ 1.56
TRAF3IP1-203ENST00000409739 PIPOXQ9P0Z9 390 aa24.8■■□□□ 1.56
TRAF3IP1-203ENST00000409739 PKD1L1Q8TDX9 2849 aa24.79■■□□□ 1.56
TRAF3IP1-203ENST00000409739 GABARAPO95166 117 aa24.79■■□□□ 1.56
TRAF3IP1-203ENST00000409739 ALDH3B2P48448 385 aa24.79■■□□□ 1.56
TRAF3IP1-203ENST00000409739 IGSF11Q5DX21 431 aa24.79■■□□□ 1.56
TRAF3IP1-203ENST00000409739 FAM71F2Q6NXP2 309 aa24.79■■□□□ 1.56
TRAF3IP1-203ENST00000409739 ANKRD13BQ86YJ7 626 aa24.79■■□□□ 1.56
TRAF3IP1-203ENST00000409739 PHF21AQ96BD5 680 aa24.79■■□□□ 1.56
TRAF3IP1-203ENST00000409739 RBMXL1Q96E39 390 aaKnown RBP24.79■■□□□ 1.56
TRAF3IP1-203ENST00000409739 ABHD14BQ96IU4 210 aa24.79■■□□□ 1.56
TRAF3IP1-203ENST00000409739 NABP2Q9BQ15 211 aa24.79■■□□□ 1.56
TRAF3IP1-203ENST00000409739 ZNF251Q9BRH9 671 aa24.79■■□□□ 1.56
TRAF3IP1-203ENST00000409739 WNK1Q9H4A3 2382 aa24.79■■□□□ 1.56
TRAF3IP1-203ENST00000409739 IGKV1D-8A0A087WSZ0 117 aa24.78■■□□□ 1.56
TRAF3IP1-203ENST00000409739 A0A0A6YYH2 397 aa24.78■■□□□ 1.56
TRAF3IP1-203ENST00000409739 A6NJ64 397 aa24.78■■□□□ 1.56
TRAF3IP1-203ENST00000409739 RAB29O14966 203 aa24.78■■□□□ 1.56
TRAF3IP1-203ENST00000409739 FGF16O43320 207 aa24.78■■□□□ 1.56
TRAF3IP1-203ENST00000409739 TFAP2AP05549 437 aa24.78■■□□□ 1.56
TRAF3IP1-203ENST00000409739 PNLIPRP3Q17RR3 467 aa24.78■■□□□ 1.56
TRAF3IP1-203ENST00000409739 WNT10AQ9GZT5 417 aa24.78■■□□□ 1.56
TRAF3IP1-203ENST00000409739 TOLLIPQ9H0E2 274 aa24.78■■□□□ 1.56
TRAF3IP1-203ENST00000409739 RDH8Q9NYR8 311 aa24.78■■□□□ 1.56
TRAF3IP1-203ENST00000409739 BET1O15155 118 aa24.77■■□□□ 1.56
TRAF3IP1-203ENST00000409739 DIRAS3O95661 229 aa24.77■■□□□ 1.56
TRAF3IP1-203ENST00000409739 MOSP00540 346 aa24.77■■□□□ 1.56
TRAF3IP1-203ENST00000409739 GNG2P59768 71 aa24.77■■□□□ 1.56
TRAF3IP1-203ENST00000409739 PITPNAQ00169 270 aa24.77■■□□□ 1.56
TRAF3IP1-203ENST00000409739 CTF1Q16619 201 aa24.77■■□□□ 1.56
TRAF3IP1-203ENST00000409739 RPL39P5Q59GN2 51 aa24.77■■□□□ 1.56
TRAF3IP1-203ENST00000409739 SSX5O60225 188 aa24.76■■□□□ 1.55
TRAF3IP1-203ENST00000409739 PRR31Q5SQ13 230 aa24.76■■□□□ 1.55
TRAF3IP1-203ENST00000409739 GPR107Q5VW38 600 aa24.76■■□□□ 1.55
TRAF3IP1-203ENST00000409739 WIPF2Q8TF74 440 aaPredicted RBP24.76■■□□□ 1.55
TRAF3IP1-203ENST00000409739 S1PR3Q99500 378 aa24.76■■□□□ 1.55
TRAF3IP1-203ENST00000409739 TRAV18A0A075B6X5 111 aa24.75■■□□□ 1.55
TRAF3IP1-203ENST00000409739 TRBV6-7A0A0A0MS04 114 aa24.75■■□□□ 1.55
TRAF3IP1-203ENST00000409739 C9orf152Q5JTZ5 239 aa24.75■■□□□ 1.55
TRAF3IP1-203ENST00000409739 UBE2NLQ5JXB2 153 aa24.75■■□□□ 1.55
TRAF3IP1-203ENST00000409739 OR10J5Q8NHC4 309 aa24.75■■□□□ 1.55
TRAF3IP1-203ENST00000409739 ABCG5Q9H222 651 aa24.75■■□□□ 1.55
TRAF3IP1-203ENST00000409739 DCSTAMPQ9H295 470 aa24.75■■□□□ 1.55
TRAF3IP1-203ENST00000409739 PEX14O75381 377 aa24.74■■□□□ 1.55
TRAF3IP1-203ENST00000409739 GPR141Q7Z602 305 aa24.74■■□□□ 1.55
TRAF3IP1-203ENST00000409739 C11orf44Q8N8P7 122 aa24.74■■□□□ 1.55
TRAF3IP1-203ENST00000409739 KCTD12Q96CX2 325 aaKnown RBP24.74■■□□□ 1.55
TRAF3IP1-203ENST00000409739 ST6GALNAC5Q9BVH7 336 aa24.74■■□□□ 1.55
TRAF3IP1-203ENST00000409739 GHITMQ9H3K2 345 aa24.74■■□□□ 1.55
TRAF3IP1-203ENST00000409739 DIABLOQ9NR28 239 aa24.74■■□□□ 1.55
TRAF3IP1-203ENST00000409739 PLSCR3Q9NRY6 295 aa24.74■■□□□ 1.55
TRAF3IP1-203ENST00000409739 VWFP04275 2813 aa24.73■■□□□ 1.55
TRAF3IP1-203ENST00000409739 NBEAL1Q6ZS30 2694 aa24.73■■□□□ 1.55
TRAF3IP1-203ENST00000409739 HIST2H2BDQ6DRA6 164 aa24.73■■□□□ 1.55
TRAF3IP1-203ENST00000409739 SAMD12Q8N8I0 201 aa24.73■■□□□ 1.55
TRAF3IP1-203ENST00000409739 RNF150Q9ULK6 438 aa24.73■■□□□ 1.55
TRAF3IP1-203ENST00000409739 NCBP2LA6PVI3 153 aaKnown RBP24.72■■□□□ 1.55
TRAF3IP1-203ENST00000409739 Q8N9W7 124 aa24.72■■□□□ 1.55
TRAF3IP1-203ENST00000409739 CT45A6P0DMU7 189 aa24.71■■□□□ 1.55
TRAF3IP1-203ENST00000409739 CT45A5P0DMU8 189 aa24.71■■□□□ 1.55
TRAF3IP1-203ENST00000409739 CT45A7P0DMV0 189 aa24.71■■□□□ 1.55
TRAF3IP1-203ENST00000409739 OR8H1Q8NGG4 311 aa24.71■■□□□ 1.55
TRAF3IP1-203ENST00000409739 GINS4Q9BRT9 223 aa24.71■■□□□ 1.55
TRAF3IP1-203ENST00000409739 AUNIPQ9H7T9 357 aa24.71■■□□□ 1.55
TRAF3IP1-203ENST00000409739 ZNF221Q9UK13 617 aa24.71■■□□□ 1.55
TRAF3IP1-203ENST00000409739 MGAM2Q2M2H8 2515 aa24.7■■□□□ 1.54
TRAF3IP1-203ENST00000409739 XRCC3O43542 346 aa24.7■■□□□ 1.54
TRAF3IP1-203ENST00000409739 PROP1O75360 226 aa24.7■■□□□ 1.54
TRAF3IP1-203ENST00000409739 FBXO24O75426 580 aa24.7■■□□□ 1.54
TRAF3IP1-203ENST00000409739 GPR12P47775 334 aa24.7■■□□□ 1.54
TRAF3IP1-203ENST00000409739 F2RL1P55085 397 aa24.7■■□□□ 1.54
TRAF3IP1-203ENST00000409739 FAM131AQ6UXB0 335 aa24.7■■□□□ 1.54
TRAF3IP1-203ENST00000409739 S100A16Q96FQ6 103 aaKnown RBP24.7■■□□□ 1.54
TRAF3IP1-203ENST00000409739 M0QZ24 198 aa24.69■■□□□ 1.54
TRAF3IP1-203ENST00000409739 PTHLHP12272 177 aa24.69■■□□□ 1.54
TRAF3IP1-203ENST00000409739 GLDNQ6ZMI3 551 aaPredicted RBP24.69■■□□□ 1.54
TRAF3IP1-203ENST00000409739 H1FOOQ8IZA3 346 aaPredicted RBP24.69■■□□□ 1.54
TRAF3IP1-203ENST00000409739 LIN7CQ9NUP9 197 aaKnown RBP24.69■■□□□ 1.54
TRAF3IP1-203ENST00000409739 CD28P10747 220 aa24.68■■□□□ 1.54
TRAF3IP1-203ENST00000409739 FAM71E2Q8N5Q1 922 aa24.68■■□□□ 1.54
TRAF3IP1-203ENST00000409739 OR2D2Q9H210 308 aa24.68■■□□□ 1.54
TRAF3IP1-203ENST00000409739 OR5H14A6NHG9 310 aa24.67■■□□□ 1.54
TRAF3IP1-203ENST00000409739 H0YJW9 148 aa24.67■■□□□ 1.54
TRAF3IP1-203ENST00000409739 OR8U9P0C7N5 309 aa24.67■■□□□ 1.54
TRAF3IP1-203ENST00000409739 RORCP51449 518 aa24.67■■□□□ 1.54
TRAF3IP1-203ENST00000409739 ACTBP60709 375 aa24.67■■□□□ 1.54
TRAF3IP1-203ENST00000409739 ZNF436-AS1Q8NC38 126 aaPredicted RBP24.67■■□□□ 1.54
TRAF3IP1-203ENST00000409739 OR8U1Q8NH10 309 aa24.67■■□□□ 1.54
TRAF3IP1-203ENST00000409739 RITA1Q96K30 269 aa24.67■■□□□ 1.54
TRAF3IP1-203ENST00000409739 COMMD3Q9UBI1 195 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms