RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 DNLZQ5SXM8 178 aa9.05□□□□□ -0.96
CLIP4-204ENST00000404424 WDR25Q64LD2 544 aaPredicted RBP9.05□□□□□ -0.96
CLIP4-204ENST00000404424 SPNS3Q6ZMD2 512 aa9.05□□□□□ -0.96
CLIP4-204ENST00000404424 TCTEX1D1Q8N7M0 179 aa9.05□□□□□ -0.96
CLIP4-204ENST00000404424 MDS2Q8NDY4 140 aa9.05□□□□□ -0.96
CLIP4-204ENST00000404424 LHX4Q969G2 390 aa9.05□□□□□ -0.96
CLIP4-204ENST00000404424 CDX2Q99626 313 aaPredicted RBP9.05□□□□□ -0.96
CLIP4-204ENST00000404424 NAT8Q9UHE5 227 aa9.05□□□□□ -0.96
CLIP4-204ENST00000404424 ZNF407Q9C0G0 2248 aa9.05□□□□□ -0.96
CLIP4-204ENST00000404424 CFAP54Q96N23 3096 aa9.05□□□□□ -0.96
CLIP4-204ENST00000404424 ARHGAP21Q5T5U3 1957 aa9.05□□□□□ -0.96
CLIP4-204ENST00000404424 ZNF729A6NN14 1252 aaPredicted RBP9.05□□□□□ -0.96
CLIP4-204ENST00000404424 IQCF6A8MYZ5 107 aa9.05□□□□□ -0.96
CLIP4-204ENST00000404424 PTBP3O95758 552 aaKnown RBP9.05□□□□□ -0.96
CLIP4-204ENST00000404424 CLDN1O95832 211 aa9.05□□□□□ -0.96
CLIP4-204ENST00000404424 TRGC1P0CF51 173 aa9.05□□□□□ -0.96
CLIP4-204ENST00000404424 CATR1Q13166 79 aa9.05□□□□□ -0.96
CLIP4-204ENST00000404424 GALMQ96C23 342 aa9.05□□□□□ -0.96
CLIP4-204ENST00000404424 WDYHV1Q96HA8 205 aa9.05□□□□□ -0.96
CLIP4-204ENST00000404424 FER1L6-AS2Q96M78 137 aa9.05□□□□□ -0.96
CLIP4-204ENST00000404424 OR2J1Q9GZK6 312 aa9.05□□□□□ -0.96
CLIP4-204ENST00000404424 RBKSQ9H477 322 aa9.05□□□□□ -0.96
CLIP4-204ENST00000404424 CDH20Q9HBT6 801 aa9.05□□□□□ -0.96
CLIP4-204ENST00000404424 UBE2L5PA0A1B0GUS4 154 aa9.04□□□□□ -0.96
CLIP4-204ENST00000404424 TMEM30CPA0ZSE6 113 aa9.04□□□□□ -0.96
CLIP4-204ENST00000404424 TMEM250H0YL14 139 aa9.04□□□□□ -0.96
CLIP4-204ENST00000404424 HAND1O96004 215 aa9.04□□□□□ -0.96
CLIP4-204ENST00000404424 CD46P15529 392 aa9.04□□□□□ -0.96
CLIP4-204ENST00000404424 TGFBR3Q03167 851 aa9.04□□□□□ -0.96
CLIP4-204ENST00000404424 ESPL1Q14674 2120 aa9.04□□□□□ -0.96
CLIP4-204ENST00000404424 ZNF766Q5HY98 468 aa9.04□□□□□ -0.96
CLIP4-204ENST00000404424 HIST3H2BBQ8N257 126 aa9.04□□□□□ -0.96
CLIP4-204ENST00000404424 RPP25LQ8N5L8 163 aaKnown RBP9.04□□□□□ -0.96
CLIP4-204ENST00000404424 ABHD5Q8WTS1 349 aa9.04□□□□□ -0.96
CLIP4-204ENST00000404424 HES4Q9HCC6 221 aa9.04□□□□□ -0.96
CLIP4-204ENST00000404424 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.04□□□□□ -0.96
CLIP4-204ENST00000404424 TINAGQ9UJW2 476 aa9.04□□□□□ -0.96
CLIP4-204ENST00000404424 CTXND1A0A1B0GTU2 59 aa9.04□□□□□ -0.96
CLIP4-204ENST00000404424 OOEPA6NGQ2 149 aa9.04□□□□□ -0.96
CLIP4-204ENST00000404424 GATCO43716 136 aaKnown RBP9.04□□□□□ -0.96
CLIP4-204ENST00000404424 P0C879 139 aa9.04□□□□□ -0.96
CLIP4-204ENST00000404424 ELLP55199 621 aaPredicted RBP9.04□□□□□ -0.96
CLIP4-204ENST00000404424 UBE2NP61088 152 aaKnown RBP9.04□□□□□ -0.96
CLIP4-204ENST00000404424 MEF2BQ02080 365 aaPredicted RBP9.04□□□□□ -0.96
CLIP4-204ENST00000404424 OR8G2PQ6IF36 304 aa9.04□□□□□ -0.96
CLIP4-204ENST00000404424 CYP2G1PQ6ZSU1 146 aa9.04□□□□□ -0.96
CLIP4-204ENST00000404424 FRZBQ92765 325 aa9.04□□□□□ -0.96
CLIP4-204ENST00000404424 CIB3Q96Q77 187 aaPredicted RBP9.04□□□□□ -0.96
CLIP4-204ENST00000404424 TMEM147Q9BVK8 224 aa9.04□□□□□ -0.96
CLIP4-204ENST00000404424 MRPL37Q9BZE1 423 aaKnown RBP9.04□□□□□ -0.96
CLIP4-204ENST00000404424 TRGV5A0A0B4J1U4 118 aa9.03□□□□□ -0.96
CLIP4-204ENST00000404424 LRRC30A6NM36 301 aa9.03□□□□□ -0.96
CLIP4-204ENST00000404424 PSMB3P49720 205 aa9.03□□□□□ -0.96
CLIP4-204ENST00000404424 EIF4EBP1Q13541 118 aaPredicted RBP9.03□□□□□ -0.96
CLIP4-204ENST00000404424 IGFBP7Q16270 282 aa9.03□□□□□ -0.96
CLIP4-204ENST00000404424 TMEM241Q24JQ0 296 aa9.03□□□□□ -0.96
CLIP4-204ENST00000404424 OR2B11Q5JQS5 317 aa9.03□□□□□ -0.96
CLIP4-204ENST00000404424 NCR3LG1Q68D85 454 aa9.03□□□□□ -0.96
CLIP4-204ENST00000404424 SLC35E4Q6ICL7 350 aa9.03□□□□□ -0.96
CLIP4-204ENST00000404424 OR10D4PQ8NGN7 298 aa9.03□□□□□ -0.96
CLIP4-204ENST00000404424 UBALD1Q8TB05 177 aa9.03□□□□□ -0.96
CLIP4-204ENST00000404424 GMPPAQ96IJ6 420 aaPredicted RBP9.03□□□□□ -0.96
CLIP4-204ENST00000404424 SMIM7Q9BQ49 75 aa9.03□□□□□ -0.96
CLIP4-204ENST00000404424 LAMP3Q9UQV4 416 aa9.03□□□□□ -0.96
CLIP4-204ENST00000404424 OR5H1A6NKK0 313 aa9.03□□□□□ -0.96
CLIP4-204ENST00000404424 C1QTNF9BB2RNN3 333 aa9.03□□□□□ -0.96
CLIP4-204ENST00000404424 PHOX2AO14813 284 aa9.03□□□□□ -0.96
CLIP4-204ENST00000404424 KBTBD11O94819 623 aa9.03□□□□□ -0.96
CLIP4-204ENST00000404424 SOD3P08294 240 aa9.03□□□□□ -0.96
CLIP4-204ENST00000404424 IL2RGP31785 369 aa9.03□□□□□ -0.96
CLIP4-204ENST00000404424 OR3A1P47881 315 aa9.03□□□□□ -0.96
CLIP4-204ENST00000404424 LPAL2Q16609 132 aa9.03□□□□□ -0.96
CLIP4-204ENST00000404424 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.03□□□□□ -0.96
CLIP4-204ENST00000404424 OR10P1Q8NGE3 313 aa9.03□□□□□ -0.96
CLIP4-204ENST00000404424 SLC25A40Q8TBP6 338 aa9.03□□□□□ -0.96
CLIP4-204ENST00000404424 NINJ1Q92982 152 aa9.03□□□□□ -0.96
CLIP4-204ENST00000404424 OR2D2Q9H210 308 aa9.03□□□□□ -0.96
CLIP4-204ENST00000404424 MANBALQ9NQG1 85 aa9.03□□□□□ -0.96
CLIP4-204ENST00000404424 DNAJC13O75165 2243 aa9.02□□□□□ -0.96
CLIP4-204ENST00000404424 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.02□□□□□ -0.97
CLIP4-204ENST00000404424 A0A1W2PNU3 283 aaPredicted RBP9.02□□□□□ -0.97
CLIP4-204ENST00000404424 ODAMA1E959 279 aa9.02□□□□□ -0.97
CLIP4-204ENST00000404424 RAB29O14966 203 aa9.02□□□□□ -0.97
CLIP4-204ENST00000404424 PSPNO60542 156 aa9.02□□□□□ -0.97
CLIP4-204ENST00000404424 KRASP01116 189 aa9.02□□□□□ -0.97
CLIP4-204ENST00000404424 IGKV1D-33P01593 117 aa9.02□□□□□ -0.97
CLIP4-204ENST00000404424 IGKV1-33P01594 117 aa9.02□□□□□ -0.97
CLIP4-204ENST00000404424 MPLP40238 635 aa9.02□□□□□ -0.97
CLIP4-204ENST00000404424 BEND4Q6ZU67 534 aa9.02□□□□□ -0.97
CLIP4-204ENST00000404424 OR10A7Q8NGE5 316 aa9.02□□□□□ -0.97
CLIP4-204ENST00000404424 OR1L1Q8NH94 360 aa9.02□□□□□ -0.97
CLIP4-204ENST00000404424 PFDN5Q99471 154 aa9.02□□□□□ -0.97
CLIP4-204ENST00000404424 GPR61Q9BZJ8 451 aa9.02□□□□□ -0.97
CLIP4-204ENST00000404424 DEFB127Q9H1M4 99 aa9.02□□□□□ -0.97
CLIP4-204ENST00000404424 SRD5A3Q9H8P0 318 aa9.02□□□□□ -0.97
CLIP4-204ENST00000404424 PITPNC1Q9UKF7 332 aa9.02□□□□□ -0.97
CLIP4-204ENST00000404424 MED12LQ86YW9 2145 aa9.02□□□□□ -0.97
CLIP4-204ENST00000404424 PMS2P5A8MQ11 134 aa9.02□□□□□ -0.97
CLIP4-204ENST00000404424 ZNF891A8MT65 544 aaPredicted RBP9.02□□□□□ -0.97
CLIP4-204ENST00000404424 C12orf77C9JDV5 145 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms