RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 NDUFA11Q86Y39 141 aa13.21□□□□□ -0.29
APTR-201ENST00000398043 FAM71E2Q8N5Q1 922 aa13.21□□□□□ -0.29
APTR-201ENST00000398043 LGALS14Q8TCE9 139 aa13.21□□□□□ -0.29
APTR-201ENST00000398043 CABLES2Q9BTV7 478 aa13.21□□□□□ -0.29
APTR-201ENST00000398043 C11orf54Q9H0W9 315 aaPredicted RBP13.21□□□□□ -0.29
APTR-201ENST00000398043 ATG5Q9H1Y0 275 aa13.21□□□□□ -0.29
APTR-201ENST00000398043 LIN7CQ9NUP9 197 aaKnown RBP13.21□□□□□ -0.29
APTR-201ENST00000398043 MEGF8Q7Z7M0 2845 aa13.21□□□□□ -0.3
APTR-201ENST00000398043 LINC01548A6NM66 108 aa13.2□□□□□ -0.3
APTR-201ENST00000398043 RAB29O14966 203 aa13.2□□□□□ -0.3
APTR-201ENST00000398043 PEX14O75381 377 aa13.2□□□□□ -0.3
APTR-201ENST00000398043 TGFBR1P36897 503 aa13.2□□□□□ -0.3
APTR-201ENST00000398043 CEACAM6P40199 344 aa13.2□□□□□ -0.3
APTR-201ENST00000398043 OR8H1Q8NGG4 311 aa13.2□□□□□ -0.3
APTR-201ENST00000398043 OR4A4PQ8NGN8 299 aa13.2□□□□□ -0.3
APTR-201ENST00000398043 OR5H6Q8NGV6 325 aa13.2□□□□□ -0.3
APTR-201ENST00000398043 SLC25A38Q96DW6 304 aa13.2□□□□□ -0.3
APTR-201ENST00000398043 RITA1Q96K30 269 aa13.2□□□□□ -0.3
APTR-201ENST00000398043 S1PR3Q99500 378 aa13.2□□□□□ -0.3
APTR-201ENST00000398043 ABCG5Q9H222 651 aa13.2□□□□□ -0.3
APTR-201ENST00000398043 PIPOXQ9P0Z9 390 aa13.2□□□□□ -0.3
APTR-201ENST00000398043 TNCP24821 2201 aa13.19□□□□□ -0.3
APTR-201ENST00000398043 FABP7O15540 132 aa13.19□□□□□ -0.3
APTR-201ENST00000398043 DIRAS3O95661 229 aa13.19□□□□□ -0.3
APTR-201ENST00000398043 GSTT2P0CG29 244 aa13.19□□□□□ -0.3
APTR-201ENST00000398043 GSTT2BP0CG30 244 aa13.19□□□□□ -0.3
APTR-201ENST00000398043 CT45A6P0DMU7 189 aa13.19□□□□□ -0.3
APTR-201ENST00000398043 CT45A5P0DMU8 189 aa13.19□□□□□ -0.3
APTR-201ENST00000398043 CT45A7P0DMV0 189 aa13.19□□□□□ -0.3
APTR-201ENST00000398043 RPL39P5Q59GN2 51 aa13.19□□□□□ -0.3
APTR-201ENST00000398043 C9orf152Q5JTZ5 239 aa13.19□□□□□ -0.3
APTR-201ENST00000398043 CENPVQ7Z7K6 275 aaPredicted RBP13.19□□□□□ -0.3
APTR-201ENST00000398043 ABHD14BQ96IU4 210 aa13.19□□□□□ -0.3
APTR-201ENST00000398043 GHITMQ9H3K2 345 aa13.19□□□□□ -0.3
APTR-201ENST00000398043 ZNF230Q9UIE0 474 aaPredicted RBP13.19□□□□□ -0.3
APTR-201ENST00000398043 A0A075B6Q4 140 aa13.18□□□□□ -0.3
APTR-201ENST00000398043 IGKV1D-8A0A087WSZ0 117 aa13.18□□□□□ -0.3
APTR-201ENST00000398043 TRBV6-7A0A0A0MS04 114 aa13.18□□□□□ -0.3
APTR-201ENST00000398043 NCBP2LA6PVI3 153 aaKnown RBP13.18□□□□□ -0.3
APTR-201ENST00000398043 KIR2DS1Q14954 304 aa13.18□□□□□ -0.3
APTR-201ENST00000398043 ARL6IP1Q15041 203 aa13.18□□□□□ -0.3
APTR-201ENST00000398043 TIMM50Q3ZCQ8 353 aa13.18□□□□□ -0.3
APTR-201ENST00000398043 ZNF260Q3ZCT1 412 aa13.18□□□□□ -0.3
APTR-201ENST00000398043 CDNFQ49AH0 187 aa13.18□□□□□ -0.3
APTR-201ENST00000398043 IGSF11Q5DX21 431 aa13.18□□□□□ -0.3
APTR-201ENST00000398043 HACD4Q5VWC8 232 aa13.18□□□□□ -0.3
APTR-201ENST00000398043 FAM110DQ8TAY7 271 aaPredicted RBP13.18□□□□□ -0.3
APTR-201ENST00000398043 EDARADDQ8WWZ3 215 aa13.18□□□□□ -0.3
APTR-201ENST00000398043 MAFIPQ8WZ33 124 aa13.18□□□□□ -0.3
APTR-201ENST00000398043 NOL4LQ96MY1 436 aaPredicted RBP13.18□□□□□ -0.3
APTR-201ENST00000398043 RHBDL2Q9NX52 303 aa13.18□□□□□ -0.3
APTR-201ENST00000398043 RDH8Q9NYR8 311 aa13.18□□□□□ -0.3
APTR-201ENST00000398043 ETV7Q9Y603 341 aa13.18□□□□□ -0.3
APTR-201ENST00000398043 HSPA12AO43301 675 aa13.17□□□□□ -0.3
APTR-201ENST00000398043 AIREO43918 545 aa13.17□□□□□ -0.3
APTR-201ENST00000398043 TMEM127O75204 238 aa13.17□□□□□ -0.3
APTR-201ENST00000398043 OPN1MWP04001 364 aa13.17□□□□□ -0.3
APTR-201ENST00000398043 SMIM18P0DKX4 95 aa13.17□□□□□ -0.3
APTR-201ENST00000398043 OPN1MW2P0DN77 364 aa13.17□□□□□ -0.3
APTR-201ENST00000398043 OPN1MW3P0DN78 364 aa13.17□□□□□ -0.3
APTR-201ENST00000398043 DTYMKP23919 212 aa13.17□□□□□ -0.3
APTR-201ENST00000398043 GPR12P47775 334 aa13.17□□□□□ -0.3
APTR-201ENST00000398043 SERPINB10P48595 397 aa13.17□□□□□ -0.3
APTR-201ENST00000398043 OR5AN1Q8NGI8 311 aa13.17□□□□□ -0.3
APTR-201ENST00000398043 VCX3AQ9NNX9 186 aa13.17□□□□□ -0.3
APTR-201ENST00000398043 H0YJW9 148 aa13.16□□□□□ -0.3
APTR-201ENST00000398043 SSX5O60225 188 aa13.16□□□□□ -0.3
APTR-201ENST00000398043 SCGNO76038 276 aa13.16□□□□□ -0.3
APTR-201ENST00000398043 GSTP1P09211 210 aaKnown RBP13.16□□□□□ -0.3
APTR-201ENST00000398043 CNTFRP26992 372 aa13.16□□□□□ -0.3
APTR-201ENST00000398043 RPS19P39019 145 aaKnown RBP13.16□□□□□ -0.3
APTR-201ENST00000398043 ACTBP60709 375 aa13.16□□□□□ -0.3
APTR-201ENST00000398043 MRPS15P82914 257 aaKnown RBP13.16□□□□□ -0.3
APTR-201ENST00000398043 ARFRP1Q13795 201 aa13.16□□□□□ -0.3
APTR-201ENST00000398043 NSUN5P1Q3KNT7 163 aa13.16□□□□□ -0.3
APTR-201ENST00000398043 IDNKQ5T6J7 187 aa13.16□□□□□ -0.3
APTR-201ENST00000398043 SLC35E3Q7Z769 313 aa13.16□□□□□ -0.3
APTR-201ENST00000398043 NPBQ8NG41 125 aa13.16□□□□□ -0.3
APTR-201ENST00000398043 CHPT1Q8WUD6 406 aa13.16□□□□□ -0.3
APTR-201ENST00000398043 HSPB9Q9BQS6 159 aa13.16□□□□□ -0.3
APTR-201ENST00000398043 GAB2Q9UQC2 676 aa13.16□□□□□ -0.3
APTR-201ENST00000398043 PSMB11A5LHX3 300 aa13.15□□□□□ -0.3
APTR-201ENST00000398043 TMEM235A6NFC5 223 aa13.15□□□□□ -0.3
APTR-201ENST00000398043 OR5H14A6NHG9 310 aa13.15□□□□□ -0.3
APTR-201ENST00000398043 NDUFA3O95167 84 aa13.15□□□□□ -0.3
APTR-201ENST00000398043 FAM131AQ6UXB0 335 aa13.15□□□□□ -0.3
APTR-201ENST00000398043 ZNF329Q86UD4 541 aa13.15□□□□□ -0.3
APTR-201ENST00000398043 H1FOOQ8IZA3 346 aaPredicted RBP13.15□□□□□ -0.3
APTR-201ENST00000398043 STPG2Q8N412 459 aa13.15□□□□□ -0.3
APTR-201ENST00000398043 OR13F1Q8NGS4 319 aa13.15□□□□□ -0.3
APTR-201ENST00000398043 PHF21AQ96BD5 680 aa13.15□□□□□ -0.3
APTR-201ENST00000398043 C5orf30Q96GV9 206 aa13.15□□□□□ -0.3
APTR-201ENST00000398043 FUNDC2Q9BWH2 189 aa13.15□□□□□ -0.3
APTR-201ENST00000398043 DCSTAMPQ9H295 470 aa13.15□□□□□ -0.3
APTR-201ENST00000398043 LINC00527Q9UJ94 153 aa13.15□□□□□ -0.3
APTR-201ENST00000398043 ZNF580Q9UK33 172 aa13.15□□□□□ -0.3
APTR-201ENST00000398043 RNF150Q9ULK6 438 aa13.15□□□□□ -0.3
APTR-201ENST00000398043 SPATA2Q9UM82 520 aa13.15□□□□□ -0.3
APTR-201ENST00000398043 AP4M1O00189 453 aa13.14□□□□□ -0.31
APTR-201ENST00000398043 BET1O15155 118 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms