RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 C2orf76Q3KRA6 126 aa6.91□□□□□ -1.3
ATG4A-205ENST00000394892 ASPHD1Q5U4P2 390 aa6.91□□□□□ -1.3
ATG4A-205ENST00000394892 TRAT1Q6PIZ9 186 aa6.91□□□□□ -1.3
ATG4A-205ENST00000394892 GLDNQ6ZMI3 551 aaPredicted RBP6.91□□□□□ -1.3
ATG4A-205ENST00000394892 C5orf30Q96GV9 206 aa6.91□□□□□ -1.3
ATG4A-205ENST00000394892 ARHGAP5-AS1Q96IT6 56 aa6.91□□□□□ -1.3
ATG4A-205ENST00000394892 ABHD14BQ96IU4 210 aa6.91□□□□□ -1.3
ATG4A-205ENST00000394892 PECRQ9BY49 303 aa6.91□□□□□ -1.3
ATG4A-205ENST00000394892 C11orf54Q9H0W9 315 aaPredicted RBP6.91□□□□□ -1.3
ATG4A-205ENST00000394892 VCXQ9H320 206 aa6.91□□□□□ -1.3
ATG4A-205ENST00000394892 ZFP57Q9NU63 452 aa6.91□□□□□ -1.3
ATG4A-205ENST00000394892 KMT2CQ8NEZ4 4911 aaKnown RBP6.91□□□□□ -1.3
ATG4A-205ENST00000394892 TMEM272A0A1B0GTI8 110 aa6.9□□□□□ -1.3
ATG4A-205ENST00000394892 TXNL1O43396 289 aa6.9□□□□□ -1.3
ATG4A-205ENST00000394892 SOX15O60248 233 aa6.9□□□□□ -1.3
ATG4A-205ENST00000394892 NDUFA3O95167 84 aa6.9□□□□□ -1.3
ATG4A-205ENST00000394892 CD3GP09693 182 aa6.9□□□□□ -1.3
ATG4A-205ENST00000394892 CALRP27797 417 aaKnown RBP6.9□□□□□ -1.3
ATG4A-205ENST00000394892 SOX6P35712 828 aa6.9□□□□□ -1.3
ATG4A-205ENST00000394892 MYCNOSP40205 109 aa6.9□□□□□ -1.3
ATG4A-205ENST00000394892 VEGFCP49767 419 aa6.9□□□□□ -1.3
ATG4A-205ENST00000394892 FOXE3Q13461 319 aa6.9□□□□□ -1.3
ATG4A-205ENST00000394892 MMDQ15546 238 aa6.9□□□□□ -1.3
ATG4A-205ENST00000394892 TBCEQ15813 527 aaPredicted RBP6.9□□□□□ -1.3
ATG4A-205ENST00000394892 TEX38Q6PEX7 206 aa6.9□□□□□ -1.3
ATG4A-205ENST00000394892 CD200R1LQ6Q8B3 271 aa6.9□□□□□ -1.3
ATG4A-205ENST00000394892 ZNF695Q8IW36 515 aa6.9□□□□□ -1.3
ATG4A-205ENST00000394892 FOXRED2Q8IWF2 684 aa6.9□□□□□ -1.3
ATG4A-205ENST00000394892 KLHL30-AS1Q8NEE0 82 aa6.9□□□□□ -1.3
ATG4A-205ENST00000394892 NPBQ8NG41 125 aa6.9□□□□□ -1.3
ATG4A-205ENST00000394892 OR8H1Q8NGG4 311 aa6.9□□□□□ -1.3
ATG4A-205ENST00000394892 IL1F10Q8WWZ1 152 aa6.9□□□□□ -1.3
ATG4A-205ENST00000394892 FAM3DQ96BQ1 224 aa6.9□□□□□ -1.3
ATG4A-205ENST00000394892 GALMQ96C23 342 aa6.9□□□□□ -1.3
ATG4A-205ENST00000394892 CNBD2Q96M20 576 aa6.9□□□□□ -1.3
ATG4A-205ENST00000394892 KCTD7Q96MP8 289 aa6.9□□□□□ -1.3
ATG4A-205ENST00000394892 B9D2Q9BPU9 175 aa6.9□□□□□ -1.3
ATG4A-205ENST00000394892 RASL11BQ9BPW5 248 aa6.9□□□□□ -1.3
ATG4A-205ENST00000394892 CCDC90BQ9GZT6 254 aa6.9□□□□□ -1.3
ATG4A-205ENST00000394892 GNB4Q9HAV0 340 aa6.9□□□□□ -1.3
ATG4A-205ENST00000394892 Q9N2K0 584 aa6.9□□□□□ -1.3
ATG4A-205ENST00000394892 ACOT13Q9NPJ3 140 aa6.9□□□□□ -1.3
ATG4A-205ENST00000394892 KCNIP1Q9NZI2 227 aa6.9□□□□□ -1.3
ATG4A-205ENST00000394892 SLC23A1Q9UHI7 598 aa6.9□□□□□ -1.3
ATG4A-205ENST00000394892 ZNF580Q9UK33 172 aa6.9□□□□□ -1.3
ATG4A-205ENST00000394892 ELF5Q9UKW6 265 aaPredicted RBP6.9□□□□□ -1.3
ATG4A-205ENST00000394892 RNF150Q9ULK6 438 aa6.9□□□□□ -1.3
ATG4A-205ENST00000394892 HSF4Q9ULV5 492 aa6.9□□□□□ -1.3
ATG4A-205ENST00000394892 GAB2Q9UQC2 676 aa6.9□□□□□ -1.3
ATG4A-205ENST00000394892 WSB1Q9Y6I7 421 aa6.9□□□□□ -1.3
ATG4A-205ENST00000394892 ERICH4A6NGS2 130 aa6.89□□□□□ -1.31
ATG4A-205ENST00000394892 H0YJW9 148 aa6.89□□□□□ -1.31
ATG4A-205ENST00000394892 CCL24O00175 119 aa6.89□□□□□ -1.31
ATG4A-205ENST00000394892 ATP6V0E1O15342 81 aa6.89□□□□□ -1.31
ATG4A-205ENST00000394892 IGLV1-40P01703 118 aa6.89□□□□□ -1.31
ATG4A-205ENST00000394892 HLA-DRB1P01911 266 aa6.89□□□□□ -1.31
ATG4A-205ENST00000394892 ELANEP08246 267 aa6.89□□□□□ -1.31
ATG4A-205ENST00000394892 NHLRC4P0CG21 123 aaPredicted RBP6.89□□□□□ -1.31
ATG4A-205ENST00000394892 ARSBP15848 533 aa6.89□□□□□ -1.31
ATG4A-205ENST00000394892 CDX1P47902 265 aaPredicted RBP6.89□□□□□ -1.31
ATG4A-205ENST00000394892 HLA-DRB3P79483 266 aa6.89□□□□□ -1.31
ATG4A-205ENST00000394892 SSBP2P81877 361 aaPredicted RBP6.89□□□□□ -1.31
ATG4A-205ENST00000394892 FHL3Q13643 280 aa6.89□□□□□ -1.31
ATG4A-205ENST00000394892 KIR2DS1Q14954 304 aa6.89□□□□□ -1.31
ATG4A-205ENST00000394892 RAB11BQ15907 218 aa6.89□□□□□ -1.31
ATG4A-205ENST00000394892 C5orf64Q2M2E5 130 aa6.89□□□□□ -1.31
ATG4A-205ENST00000394892 HES5Q5TA89 166 aa6.89□□□□□ -1.31
ATG4A-205ENST00000394892 FAM131AQ6UXB0 335 aa6.89□□□□□ -1.31
ATG4A-205ENST00000394892 COMMD1Q8N668 190 aa6.89□□□□□ -1.31
ATG4A-205ENST00000394892 ZNF383Q8NA42 475 aa6.89□□□□□ -1.31
ATG4A-205ENST00000394892 MINDY2Q8NBR6 621 aa6.89□□□□□ -1.31
ATG4A-205ENST00000394892 OR5AN1Q8NGI8 311 aa6.89□□□□□ -1.31
ATG4A-205ENST00000394892 MCRIP2Q9BUT9 160 aaKnown RBP6.89□□□□□ -1.31
ATG4A-205ENST00000394892 OR51J1Q9H342 316 aa6.89□□□□□ -1.31
ATG4A-205ENST00000394892 FBXL15Q9H469 300 aa6.89□□□□□ -1.31
ATG4A-205ENST00000394892 PLGRKTQ9HBL7 147 aa6.89□□□□□ -1.31
ATG4A-205ENST00000394892 PLEKHJ1Q9NW61 149 aa6.89□□□□□ -1.31
ATG4A-205ENST00000394892 SCOCQ9UIL1 159 aa6.89□□□□□ -1.31
ATG4A-205ENST00000394892 V9GY05 133 aa6.89□□□□□ -1.31
ATG4A-205ENST00000394892 IGKV1D-8A0A087WSZ0 117 aa6.88□□□□□ -1.31
ATG4A-205ENST00000394892 TRAV1-2A0A0B4J238 106 aa6.88□□□□□ -1.31
ATG4A-205ENST00000394892 SMIM30A4D0T7 59 aa6.88□□□□□ -1.31
ATG4A-205ENST00000394892 NUDT19A8MXV4 375 aa6.88□□□□□ -1.31
ATG4A-205ENST00000394892 I3L521 148 aa6.88□□□□□ -1.31
ATG4A-205ENST00000394892 RAB27BO00194 218 aa6.88□□□□□ -1.31
ATG4A-205ENST00000394892 ITGB1BP1O14713 200 aa6.88□□□□□ -1.31
ATG4A-205ENST00000394892 NBR2O15453 112 aa6.88□□□□□ -1.31
ATG4A-205ENST00000394892 IGKV1-16P04430 117 aa6.88□□□□□ -1.31
ATG4A-205ENST00000394892 CEACAM6P40199 344 aa6.88□□□□□ -1.31
ATG4A-205ENST00000394892 LUMP51884 338 aaPredicted RBP6.88□□□□□ -1.31
ATG4A-205ENST00000394892 GNB1P62873 340 aa6.88□□□□□ -1.31
ATG4A-205ENST00000394892 SLC35B1P78383 322 aa6.88□□□□□ -1.31
ATG4A-205ENST00000394892 CX3CL1P78423 397 aa6.88□□□□□ -1.31
ATG4A-205ENST00000394892 MRGPRG-AS1Q2M3A8 158 aa6.88□□□□□ -1.31
ATG4A-205ENST00000394892 ZNF367Q7RTV3 350 aa6.88□□□□□ -1.31
ATG4A-205ENST00000394892 ZNF491Q8N8L2 437 aa6.88□□□□□ -1.31
ATG4A-205ENST00000394892 DRAXINQ8NBI3 349 aaPredicted RBP6.88□□□□□ -1.31
ATG4A-205ENST00000394892 OR2AK2Q8NG84 335 aa6.88□□□□□ -1.31
ATG4A-205ENST00000394892 SETD6Q8TBK2 473 aa6.88□□□□□ -1.31
ATG4A-205ENST00000394892 CASTOR1Q8WTX7 329 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms