RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 CENPOQ9BU64 300 aa9.38□□□□□ -0.91
RFC4-202ENST00000392481 MRPL20Q9BYC9 149 aaKnown RBP9.38□□□□□ -0.91
RFC4-202ENST00000392481 PARP12Q9H0J9 701 aaKnown RBP9.38□□□□□ -0.91
RFC4-202ENST00000392481 RNF167Q9H6Y7 350 aa9.38□□□□□ -0.91
RFC4-202ENST00000392481 LIN7CQ9NUP9 197 aaKnown RBP9.38□□□□□ -0.91
RFC4-202ENST00000392481 OR1A1Q9P1Q5 309 aa9.38□□□□□ -0.91
RFC4-202ENST00000392481 A0A075B6Q4 140 aa9.37□□□□□ -0.91
RFC4-202ENST00000392481 IGKV1-6A0A0C4DH72 117 aa9.37□□□□□ -0.91
RFC4-202ENST00000392481 ADARB2-AS1A8MUL3 147 aa9.37□□□□□ -0.91
RFC4-202ENST00000392481 FABP7O15540 132 aa9.37□□□□□ -0.91
RFC4-202ENST00000392481 SCGNO76038 276 aa9.37□□□□□ -0.91
RFC4-202ENST00000392481 DIRAS3O95661 229 aa9.37□□□□□ -0.91
RFC4-202ENST00000392481 OPN1MWP04001 364 aa9.37□□□□□ -0.91
RFC4-202ENST00000392481 CLEC2LP0C7M8 214 aa9.37□□□□□ -0.91
RFC4-202ENST00000392481 OPN1MW2P0DN77 364 aa9.37□□□□□ -0.91
RFC4-202ENST00000392481 OPN1MW3P0DN78 364 aa9.37□□□□□ -0.91
RFC4-202ENST00000392481 SNRPBP14678 240 aaKnown RBP9.37□□□□□ -0.91
RFC4-202ENST00000392481 SCAND1P57086 179 aa9.37□□□□□ -0.91
RFC4-202ENST00000392481 MXD1Q05195 221 aa9.37□□□□□ -0.91
RFC4-202ENST00000392481 TCTEX1D4Q5JR98 221 aa9.37□□□□□ -0.91
RFC4-202ENST00000392481 SLC35E3Q7Z769 313 aa9.37□□□□□ -0.91
RFC4-202ENST00000392481 OR4X2Q8NGF9 303 aa9.37□□□□□ -0.91
RFC4-202ENST00000392481 LGALS14Q8TCE9 139 aa9.37□□□□□ -0.91
RFC4-202ENST00000392481 CHPT1Q8WUD6 406 aa9.37□□□□□ -0.91
RFC4-202ENST00000392481 ZNF251Q9BRH9 671 aa9.37□□□□□ -0.91
RFC4-202ENST00000392481 C11orf54Q9H0W9 315 aaPredicted RBP9.37□□□□□ -0.91
RFC4-202ENST00000392481 ABCG5Q9H222 651 aa9.37□□□□□ -0.91
RFC4-202ENST00000392481 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.37□□□□□ -0.91
RFC4-202ENST00000392481 PSMB11A5LHX3 300 aa9.36□□□□□ -0.91
RFC4-202ENST00000392481 TRIM64CA6NLI5 447 aa9.36□□□□□ -0.91
RFC4-202ENST00000392481 TMEM127O75204 238 aa9.36□□□□□ -0.91
RFC4-202ENST00000392481 TALDO1P37837 337 aa9.36□□□□□ -0.91
RFC4-202ENST00000392481 GPR12P47775 334 aa9.36□□□□□ -0.91
RFC4-202ENST00000392481 F2RL1P55085 397 aa9.36□□□□□ -0.91
RFC4-202ENST00000392481 ARFRP1Q13795 201 aa9.36□□□□□ -0.91
RFC4-202ENST00000392481 SRSF7Q16629 238 aaKnown RBP eCLIP9.36□□□□□ -0.912e-6■■■■□ 21.1
RFC4-202ENST00000392481 CDNFQ49AH0 187 aa9.36□□□□□ -0.91
RFC4-202ENST00000392481 Q6ZS49 121 aa9.36□□□□□ -0.91
RFC4-202ENST00000392481 FOXRED2Q8IWF2 684 aa9.36□□□□□ -0.91
RFC4-202ENST00000392481 FAM71E2Q8N5Q1 922 aa9.36□□□□□ -0.91
RFC4-202ENST00000392481 OR4F17Q8NGA8 305 aa9.36□□□□□ -0.91
RFC4-202ENST00000392481 ABHD14BQ96IU4 210 aa9.36□□□□□ -0.91
RFC4-202ENST00000392481 OR4F4Q96R69 305 aa9.36□□□□□ -0.91
RFC4-202ENST00000392481 RASL11BQ9BPW5 248 aa9.36□□□□□ -0.91
RFC4-202ENST00000392481 TOLLIPQ9H0E2 274 aa9.36□□□□□ -0.91
RFC4-202ENST00000392481 ETV7Q9Y603 341 aa9.36□□□□□ -0.91
RFC4-202ENST00000392481 TCRBV4S1A1TA0A5B7 111 aa9.35□□□□□ -0.91
RFC4-202ENST00000392481 AP4M1O00189 453 aa9.35□□□□□ -0.91
RFC4-202ENST00000392481 KCNAB3O43448 404 aa9.35□□□□□ -0.91
RFC4-202ENST00000392481 AIREO43918 545 aa9.35□□□□□ -0.91
RFC4-202ENST00000392481 GSTP1P09211 210 aaKnown RBP9.35□□□□□ -0.91
RFC4-202ENST00000392481 DTYMKP23919 212 aa9.35□□□□□ -0.91
RFC4-202ENST00000392481 ACTBP60709 375 aa9.35□□□□□ -0.91
RFC4-202ENST00000392481 RPL39P5Q59GN2 51 aa9.35□□□□□ -0.91
RFC4-202ENST00000392481 IDNKQ5T6J7 187 aa9.35□□□□□ -0.91
RFC4-202ENST00000392481 HACD4Q5VWC8 232 aa9.35□□□□□ -0.91
RFC4-202ENST00000392481 C10orf99Q6UWK7 81 aa9.35□□□□□ -0.91
RFC4-202ENST00000392481 PHF21AQ96BD5 680 aa9.35□□□□□ -0.91
RFC4-202ENST00000392481 R3HDM4Q96D70 268 aa9.35□□□□□ -0.91
RFC4-202ENST00000392481 YIPF6Q96EC8 236 aa9.35□□□□□ -0.91
RFC4-202ENST00000392481 NOL4LQ96MY1 436 aaPredicted RBP9.35□□□□□ -0.91
RFC4-202ENST00000392481 CABLES2Q9BTV7 478 aa9.35□□□□□ -0.91
RFC4-202ENST00000392481 RHBDL2Q9NX52 303 aa9.35□□□□□ -0.91
RFC4-202ENST00000392481 RDH8Q9NYR8 311 aa9.35□□□□□ -0.91
RFC4-202ENST00000392481 ZNF230Q9UIE0 474 aaPredicted RBP9.35□□□□□ -0.91
RFC4-202ENST00000392481 ZNF221Q9UK13 617 aa9.35□□□□□ -0.91
RFC4-202ENST00000392481 TSSC4Q9Y5U2 329 aaPredicted RBP9.35□□□□□ -0.91
RFC4-202ENST00000392481 PLXNB1O43157 2135 aa9.35□□□□□ -0.91
RFC4-202ENST00000392481 TRBV6-7A0A0A0MS04 114 aa9.34□□□□□ -0.91
RFC4-202ENST00000392481 OR5H14A6NHG9 310 aa9.34□□□□□ -0.91
RFC4-202ENST00000392481 LINC01548A6NM66 108 aa9.34□□□□□ -0.91
RFC4-202ENST00000392481 BET1O15155 118 aa9.34□□□□□ -0.91
RFC4-202ENST00000392481 GSTT2P0CG29 244 aa9.34□□□□□ -0.91
RFC4-202ENST00000392481 GSTT2BP0CG30 244 aa9.34□□□□□ -0.91
RFC4-202ENST00000392481 CT45A6P0DMU7 189 aa9.34□□□□□ -0.91
RFC4-202ENST00000392481 CT45A5P0DMU8 189 aa9.34□□□□□ -0.91
RFC4-202ENST00000392481 CT45A7P0DMV0 189 aa9.34□□□□□ -0.91
RFC4-202ENST00000392481 MC5RP33032 325 aa9.34□□□□□ -0.91
RFC4-202ENST00000392481 SOX6P35712 828 aa9.34□□□□□ -0.91
RFC4-202ENST00000392481 SLC35B1P78383 322 aa9.34□□□□□ -0.91
RFC4-202ENST00000392481 PITPNAQ00169 270 aa9.34□□□□□ -0.91
RFC4-202ENST00000392481 MMDQ15546 238 aa9.34□□□□□ -0.91
RFC4-202ENST00000392481 IGSF11Q5DX21 431 aa9.34□□□□□ -0.91
RFC4-202ENST00000392481 FAM131AQ6UXB0 335 aa9.34□□□□□ -0.91
RFC4-202ENST00000392481 ZNF329Q86UD4 541 aa9.34□□□□□ -0.91
RFC4-202ENST00000392481 CROCCP3Q8IVE0 287 aa9.34□□□□□ -0.91
RFC4-202ENST00000392481 STPG2Q8N412 459 aa9.34□□□□□ -0.91
RFC4-202ENST00000392481 COMMD1Q8N668 190 aa9.34□□□□□ -0.91
RFC4-202ENST00000392481 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.34□□□□□ -0.91
RFC4-202ENST00000392481 OR10J5Q8NHC4 309 aa9.34□□□□□ -0.91
RFC4-202ENST00000392481 RBMXL1Q96E39 390 aaKnown RBP9.34□□□□□ -0.91
RFC4-202ENST00000392481 DCSTAMPQ9H295 470 aa9.34□□□□□ -0.91
RFC4-202ENST00000392481 ELF5Q9UKW6 265 aaPredicted RBP9.34□□□□□ -0.91
RFC4-202ENST00000392481 RNF150Q9ULK6 438 aa9.34□□□□□ -0.91
RFC4-202ENST00000392481 A0A0A6YYH2 397 aa9.33□□□□□ -0.92
RFC4-202ENST00000392481 A0A1W2PRX2 142 aa9.33□□□□□ -0.92
RFC4-202ENST00000392481 A6NJ64 397 aa9.33□□□□□ -0.92
RFC4-202ENST00000392481 H0YJW9 148 aa9.33□□□□□ -0.92
RFC4-202ENST00000392481 PROP1O75360 226 aa9.33□□□□□ -0.92
RFC4-202ENST00000392481 PNLIPRP3Q17RR3 467 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms