RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 NUBP2Q9Y5Y2 271 aa13.61□□□□□ -0.23
PDLIM4-202ENST00000379018 TRAV8-7A0A075B6U6 113 aa13.6□□□□□ -0.23
PDLIM4-202ENST00000379018 LIMS3P0CW19 117 aa13.6□□□□□ -0.23
PDLIM4-202ENST00000379018 LIMS4P0CW20 117 aa13.6□□□□□ -0.23
PDLIM4-202ENST00000379018 MGMTP16455 207 aa13.6□□□□□ -0.23
PDLIM4-202ENST00000379018 ALDH3A2P51648 485 aa13.6□□□□□ -0.23
PDLIM4-202ENST00000379018 CRIP2P52943 208 aaPredicted RBP13.6□□□□□ -0.23
PDLIM4-202ENST00000379018 DEFA5Q01523 94 aa13.6□□□□□ -0.23
PDLIM4-202ENST00000379018 RCN1Q15293 331 aa13.6□□□□□ -0.23
PDLIM4-202ENST00000379018 ZFP1Q6P2D0 407 aa13.6□□□□□ -0.23
PDLIM4-202ENST00000379018 GTSCR1Q86UQ5 136 aa13.6□□□□□ -0.23
PDLIM4-202ENST00000379018 GRPEL2Q8TAA5 225 aa13.6□□□□□ -0.23
PDLIM4-202ENST00000379018 IFI27L2Q9H2X8 130 aa13.6□□□□□ -0.23
PDLIM4-202ENST00000379018 METTL1Q9UBP6 276 aaKnown RBP13.6□□□□□ -0.23
PDLIM4-202ENST00000379018 C13orf42A0A1B0GVH6 325 aa13.59□□□□□ -0.23
PDLIM4-202ENST00000379018 CASQ2O14958 399 aaPredicted RBP13.59□□□□□ -0.23
PDLIM4-202ENST00000379018 YPEL1O60688 119 aa13.59□□□□□ -0.23
PDLIM4-202ENST00000379018 CA2P00918 260 aa13.59□□□□□ -0.23
PDLIM4-202ENST00000379018 IGFBP3P17936 291 aaPredicted RBP13.59□□□□□ -0.23
PDLIM4-202ENST00000379018 FUT3P21217 361 aa13.59□□□□□ -0.23
PDLIM4-202ENST00000379018 ETV1P50549 477 aa13.59□□□□□ -0.23
PDLIM4-202ENST00000379018 GAPTQ8N292 157 aa13.59□□□□□ -0.23
PDLIM4-202ENST00000379018 CBR4Q8N4T8 237 aa13.59□□□□□ -0.23
PDLIM4-202ENST00000379018 ZFP41Q8N8Y5 198 aa13.59□□□□□ -0.23
PDLIM4-202ENST00000379018 GALMQ96C23 342 aa13.59□□□□□ -0.23
PDLIM4-202ENST00000379018 RHOVQ96L33 236 aa13.59□□□□□ -0.23
PDLIM4-202ENST00000379018 YPEL2Q96QA6 119 aa13.59□□□□□ -0.23
PDLIM4-202ENST00000379018 S100A14Q9HCY8 104 aa13.59□□□□□ -0.23
PDLIM4-202ENST00000379018 MBNL3Q9NUK0 354 aaKnown RBP13.59□□□□□ -0.23
PDLIM4-202ENST00000379018 RPL36Q9Y3U8 105 aaKnown RBP13.59□□□□□ -0.23
PDLIM4-202ENST00000379018 CA11O75493 328 aa13.58□□□□□ -0.24
PDLIM4-202ENST00000379018 ZP3P21754 424 aa13.58□□□□□ -0.24
PDLIM4-202ENST00000379018 SYNJ2BPP57105 145 aa13.58□□□□□ -0.24
PDLIM4-202ENST00000379018 CCDC58Q4VC31 144 aa13.58□□□□□ -0.24
PDLIM4-202ENST00000379018 SIGIRRQ6IA17 410 aa13.58□□□□□ -0.24
PDLIM4-202ENST00000379018 CD200R1LQ6Q8B3 271 aa13.58□□□□□ -0.24
PDLIM4-202ENST00000379018 RHOXF1Q8NHV9 184 aa13.58□□□□□ -0.24
PDLIM4-202ENST00000379018 SETD6Q8TBK2 473 aa13.58□□□□□ -0.24
PDLIM4-202ENST00000379018 SMIM19Q96E16 107 aa13.58□□□□□ -0.24
PDLIM4-202ENST00000379018 VCX3BQ9H321 246 aa13.58□□□□□ -0.24
PDLIM4-202ENST00000379018 SLA2Q9H6Q3 261 aa13.58□□□□□ -0.24
PDLIM4-202ENST00000379018 RANGRFQ9HD47 186 aaPredicted RBP13.58□□□□□ -0.24
PDLIM4-202ENST00000379018 STEAP1Q9UHE8 339 aa13.58□□□□□ -0.24
PDLIM4-202ENST00000379018 ADAM30Q9UKF2 790 aa13.58□□□□□ -0.24
PDLIM4-202ENST00000379018 PNMA8CA0A1B0GUJ8 204 aa13.57□□□□□ -0.24
PDLIM4-202ENST00000379018 H0Y980 276 aa13.57□□□□□ -0.24
PDLIM4-202ENST00000379018 PDCD6O75340 191 aa13.57□□□□□ -0.24
PDLIM4-202ENST00000379018 SC5DO75845 299 aa13.57□□□□□ -0.24
PDLIM4-202ENST00000379018 CT45A6P0DMU7 189 aa13.57□□□□□ -0.24
PDLIM4-202ENST00000379018 CT45A5P0DMU8 189 aa13.57□□□□□ -0.24
PDLIM4-202ENST00000379018 CT45A7P0DMV0 189 aa13.57□□□□□ -0.24
PDLIM4-202ENST00000379018 HTD2P86397 168 aa13.57□□□□□ -0.24
PDLIM4-202ENST00000379018 SMN1Q16637 294 aaKnown RBP13.57□□□□□ -0.24
PDLIM4-202ENST00000379018 DMKNQ6E0U4 476 aaPredicted RBP13.57□□□□□ -0.24
PDLIM4-202ENST00000379018 TMPRSS11AQ6ZMR5 421 aa13.57□□□□□ -0.24
PDLIM4-202ENST00000379018 OR5T1Q8NG75 326 aa13.57□□□□□ -0.24
PDLIM4-202ENST00000379018 GHSRQ92847 366 aa13.57□□□□□ -0.24
PDLIM4-202ENST00000379018 ABHD14BQ96IU4 210 aa13.57□□□□□ -0.24
PDLIM4-202ENST00000379018 Q96M66 194 aa13.57□□□□□ -0.24
PDLIM4-202ENST00000379018 KRTAP17-1Q9BYP8 105 aa13.57□□□□□ -0.24
PDLIM4-202ENST00000379018 PLEKHA3Q9HB20 300 aa13.57□□□□□ -0.24
PDLIM4-202ENST00000379018 BATF3Q9NR55 127 aa13.57□□□□□ -0.24
PDLIM4-202ENST00000379018 ABRACLQ9P1F3 81 aa13.57□□□□□ -0.24
PDLIM4-202ENST00000379018 WASHC3Q9Y3C0 194 aa13.57□□□□□ -0.24
PDLIM4-202ENST00000379018 TRBV5-5A0A0J9YX44 114 aa13.56□□□□□ -0.24
PDLIM4-202ENST00000379018 OR5H14A6NHG9 310 aa13.56□□□□□ -0.24
PDLIM4-202ENST00000379018 H0YJW9 148 aa13.56□□□□□ -0.24
PDLIM4-202ENST00000379018 ARPC1BO15143 372 aaKnown RBP13.56□□□□□ -0.24
PDLIM4-202ENST00000379018 LALBAP00709 142 aa13.56□□□□□ -0.24
PDLIM4-202ENST00000379018 TFAP2AP05549 437 aa13.56□□□□□ -0.24
PDLIM4-202ENST00000379018 Q499Y3 187 aa13.56□□□□□ -0.24
PDLIM4-202ENST00000379018 AKIRIN2Q53H80 203 aa13.56□□□□□ -0.24
PDLIM4-202ENST00000379018 OR9G4Q8NGQ1 327 aa13.56□□□□□ -0.24
PDLIM4-202ENST00000379018 APH1BQ8WW43 257 aa13.56□□□□□ -0.24
PDLIM4-202ENST00000379018 OR14A2Q96R54 314 aa13.56□□□□□ -0.24
PDLIM4-202ENST00000379018 PARP12Q9H0J9 701 aaKnown RBP13.56□□□□□ -0.24
PDLIM4-202ENST00000379018 CHMP1AQ9HD42 196 aaPredicted RBP13.56□□□□□ -0.24
PDLIM4-202ENST00000379018 PIPOXQ9P0Z9 390 aa13.56□□□□□ -0.24
PDLIM4-202ENST00000379018 ALMS1Q8TCU4 4167 aa13.56□□□□□ -0.24
PDLIM4-202ENST00000379018 IZUMO1RA6ND01 250 aa13.55□□□□□ -0.24
PDLIM4-202ENST00000379018 FAM90A7PA6NKC0 464 aa13.55□□□□□ -0.24
PDLIM4-202ENST00000379018 FAM90A23PA8MXZ1 464 aa13.55□□□□□ -0.24
PDLIM4-202ENST00000379018 RAB29O14966 203 aa13.55□□□□□ -0.24
PDLIM4-202ENST00000379018 FXYD3Q14802 87 aa13.55□□□□□ -0.24
PDLIM4-202ENST00000379018 PSG5Q15238 335 aa13.55□□□□□ -0.24
PDLIM4-202ENST00000379018 HMGN3Q15651 99 aa13.55□□□□□ -0.24
PDLIM4-202ENST00000379018 LCN12Q6JVE5 192 aa13.55□□□□□ -0.24
PDLIM4-202ENST00000379018 POC5Q8NA72 575 aa13.55□□□□□ -0.24
PDLIM4-202ENST00000379018 DRAXINQ8NBI3 349 aaPredicted RBP13.55□□□□□ -0.24
PDLIM4-202ENST00000379018 IL17DQ8TAD2 202 aa13.55□□□□□ -0.24
PDLIM4-202ENST00000379018 SULT4A1Q9BR01 284 aa13.55□□□□□ -0.24
PDLIM4-202ENST00000379018 CEPT1Q9Y6K0 416 aa13.55□□□□□ -0.24
PDLIM4-202ENST00000379018 OGG1O15527 345 aa13.54□□□□□ -0.24
PDLIM4-202ENST00000379018 CPEP16870 476 aa13.54□□□□□ -0.24
PDLIM4-202ENST00000379018 CAPGP40121 348 aa13.54□□□□□ -0.24
PDLIM4-202ENST00000379018 RPS16P62249 146 aaKnown RBP13.54□□□□□ -0.24
PDLIM4-202ENST00000379018 C6orf141Q5SZD1 244 aa13.54□□□□□ -0.24
PDLIM4-202ENST00000379018 FAM71F2Q6NXP2 309 aa13.54□□□□□ -0.24
PDLIM4-202ENST00000379018 ZNF554Q86TJ5 538 aa13.54□□□□□ -0.24
PDLIM4-202ENST00000379018 NEDD4LQ96PU5 975 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms